Os12g0254400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0254400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.12 | 0.373 | 10.7 | -2.44 | 0.4 | -0.86 | 0.225 | -0.476 | -0.635 | 5.68 | 24.4 | 783 | -- | -- |
| 63.43 | 0.371 | 10.7 | -2.51 | 0.396 | -0.802 | 0.187 | -- | -0.649 | 5.6 | 24.42 | 787 | -- | -- |
| 63.24 | 0.37 | 10.7 | -2.44 | 0.4 | -0.862 | -- | -0.452 | -0.637 | 5.72 | 24.36 | 790 | -- | -- |
| 63.52 | 0.371 | 10.7 | -2.51 | 0.4 | -0.808 | -- | -- | -0.651 | 5.67 | 24.43 | 786 | -- | -- |
| 69.65 | 0.389 | 10.7 | -2.45 | -- | -0.895 | -- | -0.4 | -0.658 | -- | 26.18 | 1205 | -- | -- |
| 72.87 | 0.4 | 10.7 | -2.28 | 0.384 | -- | 0.227 | -- | -0.49 | 4.62 | -- | -- | -- | -- |
| 73 | 0.4 | 10.7 | -2.29 | 0.386 | -- | -- | -- | -0.491 | 4.67 | -- | -- | -- | -- |
| 69.84 | 0.389 | 10.7 | -2.53 | -- | -0.867 | -- | -- | -0.677 | -- | 26.42 | 1206 | -- | -- |
| 209.38 | 0.674 | 10.6 | -- | 0.271 | 0.321 | -- | -- | -0.196 | 5.57 | 33.99 | 87 | -- | -- |
| 80.91 | 0.42 | 10.7 | -2.27 | -- | -- | -- | -- | -0.481 | -- | -- | -- | -- | -- |
| 210.68 | 0.679 | 10.6 | -- | 0.344 | -- | -- | -- | -0.236 | 4.85 | -- | -- | -- | -- |
| 211.15 | 0.677 | 10.6 | -- | -- | 0.603 | -- | -- | -0.162 | -- | 45.72 | 239 | -- | -- |
| 216.94 | 0.687 | 10.6 | -- | -- | -- | -- | -- | -0.229 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.68 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 7 | 61.73 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 22 | 62.38 | wind | 9 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 26 | 62.50 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 28 | 62.50 | wind | 9 | 14400 | > th | dose dependent | sin | 5 | NA |
| 29 | 62.51 | wind | 9 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 30 | 62.53 | temperature | 15 | 10 | > th | dose dependent | sin | 6 | NA |
| 32 | 62.59 | wind | 9 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 33 | 62.60 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 40 | 62.66 | wind | 9 | 14400 | > th | dose independent | sin | 5 | NA |
| 56 | 62.79 | temperature | 30 | 10 | < th | dose dependent | sin | 6 | NA |
| 71 | 62.88 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 72 | 62.89 | wind | 9 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 79 | 62.92 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 87 | 62.98 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 14 |
| 92 | 62.99 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 93 | 62.99 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 97 | 62.99 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 20 |
| 105 | 63.01 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 121 | 63.02 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 20 |
| 127 | 63.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 17 |
| 130 | 63.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 133 | 63.06 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 144 | 63.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 162 | 63.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 163 | 63.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 175 | 63.21 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 214 | 63.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 22 |
| 216 | 63.24 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 11 | 23 |
| 240 | 63.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 248 | 63.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 21 |
| 268 | 63.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 291 | 63.34 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 293 | 63.34 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 307 | 63.34 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 310 | 63.35 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 321 | 63.37 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 337 | 63.39 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 362 | 63.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 366 | 63.44 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 373 | 63.45 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 9 |
| 374 | 63.45 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 21 |
| 381 | 63.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 382 | 63.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 388 | 63.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 18 |
| 402 | 63.49 | wind | 9 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 403 | 63.49 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 421 | 63.51 | wind | 9 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 431 | 63.52 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 455 | 63.53 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 458 | 63.53 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 478 | 63.55 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 497 | 63.57 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 509 | 63.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 523 | 63.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 534 | 63.60 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 5 |
| 536 | 63.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 9 |
| 577 | 63.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 578 | 63.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 619 | 63.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 620 | 63.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 622 | 63.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 7 |
| 699 | 63.67 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 19 |
| 719 | 63.68 | wind | 9 | 14400 | < th | dose independent | sin | 5 | NA |
| 723 | 63.68 | temperature | 30 | 4320 | < th | dose independent | rect. | 22 | 14 |
| 728 | 63.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 748 | 63.69 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 16 |
| 752 | 63.69 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 782 | 63.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 818 | 63.72 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 916 | 63.76 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 948 | 63.76 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 970 | 63.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |