Os12g0230600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1685 family protein.
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Os12g0230600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1685 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 397.25 | 0.936 | 4.96 | -2.28 | 2.04 | 1.22 | -0.743 | 3.12 | 2.93 | 9.66 | 24.93 | 4267 | 1.9 | 0.961 |
| 399.86 | 0.931 | 4.95 | -2.09 | 2.04 | 1.55 | -0.728 | -- | 2.94 | 9.63 | 24.82 | 4273 | 1.79 | 1.01 |
| 399.34 | 0.931 | 4.96 | -2.28 | 2.04 | 1.24 | -- | 3.16 | 2.93 | 9.67 | 24.92 | 4268 | 1.88 | 0.933 |
| 401.57 | 0.933 | 4.95 | -2.1 | 2.05 | 1.55 | -- | -- | 2.93 | 9.63 | 24.8 | 4273 | 1.8 | 1.05 |
| 504.45 | 1.05 | 4.83 | -2.48 | -- | 2.21 | -- | 2.52 | 2.84 | -- | 26.08 | 3679 | 1.73 | 1.73 |
| 441.73 | 0.985 | 4.9 | -2.33 | 2.11 | -- | -0.569 | -- | 3.03 | 9.68 | -- | -- | -- | -- |
| 442.95 | 0.986 | 4.91 | -2.35 | 2.11 | -- | -- | -- | 3.03 | 9.69 | -- | -- | -- | -- |
| 438.45 | 0.975 | 4.95 | -2.44 | -- | 2.02 | -- | -- | 3.09 | -- | 26.04 | 3607 | 2.72 | 2.18 |
| 515.1 | 1.06 | 4.95 | -- | 2.05 | 1.89 | -- | -- | 3.09 | 9.74 | 24.87 | 4288 | 1.83 | 1.08 |
| 708.19 | 1.24 | 4.96 | -2.37 | -- | -- | -- | -- | 3.03 | -- | -- | -- | -- | -- |
| 588.42 | 1.13 | 4.85 | -- | 2.12 | -- | -- | -- | 3.29 | 9.77 | -- | -- | -- | -- |
| 578.96 | 1.12 | 4.91 | -- | -- | 2.04 | -- | -- | 3.27 | -- | 26.08 | 3605 | 2.72 | 2.57 |
| 856.13 | 1.37 | 4.9 | -- | -- | -- | -- | -- | 3.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 382.78 | temperature | 30 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 4 | 383.09 | temperature | 30 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 6 | 383.11 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 11 | 383.25 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 29 | 384.09 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 117 | 390.02 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 133 | 390.78 | humidity | 80 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 154 | 391.71 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 155 | 391.75 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 170 | 391.79 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 178 | 392.15 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 182 | 392.32 | humidity | 80 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 183 | 392.32 | temperature | 30 | 43200 | > th | dose dependent | sin | 8 | NA |
| 190 | 392.46 | humidity | 80 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 199 | 392.58 | temperature | 30 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 210 | 392.83 | wind | 1 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 219 | 392.89 | humidity | 90 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 221 | 392.96 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 222 | 392.96 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 225 | 393.03 | humidity | 90 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 257 | 393.51 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 261 | 393.58 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 264 | 393.63 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 299 | 393.99 | humidity | 80 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 304 | 394.04 | humidity | 80 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 357 | 394.44 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 358 | 394.44 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 360 | 394.50 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 361 | 394.52 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 392 | 394.71 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 394 | 394.73 | temperature | 30 | 43200 | > th | dose independent | sin | 9 | NA |
| 399 | 394.78 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 437 | 394.86 | temperature | 30 | 43200 | < th | dose independent | sin | 9 | NA |
| 439 | 394.88 | radiation | 40 | 43200 | > th | dose independent | sin | 14 | NA |
| 481 | 395.07 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 507 | 395.46 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 520 | 395.46 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 18 |
| 532 | 395.53 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 595 | 395.98 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 614 | 396.04 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 681 | 396.21 | radiation | 20 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 801 | 396.48 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 908 | 396.70 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 922 | 396.72 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |