Os12g0250700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0250700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.33 | 0.316 | 3.09 | -0.00339 | 0.121 | 2.14 | -0.0532 | 4.35 | -0.0203 | 22.9 | 17.12 | 593 | -- | -- |
| 49.04 | 0.329 | 3.06 | -0.0234 | 0.0708 | 0.115 | -0.328 | -- | -0.0276 | 0.781 | 17.12 | 593 | -- | -- |
| 45.33 | 0.314 | 3.09 | 0.000452 | 0.123 | 2.22 | -- | 4.5 | -0.0204 | 22.7 | 17 | 585 | -- | -- |
| 48.85 | 0.326 | 3.06 | 0.0329 | 0.106 | 0.287 | -- | -- | -0.00718 | 22.3 | 19.41 | 649 | -- | -- |
| 46.18 | 0.316 | 3.09 | 0.00581 | -- | 2.45 | -- | 5.05 | -0.0184 | -- | 16.66 | 562 | -- | -- |
| 49.08 | 0.328 | 3.06 | -0.0323 | 0.0712 | -- | -0.329 | -- | -0.0299 | 0.772 | -- | -- | -- | -- |
| 49.38 | 0.329 | 3.06 | -0.0187 | 0.0898 | -- | -- | -- | -0.0271 | 22.2 | -- | -- | -- | -- |
| 49.5 | 0.328 | 3.06 | 0.024 | -- | 0.247 | -- | -- | -0.0121 | -- | 18.98 | 602 | -- | -- |
| 48.88 | 0.326 | 3.06 | -- | 0.105 | 0.266 | -- | -- | -0.0121 | 22.3 | 19.34 | 649 | -- | -- |
| 49.86 | 0.33 | 3.06 | -0.0174 | -- | -- | -- | -- | -0.0269 | -- | -- | -- | -- | -- |
| 49.39 | 0.329 | 3.06 | -- | 0.0897 | -- | -- | -- | -0.025 | 22.2 | -- | -- | -- | -- |
| 49.51 | 0.328 | 3.06 | -- | -- | 0.234 | -- | -- | -0.0156 | -- | 18.9 | 601 | -- | -- |
| 49.87 | 0.33 | 3.06 | -- | -- | -- | -- | -- | -0.025 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.12 | wind | 9.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 33 | 45.12 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 65 | 45.19 | temperature | 20.0 | 720 | < th | dose independent | rect. | 7 | 2 |
| 67 | 45.29 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 68 | 45.30 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 69 | 45.31 | wind | 9.0 | 4320 | < th | dose independent | rect. | 23 | 10 |
| 75 | 45.41 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 85 | 45.48 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 87 | 45.49 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 6 |
| 90 | 45.50 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 91 | 45.50 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 94 | 45.50 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 6 |
| 102 | 45.52 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 8 | 10 |
| 113 | 45.56 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 126 | 45.59 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 23 | 7 |
| 137 | 45.61 | wind | 9.0 | 4320 | > th | dose independent | rect. | 23 | 8 |
| 142 | 45.62 | wind | 9.0 | 4320 | > th | dose independent | rect. | 23 | 6 |
| 154 | 45.68 | wind | 9.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 162 | 45.71 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 6 |
| 198 | 45.76 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 199 | 45.76 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 201 | 45.76 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 202 | 45.77 | wind | 7.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 203 | 45.77 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 204 | 45.77 | wind | 7.0 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 243 | 45.80 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 251 | 45.80 | wind | 9.0 | 4320 | > th | dose independent | rect. | 1 | 9 |
| 255 | 45.80 | wind | 1.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 256 | 45.80 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 257 | 45.80 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 391 | 45.84 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 451 | 45.88 | temperature | 25.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 463 | 45.88 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 498 | 45.91 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 510 | 45.91 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 7 | 7 |
| 512 | 45.92 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 519 | 45.92 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 526 | 45.92 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 7 | 10 |
| 529 | 45.93 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 534 | 45.93 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 541 | 45.94 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 543 | 45.94 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 566 | 45.96 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 579 | 45.97 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 583 | 45.97 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 589 | 45.97 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 623 | 46.00 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 631 | 46.00 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 633 | 46.00 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 637 | 46.01 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 4 |
| 642 | 46.01 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 649 | 46.02 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 652 | 46.02 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 4 |
| 660 | 46.02 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 689 | 46.05 | wind | 1.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 808 | 46.13 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 819 | 46.14 | wind | 1.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 836 | 46.14 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 14 | 6 |
| 846 | 46.15 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 847 | 46.15 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 945 | 46.18 | atmosphere | 1005.0 | 43200 | < th | dose dependent | sin | 0 | NA |
| 964 | 46.19 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 975 | 46.19 | atmosphere | 1005.0 | 43200 | < th | dose dependent | sin | 22 | NA |