Os12g0244200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0244200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.26 | 0.326 | 10.4 | -0.392 | 0.768 | -0.501 | 0.249 | 0.622 | -0.239 | 18.3 | 19.9 | 2747 | -- | -- |
| 49.01 | 0.326 | 10.4 | -0.275 | 0.745 | -0.586 | 0.168 | -- | -0.217 | 18.3 | 19.9 | 2760 | -- | -- |
| 48.41 | 0.324 | 10.4 | -0.393 | 0.769 | -0.5 | -- | 0.624 | -0.238 | 18.3 | 19.88 | 2747 | -- | -- |
| 49.08 | 0.326 | 10.4 | -0.299 | 0.765 | -0.6 | -- | -- | -0.22 | 18.3 | 19.8 | 2760 | -- | -- |
| 78.1 | 0.412 | 10.4 | -0.41 | -- | -0.473 | -- | 0.67 | -0.256 | -- | 20.5 | 2134 | -- | -- |
| 56.01 | 0.351 | 10.4 | 0.0333 | 0.75 | -- | 0.374 | -- | -0.0687 | 18.4 | -- | -- | -- | -- |
| 56.36 | 0.352 | 10.4 | 0.0287 | 0.751 | -- | -- | -- | -0.0675 | 18.4 | -- | -- | -- | -- |
| 77.82 | 0.411 | 10.4 | -0.153 | -- | -0.402 | -- | -- | -0.236 | -- | 22.3 | 721 | -- | -- |
| 50.19 | 0.33 | 10.4 | -- | 0.765 | -0.372 | -- | -- | -0.191 | 18.3 | 22.65 | 1453 | -- | -- |
| 85.68 | 0.433 | 10.4 | 0.00904 | -- | -- | -- | -- | -0.0835 | -- | -- | -- | -- | -- |
| 56.38 | 0.351 | 10.4 | -- | 0.751 | -- | -- | -- | -0.0706 | 18.4 | -- | -- | -- | -- |
| 59.5 | 0.359 | 10.4 | -- | -- | -0.569 | -- | -- | -0.174 | -- | 26.3 | 357 | -- | -- |
| 85.68 | 0.432 | 10.4 | -- | -- | -- | -- | -- | -0.0845 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.30 | temperature | 10 | 270 | > th | dose dependent | rect. | 8 | 17 |
| 3 | 46.59 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 4 | 46.62 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 9 | 46.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 13 | 46.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 19 | 47.08 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 34 | 47.26 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 37 | 47.29 | humidity | 90 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 62 | 47.53 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 79 | 47.72 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 84 | 47.75 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 86 | 47.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 19 |
| 88 | 47.77 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 97 | 47.82 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 99 | 47.84 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 104 | 47.84 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 115 | 47.86 | humidity | 90 | 4320 | < th | dose independent | rect. | 16 | 6 |
| 117 | 47.86 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 122 | 47.88 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 123 | 47.88 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 125 | 47.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 127 | 47.89 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 145 | 47.93 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 156 | 47.98 | temperature | 20 | 4320 | > th | dose independent | rect. | 15 | 9 |
| 159 | 47.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 170 | 47.99 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 172 | 48.00 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 224 | 48.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 253 | 48.11 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 281 | 48.14 | humidity | 90 | 4320 | > th | dose independent | rect. | 16 | 6 |
| 287 | 48.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 288 | 48.15 | radiation | 1 | 14400 | > th | dose independent | sin | 15 | NA |
| 292 | 48.15 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 300 | 48.16 | radiation | 1 | 14400 | < th | dose independent | sin | 15 | NA |
| 306 | 48.16 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 315 | 48.17 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 318 | 48.17 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 345 | 48.19 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 399 | 48.22 | humidity | 90 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 493 | 48.28 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 494 | 48.29 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 537 | 48.31 | radiation | 1 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 555 | 48.33 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 581 | 48.34 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 625 | 48.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 634 | 48.38 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 639 | 48.39 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 641 | 48.39 | humidity | 90 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 662 | 48.41 | temperature | 15 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 670 | 48.43 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 677 | 48.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 718 | 48.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 21 |
| 721 | 48.47 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 722 | 48.47 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 765 | 48.50 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 774 | 48.50 | temperature | 30 | 90 | < th | dose dependent | rect. | 14 | 21 |
| 783 | 48.51 | humidity | 80 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 828 | 48.53 | radiation | 1 | 14400 | < th | dose dependent | rect. | 15 | 14 |
| 916 | 48.58 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 933 | 48.59 | atmosphere | 995 | 43200 | < th | dose independent | sin | 22 | NA |
| 934 | 48.59 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 941 | 48.59 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 971 | 48.60 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 993 | 48.62 | atmosphere | 995 | 43200 | > th | dose independent | sin | 22 | NA |