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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0257900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Receptor-like kinase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.12 (0.0286) R2 : 0.0095
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.126 (0.0601) R2dN8 : 0.0123 R2N8 : 0.0095
σ : 0.538
deviance : 132.72
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
127.26 0.53 3.14 -0.0476 0.0912 -0.393 0.0686 1.73 0.121 14.7 1.1 11 -- --
130.19 0.531 3.12 0.0247 0.0731 -0.312 0.281 -- 0.134 14.8 1.063 15 -- --
127.2 0.525 3.14 -0.0442 0.091 -0.386 -- 1.79 0.121 14.5 1.1 10 -- --
130.45 0.532 3.12 0.0306 0.0728 -0.301 -- -- 0.136 13.6 1.08 15 -- --
127.6 0.526 3.14 -0.0446 -- -0.339 -- 1.76 0.118 -- 1.11 10 -- --
132.15 0.539 3.12 0.0676 0.0464 -- -0.378 -- 0.131 5.83 -- -- -- --
132.43 0.539 3.12 0.066 0.0557 -- -- -- 0.132 8.28 -- -- -- --
130.74 0.533 3.12 0.0321 -- -0.267 -- -- 0.134 -- 1.082 15 -- --
130.47 0.532 3.12 -- 0.073 -0.305 -- -- 0.133 13.6 1.067 15 -- --
132.61 0.538 3.12 0.0664 -- -- -- -- 0.133 -- -- -- -- --
132.55 0.539 3.12 -- 0.0561 -- -- -- 0.125 8.2 -- -- -- --
130.77 0.533 3.12 -- -- -0.271 -- -- 0.131 -- 1.07 15 -- --
132.72 0.538 3.12 -- -- -- -- -- 0.126 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 119.92 radiation 1.0 43200 < th dose dependent rect. 3 1
2 119.93 wind 3.0 90 < th dose dependent rect. 2 1
3 120.01 temperature 15.0 90 > th dose dependent rect. 2 1
4 120.11 wind 1.0 10 < th dose independent rect. 2 2
6 120.37 wind 3.0 10 < th dose dependent rect. 2 2
8 120.46 wind 9.0 30 < th dose independent rect. 3 23
16 120.86 wind 3.0 90 < th dose independent rect. 2 1
20 120.89 temperature 10.0 30 > th dose dependent rect. 3 23
21 120.90 temperature 25.0 90 > th dose independent rect. 2 1
28 120.95 wind 9.0 1440 < th dose independent rect. 3 1
29 120.95 temperature 10.0 1440 > th dose independent rect. 3 1
32 120.95 temperature 30.0 1440 < th dose independent rect. 3 1
36 120.95 humidity 50.0 1440 > th dose independent rect. 3 1
45 120.95 atmosphere 995.0 1440 > th dose independent rect. 3 1
46 120.95 radiation 1.0 1440 < th dose independent rect. 3 1
66 120.95 temperature 10.0 1440 > th dose independent rect. 4 23
69 120.95 radiation 1.0 1440 < th dose dependent rect. 3 1
82 121.05 atmosphere 1005.0 30 > th dose dependent rect. 2 1
88 121.11 atmosphere 1005.0 30 > th dose independent rect. 2 1
91 121.13 precipitation 0.1 30 < th dose independent rect. 3 23
94 121.13 precipitation 0.1 30 < th dose dependent rect. 3 23
103 121.19 humidity 80.0 30 > th dose independent rect. 2 1
104 121.19 humidity 70.0 30 > th dose dependent rect. 2 1
106 121.20 temperature 10.0 30 > th dose independent rect. 2 1
108 121.20 temperature 30.0 30 < th dose independent rect. 2 1
109 121.20 humidity 50.0 30 > th dose independent rect. 2 1
113 121.20 atmosphere 995.0 30 > th dose independent rect. 2 1
115 121.20 atmosphere 1010.0 30 < th dose independent rect. 2 1
117 121.20 radiation 1.0 30 < th dose independent rect. 2 1
122 121.20 precipitation 0.1 30 < th dose independent rect. 2 1
123 121.20 temperature 10.0 30 > th dose independent rect. 3 23
124 121.20 atmosphere 995.0 30 > th dose independent rect. 3 23
125 121.20 humidity 50.0 30 > th dose dependent rect. 2 1
128 121.20 radiation 1.0 30 < th dose dependent rect. 2 1
133 121.20 precipitation 0.1 30 < th dose dependent rect. 2 1
138 121.32 atmosphere 1015.0 30 < th dose dependent rect. 2 1
146 121.43 temperature 30.0 30 < th dose dependent rect. 2 1
148 121.48 wind 1.0 30 > th dose independent rect. 2 1
226 121.90 humidity 50.0 10 > th dose independent rect. 3 23
267 123.38 temperature 20.0 10 < th dose dependent rect. 7 9
285 123.55 temperature 20.0 10 < th dose dependent rect. 7 6
289 123.57 temperature 20.0 90 < th dose dependent rect. 6 13
338 124.23 wind 9.0 30 < th dose dependent rect. 4 22
340 124.27 wind 1.0 10 < th dose independent rect. 15 13
342 124.29 wind 1.0 10 < th dose independent rect. 17 11
347 124.33 wind 1.0 10 < th dose independent rect. 21 7
355 124.46 temperature 15.0 30 > th dose dependent rect. 4 16
360 124.54 temperature 20.0 10 < th dose independent rect. 7 6
366 124.63 temperature 20.0 10 < th dose independent rect. 7 9
380 124.69 temperature 20.0 90 < th dose independent rect. 7 9
399 124.77 temperature 20.0 90 < th dose independent rect. 6 13
411 124.81 temperature 10.0 720 > th dose dependent rect. 3 12
440 124.91 atmosphere 1015.0 720 < th dose independent rect. 3 16
445 124.98 wind 1.0 10 > th dose independent rect. 23 11
461 125.07 wind 7.0 90 < th dose independent rect. 4 15
496 125.14 wind 5.0 10 > th dose independent rect. 8 1
500 125.14 wind 5.0 10 > th dose dependent rect. 8 1
511 125.20 humidity 50.0 720 > th dose dependent rect. 2 1
514 125.21 temperature 25.0 90 < th dose dependent sin 23 NA
521 125.22 radiation 1.0 720 > th dose independent rect. 14 1
555 125.25 wind 1.0 10 > th dose independent rect. 21 23
559 125.27 humidity 50.0 10 > th dose independent rect. 14 12
560 125.27 radiation 40.0 10 < th dose independent rect. 14 12
562 125.28 atmosphere 1000.0 10 > th dose independent rect. 2 12
565 125.28 temperature 10.0 720 > th dose dependent rect. 14 1
569 125.30 radiation 1.0 720 < th dose dependent rect. 18 9
573 125.32 wind 9.0 10 < th dose independent rect. 14 12
575 125.33 wind 9.0 720 < th dose dependent rect. 2 1
578 125.38 temperature 10.0 30 > th dose dependent rect. 21 23
606 125.41 temperature 10.0 10 > th dose independent rect. 2 12
608 125.41 temperature 10.0 10 > th dose independent rect. 14 12
610 125.41 atmosphere 995.0 10 > th dose independent rect. 14 12
611 125.41 atmosphere 1015.0 10 < th dose independent rect. 2 12
612 125.41 wind 7.0 270 < th dose independent rect. 4 13
622 125.42 wind 1.0 10 < th dose independent rect. 8 20
623 125.42 precipitation 0.1 720 < th dose independent rect. 3 23
627 125.42 precipitation 0.1 720 < th dose dependent rect. 3 23
644 125.48 temperature 30.0 30 < th dose independent rect. 2 12
648 125.49 temperature 25.0 720 > th dose independent rect. 4 11
657 125.52 wind 1.0 10 < th dose independent rect. 6 22
669 125.59 wind 1.0 10 < th dose independent rect. 2 11
670 125.59 precipitation 0.1 10 < th dose independent rect. 14 12
671 125.59 precipitation 0.1 10 < th dose dependent rect. 14 12
672 125.59 wind 9.0 90 < th dose dependent rect. 4 15
684 125.63 precipitation 0.1 720 < th dose independent rect. 3 16
685 125.63 atmosphere 995.0 720 > th dose independent rect. 15 23
686 125.63 precipitation 0.1 720 < th dose dependent rect. 3 16
687 125.64 temperature 25.0 720 > th dose independent rect. 7 8
691 125.64 temperature 30.0 30 < th dose independent rect. 14 12
700 125.66 wind 1.0 10 > th dose independent rect. 23 21
701 125.66 atmosphere 995.0 720 > th dose independent rect. 3 23
703 125.67 temperature 30.0 720 < th dose independent rect. 15 6
704 125.67 radiation 1.0 720 < th dose independent rect. 18 9
711 125.71 wind 9.0 720 < th dose independent rect. 14 1
713 125.72 wind 1.0 720 > th dose independent rect. 14 1
720 125.73 atmosphere 995.0 720 > th dose independent rect. 14 1
723 125.74 temperature 10.0 720 > th dose independent rect. 14 1
729 125.74 atmosphere 1015.0 720 < th dose independent rect. 14 1
737 125.74 temperature 10.0 720 > th dose independent rect. 15 23
745 125.76 precipitation 0.1 720 < th dose independent rect. 14 1
746 125.76 precipitation 0.1 30 < th dose independent rect. 2 12
749 125.76 precipitation 0.1 720 < th dose dependent rect. 14 1
750 125.76 precipitation 0.1 30 < th dose dependent rect. 2 12
754 125.78 temperature 10.0 1440 > th dose independent rect. 3 12
757 125.78 temperature 10.0 1440 > th dose independent rect. 15 12
763 125.79 precipitation 0.1 720 < th dose independent rect. 7 8
765 125.79 precipitation 0.1 720 < th dose dependent rect. 7 8
768 125.81 atmosphere 1015.0 720 < th dose independent rect. 3 6
775 125.83 atmosphere 995.0 720 > th dose dependent rect. 2 1
791 125.88 temperature 30.0 720 < th dose dependent rect. 11 1
795 125.91 humidity 50.0 14400 > th dose independent rect. 14 1
796 125.91 atmosphere 1015.0 720 < th dose independent rect. 3 8
797 125.91 atmosphere 1010.0 10 < th dose independent rect. 4 22
800 125.92 wind 1.0 720 > th dose independent rect. 15 7
811 125.94 humidity 50.0 14400 > th dose independent rect. 13 3
813 125.95 precipitation 0.1 720 < th dose independent rect. 2 1
815 125.95 radiation 40.0 30 < th dose independent rect. 3 23
817 125.95 precipitation 0.1 720 < th dose dependent rect. 2 1
818 125.95 temperature 30.0 720 < th dose dependent rect. 9 4
823 125.96 atmosphere 995.0 30 > th dose dependent rect. 2 12
835 125.99 humidity 50.0 30 > th dose independent rect. 2 12
847 126.01 temperature 30.0 90 < th dose dependent rect. 1 22
865 126.05 wind 9.0 720 < th dose independent rect. 21 18
873 126.08 temperature 10.0 720 > th dose independent rect. 7 8
874 126.08 atmosphere 1015.0 720 < th dose independent rect. 7 8
875 126.08 temperature 10.0 720 > th dose independent rect. 15 16
882 126.09 temperature 10.0 720 > th dose dependent rect. 3 6
886 126.10 temperature 30.0 720 < th dose independent rect. 18 9
896 126.13 precipitation 0.1 720 < th dose independent rect. 19 8
897 126.13 precipitation 0.1 720 < th dose dependent rect. 19 8
904 126.15 humidity 50.0 14400 > th dose independent rect. 4 12
905 126.15 humidity 50.0 14400 > th dose independent rect. 24 16
907 126.16 wind 1.0 10 > th dose independent sin 8 NA
927 126.17 atmosphere 995.0 720 > th dose independent rect. 15 16
928 126.18 atmosphere 1015.0 1440 < th dose independent rect. 3 1
942 126.21 temperature 10.0 720 > th dose independent rect. 19 8
944 126.21 humidity 50.0 720 > th dose independent rect. 19 8
945 126.21 atmosphere 995.0 720 > th dose independent rect. 19 8
951 126.21 temperature 10.0 720 > th dose independent rect. 3 16
960 126.21 radiation 40.0 10 < th dose dependent rect. 14 12
962 126.22 temperature 25.0 30 > th dose independent rect. 23 21
965 126.23 wind 9.0 720 < th dose independent rect. 7 8
967 126.23 temperature 30.0 720 < th dose independent rect. 1 20
976 126.24 precipitation 0.1 720 < th dose independent rect. 21 18
978 126.24 precipitation 0.1 720 < th dose dependent rect. 21 18