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Os12g0248600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.07 (0.0482) R2 : 0.602
β1 : 0.502 (0.177) R2dD : 0.00739 R2D : -0.00762
β2 : 5.12 (0.261) R2dC : 1.47 R2C : 0.216
β3 : 2.34 (0.247) R2dE : 0.34 R2E : -0.901
β4 : 6.12 (1.15) R2dD*C : 0.1 R2D*C : -0.0899
β5 : 5.98 (1.05) R2dD*E : 0.115 R2D*E : -0.0923
γ1 : -0.183 (0.103) R2dN8 : 0.00374 R2N8 : 0.000893
σ : 0.905
deviance : 371.4
__
_____
C
peak time of C : 17.3
E
wheather : radiation
threshold : 0.04825
memory length : 347
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 2.72
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
371.4 0.905 7.07 0.502 5.12 2.34 6.12 5.98 -0.183 17.3 0.04825 347 2.72 --
395.87 0.927 7.12 0.223 5.74 2.93 0.619 -- -0.224 17.3 0.01299 400 3.21 --
409.91 0.943 7.07 0.0381 4.17 2.13 -- 4.64 -0.272 17.5 0.12 1729 3.14 --
394.06 0.925 7.08 0.426 5.68 2.84 -- -- -0.159 17.2 0.009896 400 3.54 --
911.97 1.41 6.99 0.215 -- -0.176 -- 1.68 -0.272 -- 0.07625 7208 2.94 --
425.45 0.967 7.05 0.347 3.08 -- 1.62 -- -0.19 18.5 -- -- -- --
431.46 0.973 7.04 0.327 3.09 -- -- -- -0.184 18.4 -- -- -- --
483.27 1.02 7.14 0.657 -- -3.54 -- -- -0.00813 -- 101.7 9504 6.99 --
397.72 0.929 7.06 -- 5.85 3.07 -- -- -0.173 17.1 0.1096 406 4.12 --
926.28 1.42 6.98 0.247 -- -- -- -- -0.249 -- -- -- -- --
434.29 0.975 7.05 -- 3.08 -- -- -- -0.22 18.4 -- -- -- --
428.96 0.965 6.98 -- -- -3.29 -- -- -0.25 -- 121.2 2179 5.76 --
927.88 1.42 6.99 -- -- -- -- -- -0.277 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 363.67 radiation 40.0 270 < th dose independent rect. 18 16
6 365.56 precipitation 0.1 270 < th dose independent rect. 3 9
7 365.56 precipitation 0.1 270 < th dose dependent rect. 3 9
8 365.68 temperature 10.0 270 > th dose dependent rect. 3 8
9 365.74 temperature 15.0 270 > th dose independent rect. 12 15
10 366.00 humidity 50.0 270 > th dose independent rect. 3 9
11 366.42 temperature 10.0 270 > th dose independent rect. 3 9
12 366.42 atmosphere 995.0 270 > th dose independent rect. 3 9
13 366.42 atmosphere 1015.0 270 < th dose independent rect. 3 9
16 366.82 humidity 60.0 90 > th dose independent rect. 18 18
17 366.90 radiation 40.0 270 < th dose dependent rect. 18 15
18 366.93 wind 9.0 270 < th dose independent rect. 3 9
20 367.18 wind 1.0 270 > th dose independent rect. 12 15
23 367.78 wind 9.0 270 < th dose independent rect. 12 15
26 368.42 radiation 10.0 270 < th dose independent rect. 22 9
27 368.49 radiation 20.0 270 < th dose dependent rect. 22 9
33 369.02 wind 7.0 270 < th dose independent rect. 18 15
40 369.30 precipitation 0.1 270 < th dose independent rect. 6 16
41 369.30 precipitation 0.1 270 < th dose dependent rect. 6 16
47 369.55 temperature 15.0 270 > th dose independent rect. 7 15
48 369.60 temperature 10.0 270 > th dose independent rect. 9 9
49 369.60 atmosphere 1015.0 270 < th dose independent rect. 9 9
50 369.60 temperature 10.0 270 > th dose independent rect. 18 15
51 369.60 humidity 50.0 270 > th dose independent rect. 18 15
53 369.82 wind 1.0 270 > th dose independent rect. 11 18
61 370.15 precipitation 0.1 270 < th dose independent rect. 18 15
62 370.15 precipitation 0.1 270 < th dose dependent rect. 18 15
63 370.15 radiation 1.0 270 < th dose dependent rect. 22 20
73 370.37 wind 1.0 270 > th dose independent rect. 22 8
77 370.47 humidity 70.0 270 > th dose independent rect. 22 9
80 370.50 wind 9.0 270 < th dose independent rect. 7 15
84 370.60 temperature 10.0 270 > th dose independent rect. 22 9
85 370.60 temperature 30.0 270 < th dose independent rect. 22 9
86 370.60 humidity 50.0 270 > th dose independent rect. 22 9
88 370.60 atmosphere 995.0 270 > th dose independent rect. 22 9
91 370.61 wind 9.0 270 < th dose independent rect. 22 9
105 370.91 wind 9.0 270 < th dose independent rect. 9 9
124 371.20 precipitation 0.1 270 < th dose independent rect. 12 15
125 371.20 precipitation 0.1 270 < th dose dependent rect. 12 15
137 371.66 humidity 60.0 30 > th dose independent rect. 18 8
138 371.75 atmosphere 995.0 270 > th dose independent rect. 18 15
140 371.83 wind 1.0 10 > th dose independent sin 16 NA
148 372.14 radiation 1.0 30 < th dose dependent rect. 18 8
155 372.24 precipitation 0.1 270 < th dose independent rect. 22 9
159 372.24 precipitation 0.1 270 < th dose dependent rect. 22 9
167 372.41 precipitation 0.1 270 < th dose independent rect. 9 9
168 372.41 precipitation 0.1 270 < th dose dependent rect. 9 9
169 372.47 temperature 30.0 10 < th dose independent rect. 18 8
173 372.56 radiation 1.0 1440 < th dose dependent rect. 19 8
182 372.74 radiation 1.0 270 < th dose independent rect. 22 20
190 372.96 radiation 30.0 43200 < th dose dependent rect. 19 8
193 373.02 wind 1.0 270 > th dose independent rect. 9 9
201 373.22 radiation 1.0 30 < th dose independent rect. 18 8
218 373.72 atmosphere 1015.0 270 < th dose independent rect. 6 16
219 373.76 wind 7.0 90 < th dose independent rect. 18 7
226 373.88 humidity 60.0 30 > th dose independent rect. 18 6
233 374.02 atmosphere 995.0 270 > th dose independent rect. 12 15
241 374.07 radiation 1.0 1440 < th dose dependent rect. 19 6
253 374.24 temperature 10.0 1440 > th dose independent rect. 19 8
256 374.24 temperature 30.0 1440 < th dose independent rect. 19 8
260 374.24 humidity 50.0 1440 > th dose independent rect. 19 8
262 374.24 atmosphere 995.0 1440 > th dose independent rect. 19 8
263 374.24 radiation 1.0 1440 < th dose independent rect. 19 8
283 374.24 temperature 10.0 1440 > th dose independent rect. 3 16
291 374.32 radiation 1.0 30 < th dose dependent rect. 18 6
308 374.52 radiation 40.0 90 < th dose independent rect. 12 19
340 374.86 wind 1.0 10 > th dose independent rect. 18 10
346 374.89 radiation 40.0 270 < th dose independent rect. 12 15
349 374.94 radiation 30.0 43200 < th dose dependent rect. 19 6
352 374.98 wind 7.0 270 < th dose independent rect. 16 7
356 375.04 temperature 30.0 270 < th dose independent rect. 18 15
380 375.21 radiation 1.0 270 < th dose independent rect. 22 17
383 375.25 wind 1.0 270 > th dose independent rect. 5 6
396 375.36 temperature 30.0 10 < th dose independent rect. 18 6
398 375.38 radiation 1.0 30 < th dose independent rect. 18 6
408 375.55 temperature 10.0 1440 > th dose independent rect. 19 6
411 375.55 temperature 30.0 1440 < th dose independent rect. 19 6
415 375.55 humidity 50.0 1440 > th dose independent rect. 19 6
417 375.55 atmosphere 995.0 1440 > th dose independent rect. 19 6
418 375.55 radiation 1.0 1440 < th dose independent rect. 19 6
438 375.55 temperature 10.0 1440 > th dose independent rect. 1 18
443 375.63 temperature 10.0 90 > th dose independent rect. 18 7
448 375.63 temperature 10.0 90 > th dose independent rect. 1 17
449 375.63 atmosphere 1015.0 90 < th dose independent rect. 1 17
450 375.67 radiation 40.0 90 < th dose dependent rect. 18 7
455 375.71 wind 1.0 270 > th dose independent rect. 7 15
456 375.72 precipitation 0.1 90 < th dose independent rect. 18 7
457 375.72 precipitation 0.1 90 < th dose dependent rect. 18 7
460 375.74 atmosphere 995.0 90 > th dose independent rect. 18 7
462 375.75 radiation 1.0 270 > th dose independent rect. 18 17
476 376.02 radiation 1.0 270 > th dose independent rect. 4 7
492 376.09 radiation 30.0 10 < th dose independent rect. 12 20
506 376.17 atmosphere 1015.0 270 < th dose independent rect. 22 8
512 376.27 wind 1.0 270 > th dose independent rect. 7 3
535 376.52 wind 9.0 90 < th dose independent rect. 1 17
583 376.87 radiation 1.0 270 > th dose independent rect. 17 19
605 377.10 temperature 20.0 720 < th dose independent rect. 4 2
611 377.20 atmosphere 995.0 270 > th dose independent rect. 9 9
621 377.25 radiation 40.0 14400 < th dose independent rect. 16 15
624 377.30 radiation 10.0 10 > th dose independent rect. 8 7
625 377.30 precipitation 0.1 270 < th dose independent rect. 16 7
627 377.30 precipitation 0.1 270 < th dose dependent rect. 16 7
628 377.31 atmosphere 995.0 270 > th dose independent rect. 6 16
638 377.41 temperature 10.0 270 > th dose dependent rect. 22 8
718 377.71 wind 1.0 270 > th dose independent rect. 3 9
728 377.75 radiation 40.0 270 < th dose independent rect. 3 9
742 377.84 atmosphere 1015.0 270 < th dose independent rect. 12 15
744 377.86 wind 1.0 10 > th dose independent rect. 18 17
745 377.88 humidity 60.0 270 > th dose independent rect. 7 3
749 377.93 humidity 90.0 10 < th dose independent rect. 8 7
765 378.11 temperature 10.0 270 > th dose independent rect. 16 7
766 378.11 radiation 40.0 270 < th dose independent rect. 16 7
794 378.31 wind 9.0 270 < th dose independent rect. 23 17
801 378.39 temperature 10.0 10 > th dose dependent rect. 8 16
828 378.56 precipitation 0.1 90 < th dose independent rect. 1 17
829 378.56 precipitation 0.1 90 < th dose dependent rect. 1 17
840 378.64 atmosphere 1015.0 90 < th dose dependent rect. 18 7
850 378.68 precipitation 0.1 270 < th dose independent rect. 7 3
856 378.68 precipitation 0.1 270 < th dose dependent rect. 7 3
859 378.71 temperature 15.0 270 > th dose independent rect. 7 3
861 378.72 radiation 1.0 270 > th dose independent sin 8 NA
864 378.76 atmosphere 995.0 270 > th dose independent rect. 7 3
865 378.76 atmosphere 1015.0 270 < th dose independent rect. 7 3
866 378.76 temperature 10.0 270 > th dose independent rect. 10 21
867 378.77 wind 9.0 270 < th dose independent rect. 7 3
883 378.88 temperature 30.0 270 < th dose independent rect. 4 7
895 378.95 wind 9.0 270 < th dose independent rect. 10 21
900 378.98 precipitation 0.1 270 < th dose independent rect. 23 17
902 378.98 precipitation 0.1 270 < th dose dependent rect. 23 17
907 379.02 atmosphere 1015.0 90 < th dose independent rect. 18 7
921 379.05 radiation 40.0 10 < th dose dependent rect. 13 18
922 379.07 radiation 1.0 270 < th dose dependent sin 8 NA
944 379.16 wind 1.0 10 > th dose independent rect. 18 8
970 379.31 temperature 25.0 720 < th dose independent rect. 7 4
974 379.36 wind 1.0 10 > th dose independent sin 8 NA
980 379.39 wind 1.0 10 > th dose independent rect. 18 15
981 379.40 temperature 30.0 270 < th dose independent rect. 7 2