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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0256000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.34 (0.0377) R2 : 0.929
β1 : 1.16 (0.138) R2dD : 0.0115 R2D : 0.000194
β2 : 5.45 (0.129) R2dC : 0.493 R2C : 0.794
β3 : -2.73 (0.132) R2dE : 0.114 R2E : 0.419
β4 : 3.33 (0.439) R2dD*C : 0.00727 R2D*C : 0.00914
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.571 (0.0803) R2dN8 : 0.0104 R2N8 : -0.000518
σ : 0.704
deviance : 228.18
__
_____
C
peak time of C : 19
E
wheather : temperature
threshold : 15.8
memory length : 280
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 17.1
open length of G : 18

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
226.42 0.707 6.34 1.13 5.54 -2.63 4.04 1.55 0.558 19 15.3 281 17.1 18
228.18 0.704 6.34 1.16 5.45 -2.73 3.33 -- 0.571 19 15.8 280 17.1 18
248.75 0.735 6.36 1.03 5.58 -2.56 -- -0.609 0.559 18.9 16.3 265 17.3 18
248.69 0.734 6.35 1.11 5.52 -2.58 -- -- 0.583 18.9 16.6 256 17.4 17.8
459.79 0.999 6.22 2.39 -- -6.52 -- 0.653 0.426 -- 14.4 580 16.3 18.4
350.14 0.877 6.37 0.962 7.37 -- 2.64 -- 0.592 18.4 -- -- -- --
367.23 0.897 6.37 0.93 7.38 -- -- -- 0.602 18.4 -- -- -- --
348.47 0.869 6.21 1.06 -- -6.9 -- -- 0.544 -- 14.23 621 16.5 17.3
280.21 0.78 6.36 -- 5.57 -2.42 -- -- 0.492 18.9 16.66 259 17.5 17.6
3197.99 2.64 6.23 0.736 -- -- -- -- 0.444 -- -- -- -- --
390.04 0.924 6.39 -- 7.37 -- -- -- 0.498 18.4 -- -- -- --
357.99 0.881 6.24 -- -- -6.84 -- -- 0.466 -- 14.36 598 16.6 17.2
3212.29 2.65 6.25 -- -- -- -- -- 0.362 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 228.90 temperature 15.0 270 > th dose independent rect. 17 18
5 242.39 temperature 15.0 270 > th dose independent rect. 7 15
16 250.77 temperature 15.0 270 > th dose independent rect. 17 6
17 250.95 precipitation 0.1 270 < th dose independent rect. 17 18
18 250.95 precipitation 0.1 270 < th dose dependent rect. 17 18
19 251.34 wind 1.0 270 > th dose independent rect. 11 6
20 252.06 humidity 80.0 10 < th dose independent rect. 8 6
21 252.24 wind 9.0 270 < th dose independent rect. 17 18
22 252.32 humidity 50.0 270 > th dose independent rect. 17 18
23 252.45 radiation 10.0 90 > th dose independent rect. 8 6
24 252.65 humidity 90.0 10 < th dose dependent rect. 20 18
25 252.84 temperature 10.0 270 > th dose independent rect. 11 6
26 252.84 atmosphere 1015.0 270 < th dose independent rect. 11 6
28 253.19 temperature 10.0 90 > th dose dependent rect. 19 18
30 253.53 wind 9.0 270 < th dose independent rect. 11 6
33 253.89 precipitation 0.1 270 < th dose independent rect. 11 6
34 253.89 precipitation 0.1 270 < th dose dependent rect. 11 6
36 254.18 temperature 15.0 270 > th dose independent rect. 17 8
37 254.21 atmosphere 995.0 270 > th dose independent rect. 11 6
41 254.83 atmosphere 995.0 270 > th dose independent rect. 17 18
55 257.05 radiation 10.0 10 > th dose independent rect. 8 6
63 257.84 temperature 15.0 10 > th dose dependent rect. 8 6
65 258.02 humidity 80.0 10 < th dose independent rect. 20 18
72 259.03 humidity 70.0 90 > th dose dependent rect. 23 18
89 259.43 humidity 50.0 90 > th dose dependent rect. 23 10
90 259.45 radiation 40.0 270 < th dose dependent rect. 22 9
97 259.93 temperature 10.0 270 > th dose dependent rect. 5 7
100 260.24 humidity 70.0 270 > th dose independent rect. 22 9
101 260.28 wind 9.0 270 < th dose independent rect. 22 9
102 260.29 radiation 30.0 270 < th dose independent rect. 22 9
103 260.30 temperature 10.0 270 > th dose independent rect. 22 9
104 260.30 temperature 30.0 270 < th dose independent rect. 22 9
105 260.30 humidity 50.0 270 > th dose independent rect. 22 9
107 260.30 atmosphere 995.0 270 > th dose independent rect. 22 9
111 260.53 humidity 50.0 10 > th dose dependent rect. 2 16
112 260.56 temperature 20.0 270 > th dose independent rect. 6 6
120 261.13 humidity 60.0 10 > th dose dependent rect. 24 17
122 261.17 temperature 10.0 10 > th dose dependent rect. 20 18
127 261.32 wind 9.0 270 < th dose independent rect. 7 15
129 261.35 temperature 20.0 90 > th dose independent rect. 8 5
159 262.11 temperature 20.0 10 > th dose independent rect. 8 6
162 262.12 humidity 50.0 90 > th dose dependent rect. 1 16
165 262.19 temperature 10.0 270 > th dose dependent rect. 6 5
166 262.21 precipitation 0.1 270 < th dose independent rect. 7 15
167 262.21 precipitation 0.1 270 < th dose dependent rect. 7 15
188 262.83 wind 1.0 90 > th dose independent rect. 13 6
189 262.89 radiation 40.0 90 < th dose independent rect. 11 8
202 263.26 atmosphere 1015.0 270 < th dose independent rect. 7 15
203 263.32 atmosphere 995.0 270 > th dose dependent rect. 11 6
218 263.58 temperature 20.0 270 > th dose independent rect. 9 1
226 263.91 radiation 10.0 270 < th dose dependent rect. 22 16
271 264.76 humidity 80.0 10 < th dose independent rect. 4 10
278 264.92 radiation 1.0 270 > th dose independent rect. 6 5
287 265.05 precipitation 0.1 270 < th dose independent rect. 22 9
288 265.05 precipitation 0.1 270 < th dose dependent rect. 22 9
309 265.60 humidity 60.0 10 > th dose dependent sin 4 NA
311 265.63 radiation 40.0 10 < th dose independent rect. 12 20
313 265.65 temperature 15.0 10 > th dose dependent rect. 6 8
331 266.04 radiation 30.0 90 < th dose dependent rect. 23 20
337 266.16 radiation 40.0 10 < th dose dependent rect. 13 19
374 267.02 radiation 1.0 270 < th dose independent rect. 22 18
391 267.14 humidity 50.0 270 > th dose independent rect. 17 6
395 267.18 humidity 90.0 10 < th dose dependent rect. 8 6
413 267.29 humidity 90.0 10 < th dose dependent rect. 1 13
443 267.85 radiation 20.0 270 < th dose independent rect. 17 6
446 267.85 temperature 10.0 270 > th dose independent rect. 23 18
451 267.98 radiation 20.0 10 < th dose dependent sin 2 NA
460 268.09 wind 9.0 270 < th dose dependent rect. 6 6
461 268.11 radiation 40.0 270 < th dose dependent rect. 17 6
473 268.21 temperature 30.0 270 < th dose independent rect. 17 18
477 268.26 wind 9.0 270 < th dose independent rect. 17 6
482 268.29 humidity 90.0 10 < th dose dependent rect. 6 8
486 268.39 precipitation 0.1 270 < th dose independent rect. 16 21
487 268.39 precipitation 0.1 270 < th dose dependent rect. 16 21
514 268.57 atmosphere 1010.0 270 < th dose independent rect. 17 6
531 268.67 atmosphere 1015.0 270 < th dose independent rect. 23 18
544 268.93 atmosphere 995.0 270 > th dose independent rect. 23 18
545 268.95 radiation 1.0 270 > th dose independent rect. 11 6
547 268.96 radiation 20.0 270 < th dose independent rect. 16 9
571 269.11 temperature 30.0 270 < th dose independent rect. 18 16
580 269.22 temperature 15.0 10 > th dose independent rect. 20 17
582 269.24 wind 9.0 270 < th dose independent rect. 23 18
588 269.34 precipitation 0.1 270 < th dose independent rect. 17 6
590 269.34 precipitation 0.1 270 < th dose dependent rect. 17 6
602 269.54 wind 9.0 270 < th dose independent rect. 16 21
624 269.77 atmosphere 995.0 270 > th dose independent rect. 17 6
629 269.92 precipitation 0.1 270 < th dose independent rect. 6 5
630 269.92 precipitation 0.1 270 < th dose dependent rect. 6 5
632 269.94 temperature 30.0 270 < th dose independent rect. 17 6
634 269.95 temperature 15.0 270 > th dose independent rect. 19 2
636 269.96 radiation 40.0 270 < th dose dependent rect. 16 9
642 270.01 temperature 10.0 270 > th dose dependent rect. 8 2
645 270.07 wind 9.0 270 < th dose independent rect. 13 3
649 270.11 atmosphere 995.0 270 > th dose independent rect. 13 3
667 270.16 wind 7.0 270 < th dose independent rect. 6 5
681 270.36 humidity 90.0 270 < th dose independent rect. 12 5
684 270.39 temperature 10.0 270 > th dose independent rect. 13 3
686 270.39 atmosphere 1010.0 270 < th dose independent rect. 13 3
689 270.40 precipitation 0.1 270 < th dose independent rect. 5 7
690 270.40 precipitation 0.1 270 < th dose dependent rect. 5 7
695 270.43 atmosphere 995.0 270 > th dose independent rect. 6 5
696 270.43 atmosphere 1015.0 270 < th dose independent rect. 6 5
697 270.43 temperature 10.0 270 > th dose independent rect. 11 19
700 270.49 wind 9.0 270 < th dose independent rect. 11 19
717 270.69 radiation 30.0 90 < th dose dependent rect. 1 16
729 270.78 wind 9.0 270 < th dose independent rect. 5 7
746 271.02 wind 9.0 270 < th dose independent rect. 12 17
750 271.06 humidity 80.0 10 > th dose independent rect. 24 17
765 271.14 radiation 20.0 10 < th dose dependent rect. 23 21
767 271.16 atmosphere 995.0 270 > th dose independent rect. 5 7
768 271.16 atmosphere 1015.0 270 < th dose independent rect. 5 7
769 271.16 temperature 10.0 270 > th dose independent rect. 12 17
801 271.47 atmosphere 1015.0 270 < th dose independent rect. 17 18
802 271.50 precipitation 0.1 270 < th dose independent rect. 13 3
803 271.50 precipitation 0.1 270 < th dose dependent rect. 13 3
814 271.62 atmosphere 1010.0 90 < th dose independent rect. 19 18
827 271.75 wind 1.0 270 > th dose independent rect. 17 6
835 271.80 humidity 50.0 270 > th dose independent rect. 6 5
837 271.81 atmosphere 1010.0 270 < th dose independent rect. 18 4
845 271.87 temperature 10.0 270 > th dose independent rect. 1 15
846 271.87 atmosphere 1015.0 270 < th dose independent rect. 1 15
876 272.03 atmosphere 1015.0 270 < th dose independent rect. 22 9
892 272.21 precipitation 0.1 1440 < th dose independent rect. 10 3
893 272.21 precipitation 0.1 1440 < th dose dependent rect. 10 3
906 272.29 humidity 50.0 270 > th dose independent rect. 11 6
908 272.33 atmosphere 995.0 270 > th dose independent rect. 1 15
910 272.36 precipitation 0.1 270 < th dose independent rect. 23 18
911 272.36 precipitation 0.1 270 < th dose dependent rect. 23 18
916 272.40 wind 1.0 270 > th dose dependent rect. 11 6
920 272.44 wind 9.0 270 < th dose independent rect. 16 9
921 272.45 wind 1.0 90 > th dose dependent rect. 13 6
944 272.59 temperature 15.0 1440 > th dose independent rect. 9 5