Os12g0263800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-).
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Os12g0263800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.5 | 0.35 | 9.83 | -0.286 | 0.337 | -1.36 | -0.698 | -0.815 | 0.198 | 21.1 | 24.8 | 816 | -- | -- |
| 55.46 | 0.347 | 9.86 | -0.451 | 0.428 | -1.31 | -0.62 | -- | 0.145 | 20.6 | 25.7 | 1109 | -- | -- |
| 56.27 | 0.349 | 9.85 | -0.337 | 0.426 | -1.36 | -- | -0.451 | 0.175 | 20.5 | 25.22 | 1106 | -- | -- |
| 56.42 | 0.35 | 9.86 | -0.426 | 0.422 | -1.32 | -- | -- | 0.145 | 20.5 | 25.7 | 1097 | -- | -- |
| 61.36 | 0.365 | 9.85 | -0.419 | -- | -1.45 | -- | -0.153 | 0.132 | -- | 26.92 | 719 | -- | -- |
| 80.18 | 0.42 | 9.8 | -0.0589 | 0.506 | -- | -0.559 | -- | 0.433 | 21.6 | -- | -- | -- | -- |
| 81.34 | 0.422 | 9.8 | -0.0377 | 0.509 | -- | -- | -- | 0.434 | 21.5 | -- | -- | -- | -- |
| 61.35 | 0.365 | 9.85 | -0.447 | -- | -1.44 | -- | -- | 0.113 | -- | 26.98 | 731 | -- | -- |
| 60.55 | 0.362 | 9.84 | -- | 0.433 | -1.12 | -- | -- | 0.234 | 20.6 | 25.8 | 1081 | -- | -- |
| 96.59 | 0.459 | 9.78 | -0.0342 | -- | -- | -- | -- | 0.432 | -- | -- | -- | -- | -- |
| 81.38 | 0.422 | 9.8 | -- | 0.509 | -- | -- | -- | 0.438 | 21.5 | -- | -- | -- | -- |
| 66.02 | 0.378 | 9.84 | -- | -- | -1.27 | -- | -- | 0.197 | -- | 27.04 | 718 | -- | -- |
| 96.62 | 0.459 | 9.78 | -- | -- | -- | -- | -- | 0.436 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.31 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 17 |
| 12 | 54.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 79 | 55.16 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 85 | 55.22 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 122 | 55.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 7 |
| 147 | 55.41 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 22 |
| 182 | 55.50 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 189 | 55.52 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 222 | 55.60 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 235 | 55.62 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 257 | 55.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 5 |
| 278 | 55.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 345 | 55.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 411 | 55.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 566 | 56.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 23 |