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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0224400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Exostosin-like family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.52 (0.0271) R2 : 0.00325
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0696 (0.0571) R2dN8 : 0.00419 R2N8 : 0.00325
σ : 0.511
deviance : 119.81
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
108.61 0.49 2.39 -2.34 0.328 -132 -0.571 -280 -0.0669 6.54 14.97 760 -- --
112.92 0.499 3.51 0.00579 0.328 0.572 -0.577 -- -0.0739 6.8 14.97 760 -- --
109.42 0.487 2.39 -2.34 0.325 -132 -- -280 -0.0654 6.59 14.96 771 -- --
110.89 0.494 3.51 0.0657 0.323 0.959 -- -- -0.0523 6.76 18.12 114 -- --
114.93 0.499 2.39 -2.34 -- -132 -- -280 -0.0573 -- 14.96 773 -- --
113.54 0.5 3.52 -0.0176 0.326 -- -0.557 -- -0.0798 6.63 -- -- -- --
114.33 0.501 3.51 -0.0261 0.324 -- -- -- -0.0782 6.63 -- -- -- --
116.36 0.505 3.51 0.073 -- 0.96 -- -- -0.0459 -- 18.12 114 -- --
111 0.493 3.51 -- 0.324 0.918 -- -- -0.0603 6.74 18.12 114 -- --
119.8 0.511 3.52 -0.0184 -- -- -- -- -0.0717 -- -- -- -- --
114.34 0.5 3.51 -- 0.324 -- -- -- -0.0753 6.64 -- -- -- --
116.49 0.504 3.52 -- -- 0.914 -- -- -0.0548 -- 18.12 114 -- --
119.81 0.511 3.52 -- -- -- -- -- -0.0696 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 91.19 radiation 1.0 43200 < th dose dependent rect. 3 1
4 92.88 atmosphere 1005.0 30 > th dose independent rect. 2 1
5 92.92 radiation 1.0 4320 < th dose dependent rect. 3 1
7 92.96 atmosphere 1005.0 30 > th dose dependent rect. 2 1
10 92.97 wind 3.0 30 < th dose independent rect. 2 1
11 92.98 wind 3.0 30 < th dose dependent rect. 2 1
13 93.01 temperature 20.0 30 > th dose dependent rect. 2 1
23 93.06 wind 9.0 1440 < th dose independent rect. 3 1
24 93.06 temperature 10.0 1440 > th dose independent rect. 3 1
27 93.06 temperature 30.0 1440 < th dose independent rect. 3 1
31 93.06 humidity 50.0 1440 > th dose independent rect. 3 1
40 93.06 atmosphere 995.0 1440 > th dose independent rect. 3 1
41 93.06 radiation 1.0 1440 < th dose independent rect. 3 1
61 93.06 temperature 10.0 1440 > th dose independent rect. 4 23
72 93.12 wind 9.0 30 < th dose independent rect. 3 23
79 93.25 temperature 25.0 90 > th dose independent rect. 2 1
81 93.29 temperature 10.0 30 > th dose independent rect. 2 1
84 93.29 temperature 30.0 30 < th dose independent rect. 2 1
85 93.29 humidity 50.0 30 > th dose independent rect. 2 1
89 93.29 atmosphere 1010.0 30 < th dose independent rect. 2 1
91 93.29 radiation 1.0 30 < th dose independent rect. 2 1
96 93.29 precipitation 0.1 30 < th dose independent rect. 2 1
97 93.29 temperature 10.0 30 > th dose independent rect. 3 23
98 93.29 radiation 1.0 30 < th dose dependent rect. 2 1
103 93.29 precipitation 0.1 30 < th dose dependent rect. 2 1
104 93.33 humidity 50.0 30 > th dose dependent rect. 2 1
111 93.40 humidity 90.0 30 > th dose independent rect. 2 1
116 93.49 atmosphere 1000.0 30 > th dose independent rect. 3 23
122 93.68 atmosphere 1015.0 30 < th dose dependent rect. 2 1
124 93.71 temperature 30.0 30 < th dose dependent rect. 2 1
134 94.15 wind 1.0 30 > th dose independent rect. 2 1
175 95.06 precipitation 0.1 30 < th dose independent rect. 3 23
176 95.06 precipitation 0.1 30 < th dose dependent rect. 3 23
191 97.97 humidity 50.0 30 > th dose independent rect. 3 23
193 98.66 temperature 10.0 30 > th dose dependent rect. 3 23
227 101.98 wind 1.0 10 < th dose independent rect. 14 13
230 102.04 wind 1.0 10 < th dose independent rect. 17 10
254 102.73 wind 1.0 10 < th dose independent rect. 8 19
263 102.89 atmosphere 1015.0 720 < th dose independent rect. 3 8
294 103.55 temperature 25.0 270 > th dose dependent rect. 24 6
316 103.62 precipitation 0.1 720 < th dose independent rect. 23 16
324 103.62 precipitation 0.1 720 < th dose dependent rect. 23 16
330 103.72 humidity 90.0 90 < th dose independent rect. 2 1
336 103.79 temperature 30.0 30 < th dose independent rect. 3 23
340 104.08 atmosphere 1015.0 30 < th dose independent rect. 3 23
347 104.23 precipitation 0.1 720 < th dose independent rect. 3 8
348 104.23 precipitation 0.1 720 < th dose dependent rect. 3 8
349 104.25 wind 9.0 30 < th dose dependent rect. 3 23
357 104.43 atmosphere 1015.0 1440 < th dose independent rect. 3 1
358 104.44 wind 9.0 720 < th dose independent rect. 3 8
366 104.64 radiation 10.0 30 < th dose independent rect. 3 23
368 104.64 radiation 10.0 30 < th dose dependent rect. 3 23
377 104.89 atmosphere 1015.0 720 < th dose independent rect. 3 16
388 105.05 temperature 15.0 720 > th dose independent rect. 8 7
395 105.08 humidity 50.0 720 > th dose independent rect. 23 16
403 105.27 wind 9.0 720 < th dose independent rect. 15 8
417 105.42 temperature 10.0 720 > th dose independent rect. 15 8
418 105.42 temperature 10.0 720 > th dose independent rect. 23 16
422 105.45 temperature 10.0 720 > th dose independent rect. 3 8
423 105.45 atmosphere 995.0 720 > th dose independent rect. 3 8
424 105.45 temperature 10.0 720 > th dose independent rect. 11 16
425 105.47 atmosphere 995.0 720 > th dose independent rect. 23 16
428 105.48 wind 3.0 720 < th dose dependent rect. 2 1
433 105.54 humidity 50.0 720 > th dose independent rect. 3 8
434 105.56 temperature 10.0 720 > th dose dependent rect. 3 1
435 105.57 wind 1.0 30 < th dose dependent rect. 14 13
448 105.75 humidity 90.0 90 < th dose independent rect. 1 5
454 105.80 temperature 10.0 720 > th dose dependent rect. 3 12
464 105.86 precipitation 0.1 720 < th dose independent rect. 3 16
465 105.86 precipitation 0.1 720 < th dose dependent rect. 3 16
469 105.91 humidity 90.0 90 < th dose independent rect. 1 7
481 106.00 precipitation 0.1 720 < th dose independent rect. 15 8
483 106.00 precipitation 0.1 720 < th dose dependent rect. 15 8
485 106.01 wind 9.0 720 < th dose independent rect. 15 16
487 106.02 precipitation 0.1 720 < th dose independent rect. 7 8
488 106.02 temperature 15.0 90 > th dose independent rect. 3 12
490 106.02 precipitation 0.1 720 < th dose dependent rect. 7 8
493 106.04 temperature 25.0 1440 < th dose independent rect. 1 1
516 106.07 humidity 90.0 14400 > th dose dependent rect. 21 2
517 106.08 humidity 80.0 10 < th dose independent rect. 6 2
528 106.17 wind 7.0 90 < th dose independent rect. 3 12
540 106.22 humidity 90.0 10 > th dose independent rect. 24 3
554 106.28 humidity 80.0 14400 > th dose independent rect. 8 2
566 106.33 humidity 50.0 720 > th dose independent rect. 7 8
571 106.37 humidity 80.0 10 < th dose independent rect. 2 6
575 106.37 humidity 90.0 14400 > th dose dependent rect. 18 7
581 106.39 wind 9.0 720 < th dose independent rect. 19 8
595 106.50 humidity 90.0 14400 > th dose dependent rect. 17 10
608 106.59 humidity 90.0 14400 > th dose dependent rect. 15 13
610 106.60 temperature 25.0 720 < th dose independent rect. 6 6
617 106.63 radiation 10.0 30 > th dose independent rect. 7 1
619 106.64 atmosphere 1015.0 14400 < th dose independent rect. 19 1
624 106.66 wind 1.0 1440 > th dose independent rect. 2 1
625 106.66 radiation 1.0 14400 > th dose independent rect. 6 1
626 106.66 atmosphere 1015.0 14400 < th dose independent rect. 14 4
630 106.67 atmosphere 1015.0 14400 < th dose independent rect. 14 6
631 106.67 atmosphere 1015.0 14400 > th dose independent rect. 13 7
632 106.67 atmosphere 1015.0 14400 > th dose dependent rect. 12 4
633 106.67 atmosphere 1015.0 14400 > th dose dependent rect. 11 7
641 106.68 humidity 90.0 14400 > th dose dependent sin 15 NA
643 106.68 atmosphere 1015.0 14400 > th dose dependent rect. 13 1
648 106.69 atmosphere 1015.0 14400 > th dose independent rect. 14 1
649 106.69 radiation 1.0 14400 < th dose independent rect. 6 1
661 106.70 humidity 90.0 10 > th dose independent rect. 22 5
751 106.80 humidity 80.0 14400 < th dose independent rect. 8 3
755 106.80 temperature 10.0 720 > th dose dependent rect. 3 8
759 106.81 humidity 80.0 14400 > th dose independent rect. 7 6
766 106.82 humidity 80.0 14400 < th dose independent rect. 9 1
790 106.85 temperature 15.0 720 > th dose independent rect. 3 17
795 106.86 atmosphere 1015.0 14400 > th dose dependent sin 20 NA
798 106.86 humidity 90.0 14400 > th dose dependent rect. 7 22
799 106.87 humidity 80.0 14400 < th dose independent rect. 7 6
800 106.87 wind 1.0 10 > th dose independent rect. 21 14
823 106.90 humidity 90.0 14400 > th dose dependent rect. 7 1
845 106.92 humidity 90.0 14400 > th dose dependent rect. 16 18
862 106.94 wind 5.0 14400 < th dose independent rect. 9 3
863 106.94 radiation 1.0 720 > th dose independent rect. 8 7
887 106.96 wind 7.0 14400 < th dose independent rect. 9 1
904 106.97 humidity 90.0 10 > th dose independent rect. 9 18
914 106.98 humidity 90.0 720 < th dose independent rect. 24 1
939 107.00 wind 5.0 14400 < th dose independent rect. 11 1
950 107.01 atmosphere 995.0 720 > th dose independent rect. 7 8
960 107.02 wind 1.0 720 < th dose independent rect. 2 1