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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0243100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.83 (0.0276) R2 : 0.0262
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.204 (0.0582) R2dN8 : 0.0338 R2N8 : 0.0262
σ : 0.521
deviance : 124.43
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
120.04 0.515 2.82 -0.00334 0.118 0.64 -0.354 -0.858 0.217 6.1 10.83 748 -- --
120.04 0.51 2.82 0.00899 0.118 0.827 -0.352 -- 0.217 6.08 10.82 755 -- --
120.33 0.511 2.82 -0.00955 0.115 0.613 -- -0.868 0.217 6.46 10.84 794 -- --
120.33 0.511 2.82 0.00265 0.115 0.801 -- -- 0.217 6.45 10.83 821 -- --
121.01 0.512 2.82 -0.0083 -- 0.613 -- -0.68 0.218 -- 10.85 790 -- --
123.91 0.522 2.83 -0.048 0.0832 -- -0.218 -- 0.196 5.58 -- -- -- --
124.02 0.522 2.83 -0.0486 0.083 -- -- -- 0.197 6.12 -- -- -- --
121.01 0.512 2.82 0.00124 -- 0.761 -- -- 0.218 -- 10.85 788 -- --
120.33 0.511 2.82 -- 0.115 0.8 -- -- 0.217 6.45 10.83 816 -- --
124.37 0.521 2.83 -0.0463 -- -- -- -- 0.199 -- -- -- -- --
124.08 0.521 2.82 -- 0.0823 -- -- -- 0.202 6.15 -- -- -- --
121.01 0.512 2.82 -- -- 0.76 -- -- 0.218 -- 10.85 785 -- --
124.43 0.521 2.83 -- -- -- -- -- 0.204 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 117.48 radiation 10.0 10 > th dose independent rect. 6 1
27 117.48 radiation 10.0 10 > th dose dependent rect. 6 1
53 117.52 wind 5.0 90 > th dose dependent rect. 23 1
54 117.64 wind 9.0 720 > th dose independent rect. 22 1
78 117.64 wind 9.0 720 > th dose dependent rect. 22 1
170 119.01 wind 3.0 30 < th dose dependent rect. 6 1
171 119.06 atmosphere 1005.0 30 > th dose dependent rect. 6 1
175 119.42 wind 9.0 90 > th dose independent rect. 15 1
177 119.42 wind 9.0 90 > th dose dependent rect. 15 1
179 119.43 wind 9.0 10 > th dose independent rect. 15 1
187 119.43 wind 9.0 10 > th dose dependent rect. 15 1
199 119.55 wind 9.0 720 < th dose independent rect. 1 16
233 119.61 humidity 80.0 30 > th dose dependent rect. 6 1
234 119.62 humidity 80.0 90 < th dose independent rect. 22 1
235 119.68 humidity 80.0 90 < th dose dependent rect. 22 1
261 119.78 wind 9.0 720 > th dose dependent rect. 12 4
262 119.81 temperature 30.0 30 < th dose dependent rect. 6 1
298 119.90 wind 9.0 720 > th dose independent rect. 12 4
325 120.00 wind 9.0 720 > th dose dependent rect. 13 1
330 120.06 wind 3.0 30 < th dose independent rect. 6 1
335 120.09 wind 9.0 720 < th dose independent rect. 5 23
384 120.16 wind 9.0 720 > th dose independent rect. 13 1
388 120.22 wind 9.0 720 > th dose dependent rect. 15 1
389 120.23 wind 5.0 270 > th dose dependent rect. 20 4
392 120.25 temperature 25.0 10 > th dose independent rect. 24 7
398 120.32 wind 9.0 1440 < th dose independent rect. 7 1
399 120.32 temperature 25.0 10 > th dose independent rect. 6 1
400 120.32 temperature 10.0 1440 > th dose independent rect. 7 1
404 120.32 temperature 30.0 1440 < th dose independent rect. 7 1
408 120.32 humidity 50.0 1440 > th dose independent rect. 7 1
413 120.32 atmosphere 995.0 1440 > th dose independent rect. 7 1
414 120.32 atmosphere 1015.0 1440 < th dose independent rect. 7 1
416 120.32 temperature 10.0 1440 > th dose independent rect. 8 23
419 120.33 wind 9.0 720 > th dose independent rect. 15 1
425 120.36 humidity 80.0 30 > th dose independent rect. 6 1
428 120.37 humidity 90.0 30 < th dose independent rect. 6 1
429 120.37 atmosphere 1005.0 30 > th dose independent rect. 6 1
435 120.38 temperature 10.0 30 > th dose independent rect. 6 1
437 120.38 temperature 30.0 30 < th dose independent rect. 6 1
438 120.38 humidity 50.0 30 > th dose independent rect. 6 1
441 120.38 atmosphere 995.0 30 > th dose independent rect. 6 1
442 120.38 atmosphere 1015.0 30 < th dose independent rect. 6 1
443 120.38 radiation 20.0 30 < th dose independent rect. 6 1
446 120.38 precipitation 0.1 30 < th dose independent rect. 6 1
447 120.38 temperature 10.0 30 > th dose independent rect. 7 23
448 120.38 precipitation 0.1 30 < th dose dependent rect. 6 1
449 120.39 wind 1.0 30 > th dose independent rect. 6 1
451 120.40 temperature 25.0 10 > th dose independent rect. 22 9
469 120.53 wind 9.0 30 < th dose independent rect. 7 23
484 120.58 temperature 10.0 30 > th dose dependent rect. 6 1
494 120.65 radiation 40.0 30 < th dose dependent rect. 6 1
510 120.75 wind 9.0 720 < th dose independent rect. 11 16
513 120.76 wind 9.0 720 < th dose independent rect. 14 23
555 120.80 wind 9.0 720 < th dose independent rect. 5 8
569 120.84 temperature 25.0 30 > th dose independent rect. 4 1
573 120.86 wind 9.0 720 < th dose independent rect. 5 14
584 120.89 wind 9.0 720 < th dose independent rect. 7 20
595 120.93 wind 9.0 720 < th dose independent rect. 7 10
600 120.96 humidity 90.0 10 < th dose independent rect. 4 1
602 120.96 temperature 25.0 90 > th dose dependent rect. 4 1
609 121.01 temperature 25.0 10 > th dose independent rect. 24 5
616 121.02 wind 9.0 720 > th dose dependent rect. 20 20
619 121.03 wind 9.0 720 < th dose independent rect. 11 8
632 121.06 wind 1.0 30 > th dose dependent rect. 4 1
668 121.11 wind 9.0 720 > th dose independent rect. 21 19
703 121.18 wind 9.0 720 < th dose independent rect. 7 16
712 121.20 temperature 25.0 10 > th dose independent rect. 4 3
738 121.22 wind 9.0 720 > th dose dependent rect. 12 11
788 121.32 wind 9.0 720 > th dose independent rect. 12 11
829 121.36 wind 9.0 720 < th dose independent rect. 15 8
835 121.37 atmosphere 1015.0 30 < th dose dependent rect. 6 1
849 121.39 wind 9.0 720 < th dose independent rect. 7 12
865 121.41 wind 7.0 720 < th dose independent rect. 15 2
910 121.47 humidity 90.0 10 < th dose dependent rect. 6 1
915 121.48 radiation 40.0 720 < th dose dependent rect. 17 8
917 121.49 humidity 90.0 10 < th dose independent rect. 22 9
955 121.54 wind 9.0 720 > th dose independent sin 23 NA
960 121.54 wind 9.0 720 > th dose dependent sin 22 NA
966 121.55 temperature 30.0 10 > th dose independent rect. 11 1
977 121.56 temperature 30.0 90 > th dose independent rect. 11 1
992 121.58 wind 9.0 720 < th dose independent rect. 21 22
998 121.59 wind 9.0 720 < th dose independent rect. 15 12