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Os12g0244100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Heat shock 70 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.8 (0.0188) R2 : 0.416
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.703 (0.0491) R2dC : 0.264 R2C : 0.232
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.417 (0.0396) R2dN8 : 0.184 R2N8 : 0.152
σ : 0.355
deviance : 57.46
__
_____
C
peak time of C : 17.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
43.42 0.31 13.8 0.388 0.774 -0.508 -0.14 0.818 -0.267 17 20.31 256 -- --
46.07 0.316 13.8 0.338 0.763 -0.543 -0.0501 -- -0.275 16.9 20.4 254 -- --
43.38 0.307 13.8 0.374 0.776 -0.509 -- 0.735 -0.264 17 20.5 239 -- --
45.59 0.314 13.8 0.257 0.796 -0.579 -- -- -0.281 17 20.6 238 -- --
69.48 0.388 13.8 0.448 -- -0.668 -- 0.704 -0.257 -- 20.4 1500 -- --
57.3 0.355 13.8 0.0711 0.704 -- 0.102 -- -0.409 17.2 -- -- -- --
57.32 0.355 13.8 0.071 0.705 -- -- -- -0.409 17.2 -- -- -- --
66.72 0.38 13.8 0.571 -- -1.09 -- -- -0.248 -- 18.4 2865 -- --
47.1 0.32 13.8 -- 0.781 -0.514 -- -- -0.307 16.9 20.5 234 -- --
83.28 0.426 13.8 0.0463 -- -- -- -- -0.426 -- -- -- -- --
57.46 0.355 13.8 -- 0.703 -- -- -- -0.417 17.2 -- -- -- --
72.72 0.397 13.8 -- -- -0.715 -- -- -0.334 -- 19.6 1467 -- --
83.33 0.426 13.8 -- -- -- -- -- -0.432 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 40.37 temperature 20 270 > th dose independent rect. 10 21
4 40.91 temperature 20 14400 < th dose independent rect. 20 1
7 41.35 temperature 20 14400 > th dose independent rect. 20 1
14 41.60 temperature 20 90 > th dose independent rect. 13 18
19 41.83 temperature 20 90 > th dose independent rect. 17 14
23 41.96 temperature 20 270 > th dose independent rect. 15 15
44 42.45 temperature 20 90 < th dose independent sin 11 NA
45 42.45 wind 1 14400 > th dose independent rect. 24 2
46 42.45 wind 9 43200 < th dose independent rect. 9 5
48 42.45 temperature 20 270 < th dose independent rect. 16 18
55 42.51 wind 9 43200 > th dose independent rect. 9 5
58 42.53 humidity 80 14400 > th dose dependent rect. 5 1
71 42.69 wind 3 43200 < th dose dependent rect. 5 1
74 42.71 temperature 20 270 > th dose independent rect. 23 22
89 42.81 wind 3 14400 < th dose dependent rect. 22 4
90 42.82 temperature 20 1440 < th dose independent rect. 5 2
112 42.92 wind 9 43200 < th dose dependent rect. 5 1
120 42.95 humidity 80 43200 > th dose independent rect. 6 1
122 42.95 wind 9 43200 > th dose independent rect. 8 8
124 42.96 wind 5 43200 < th dose dependent rect. 1 1
130 43.00 temperature 20 1440 > th dose independent rect. 6 1
135 43.02 humidity 80 43200 < th dose independent rect. 6 1
136 43.02 wind 9 43200 < th dose independent rect. 7 9
137 43.02 wind 9 43200 > th dose independent rect. 4 12
141 43.03 wind 1 43200 > th dose dependent rect. 5 1
142 43.03 humidity 80 14400 > th dose dependent rect. 12 2
143 43.03 wind 9 43200 > th dose dependent rect. 10 6
164 43.09 wind 1 43200 < th dose dependent rect. 12 1
181 43.16 wind 3 43200 < th dose independent rect. 6 1
199 43.23 humidity 80 14400 > th dose dependent rect. 10 1
221 43.28 humidity 80 14400 > th dose dependent rect. 10 5
226 43.29 temperature 20 90 < th dose independent rect. 17 22
238 43.32 wind 3 43200 > th dose independent rect. 6 1
245 43.33 temperature 20 90 < th dose independent rect. 17 12
251 43.34 humidity 80 14400 > th dose independent rect. 13 1
270 43.37 temperature 25 270 < th dose dependent rect. 15 19
280 43.40 temperature 20 90 < th dose independent rect. 19 10
292 43.42 temperature 20 90 < th dose independent rect. 11 18
297 43.43 wind 9 43200 > th dose independent sin 1 NA
316 43.46 humidity 90 14400 > th dose independent rect. 21 1
329 43.47 temperature 20 270 > th dose independent rect. 22 9
341 43.49 wind 9 43200 < th dose independent sin 1 NA
360 43.51 temperature 20 90 < th dose independent rect. 5 23
367 43.52 wind 3 43200 < th dose dependent rect. 21 10
380 43.53 temperature 25 720 < th dose dependent rect. 17 9
401 43.56 temperature 20 270 > th dose independent sin 9 NA
402 43.56 temperature 20 90 > th dose independent sin 11 NA
437 43.60 wind 1 14400 < th dose independent rect. 24 2
438 43.60 temperature 20 720 < th dose independent rect. 17 9
498 43.68 wind 1 43200 > th dose dependent rect. 1 1
523 43.72 temperature 20 720 < th dose independent rect. 19 6
530 43.72 wind 3 43200 < th dose dependent rect. 5 8
533 43.73 wind 9 43200 > th dose independent rect. 10 3
540 43.73 temperature 20 90 < th dose independent rect. 21 23
552 43.74 temperature 25 10 < th dose dependent sin 12 NA
562 43.75 wind 9 14400 < th dose dependent rect. 22 4
564 43.76 temperature 20 270 > th dose independent no NA NA
565 43.76 wind 3 43200 < th dose independent rect. 5 8
589 43.78 temperature 20 90 < th dose independent no NA NA
618 43.80 temperature 25 720 < th dose dependent rect. 19 6
619 43.81 humidity 90 14400 > th dose independent rect. 9 1
679 43.87 temperature 20 1440 < th dose independent rect. 22 17
693 43.89 temperature 20 30 > th dose independent sin 8 NA
697 43.89 wind 3 43200 > th dose independent rect. 5 8
710 43.90 temperature 20 90 < th dose independent rect. 21 8
724 43.91 wind 9 43200 < th dose independent rect. 10 3
747 43.92 wind 3 43200 < th dose dependent rect. 21 16
748 43.93 wind 1 43200 > th dose independent rect. 12 1
754 43.93 temperature 20 1440 < th dose dependent rect. 2 3
759 43.94 temperature 20 1440 < th dose independent sin 5 NA
780 43.95 wind 9 14400 < th dose dependent rect. 20 12
787 43.96 temperature 20 1440 < th dose independent rect. 2 12
797 43.96 temperature 20 30 > th dose independent rect. 1 23
800 43.96 wind 7 43200 > th dose dependent rect. 7 9
809 43.97 humidity 60 43200 < th dose dependent rect. 7 2
832 43.98 wind 9 43200 > th dose dependent rect. 10 20
852 43.99 humidity 60 43200 < th dose dependent rect. 21 12
857 44.00 temperature 20 1440 < th dose independent rect. 3 8
862 44.00 temperature 20 1440 > th dose independent rect. 22 17
876 44.00 humidity 60 43200 < th dose dependent rect. 5 4
883 44.01 temperature 20 1440 > th dose independent sin 5 NA
923 44.03 wind 9 43200 > th dose independent no NA NA
928 44.03 temperature 20 1440 > th dose independent rect. 2 12