Os12g0256600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0256600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.01 | 0.425 | 9.01 | 0.0353 | 0.821 | -0.963 | -1.04 | 1.17 | 0.0403 | 16 | 28.5 | 1231 | -- | -- |
| 82.38 | 0.423 | 9.04 | -0.138 | 0.87 | -0.862 | -1.02 | -- | 0.0129 | 15.9 | 28.41 | 1204 | -- | -- |
| 84.83 | 0.429 | 9.02 | -0.0582 | 0.829 | -0.939 | -- | 0.853 | 0.031 | 16.3 | 28.49 | 1163 | -- | -- |
| 84.96 | 0.429 | 9.03 | -0.223 | 0.843 | -0.849 | -- | -- | 0.0222 | 16.3 | 28.5 | 1152 | -- | -- |
| 120.65 | 0.512 | 9.02 | -0.0737 | -- | -1.03 | -- | 0.569 | 0.0412 | -- | 27.73 | 1221 | -- | -- |
| 114.11 | 0.501 | 9.02 | -0.432 | 0.922 | -- | -0.867 | -- | 0.0971 | 15.7 | -- | -- | -- | -- |
| 116.34 | 0.505 | 9.02 | -0.445 | 0.92 | -- | -- | -- | 0.0922 | 15.8 | -- | -- | -- | -- |
| 120.78 | 0.512 | 9.02 | -0.198 | -- | -0.974 | -- | -- | 0.0311 | -- | 27.69 | 1217 | -- | -- |
| 86.11 | 0.432 | 9.03 | -- | 0.838 | -0.886 | -- | -- | 0.0445 | 16.3 | 28.33 | 1157 | -- | -- |
| 163 | 0.597 | 9.02 | -0.483 | -- | -- | -- | -- | 0.0677 | -- | -- | -- | -- | -- |
| 121.56 | 0.516 | 9.01 | -- | 0.929 | -- | -- | -- | 0.142 | 15.8 | -- | -- | -- | -- |
| 121.73 | 0.514 | 9.02 | -- | -- | -1.01 | -- | -- | 0.068 | -- | 27.39 | 1229 | -- | -- |
| 169.16 | 0.607 | 9 | -- | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.73 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 2 | 75.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 17 |
| 13 | 77.09 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 14 | 77.17 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 15 | 77.19 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 19 | 77.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 23 | 77.56 | humidity | 70.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 28 | 77.77 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 33 | 78.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 41 | 78.44 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 42 | 78.48 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 10 |
| 43 | 78.54 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 65 | 79.54 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 86 | 80.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 119 | 80.88 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 5 |
| 124 | 80.93 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 157 | 81.36 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 13 |
| 160 | 81.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 13 | 13 |
| 164 | 81.43 | humidity | 70.0 | 90 | > th | dose independent | rect. | 13 | 14 |
| 168 | 81.45 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 11 |
| 197 | 81.78 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 19 |
| 201 | 81.86 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 13 | 13 |
| 226 | 82.11 | wind | 7.0 | 30 | < th | dose dependent | rect. | 3 | 6 |
| 231 | 82.15 | humidity | 70.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 282 | 82.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 16 |
| 283 | 82.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 289 | 82.75 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 305 | 82.97 | wind | 3.0 | 30 | < th | dose independent | rect. | 3 | 6 |
| 322 | 83.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 323 | 83.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 324 | 83.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 11 | 14 |
| 335 | 83.17 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 345 | 83.26 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 365 | 83.42 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 6 |
| 366 | 83.42 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 385 | 83.57 | humidity | 70.0 | 90 | > th | dose independent | rect. | 11 | 16 |
| 398 | 83.66 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 403 | 83.69 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 419 | 83.82 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 14 |
| 427 | 83.86 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 442 | 83.95 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 10 |
| 469 | 84.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 470 | 84.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 478 | 84.13 | temperature | 30.0 | 720 | < th | dose independent | sin | 16 | NA |
| 483 | 84.14 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 515 | 84.25 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 522 | 84.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 524 | 84.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 526 | 84.30 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 554 | 84.34 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 564 | 84.39 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 566 | 84.39 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 575 | 84.43 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 588 | 84.48 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 18 |
| 591 | 84.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 604 | 84.52 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 21 |
| 618 | 84.55 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 668 | 84.70 | temperature | 30.0 | 720 | < th | dose independent | sin | 11 | NA |
| 673 | 84.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 696 | 84.79 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 700 | 84.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 730 | 84.93 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 8 |
| 736 | 84.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 742 | 84.96 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 746 | 84.97 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 750 | 84.97 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 752 | 84.97 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 756 | 84.97 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 758 | 84.97 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 761 | 84.97 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 18 |
| 770 | 85.00 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 775 | 85.01 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 779 | 85.03 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 780 | 85.03 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 785 | 85.04 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 794 | 85.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 796 | 85.06 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 797 | 85.06 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 800 | 85.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 805 | 85.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 812 | 85.06 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 814 | 85.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 961 | 85.20 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 992 | 85.22 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 993 | 85.22 | temperature | 30.0 | 1440 | > th | dose dependent | no | NA | NA |