Os12g0222500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 19 protein.
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Os12g0222500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 19 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.88 | 0.679 | 5.06 | 3.81 | 0.853 | -2.45 | -0.343 | 4.39 | 3.17 | 19.5 | 26.84 | 5295 | -- | -- |
| 229.09 | 0.705 | 5.13 | 2.85 | 0.494 | -2.17 | -0.659 | -- | 3.1 | 18.5 | 26.63 | 5718 | -- | -- |
| 209.19 | 0.674 | 5.06 | 3.8 | 0.857 | -2.45 | -- | 4.35 | 3.17 | 19.5 | 26.84 | 5284 | -- | -- |
| 223.51 | 0.696 | 5.21 | 2.69 | 0.603 | -1.94 | -- | -- | 2.9 | 19.3 | 26.7 | 5676 | -- | -- |
| 240.03 | 0.722 | 5.02 | 3.82 | -- | -2.31 | -- | 4.09 | 3.25 | -- | 26.85 | 5655 | -- | -- |
| 353.23 | 0.881 | 5.29 | 1.79 | 0.743 | -- | -0.098 | -- | 2.54 | 18.7 | -- | -- | -- | -- |
| 353.25 | 0.88 | 5.29 | 1.79 | 0.743 | -- | -- | -- | 2.54 | 18.6 | -- | -- | -- | -- |
| 248.75 | 0.735 | 5.2 | 2.63 | -- | -1.99 | -- | -- | 2.9 | -- | 26.9 | 5671 | -- | -- |
| 367.47 | 0.893 | 5.31 | -- | 0.675 | -1.22 | -- | -- | 2.43 | 19.5 | 28.8 | 5415 | -- | -- |
| 382.01 | 0.913 | 5.27 | 1.78 | -- | -- | -- | -- | 2.53 | -- | -- | -- | -- | -- |
| 438.05 | 0.979 | 5.33 | -- | 0.721 | -- | -- | -- | 2.34 | 18.8 | -- | -- | -- | -- |
| 394.1 | 0.925 | 5.29 | -- | -- | -1.24 | -- | -- | 2.44 | -- | 28.8 | 5555 | -- | -- |
| 465.22 | 1.01 | 5.32 | -- | -- | -- | -- | -- | 2.33 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 210.14 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 8 | 211.91 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 18 | 212.61 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 20 | 212.70 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 35 | 213.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 18 |
| 36 | 213.14 | temperature | 25 | 1440 | > th | dose dependent | sin | 22 | NA |
| 82 | 213.86 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 91 | 213.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 18 |
| 95 | 214.00 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 20 |
| 168 | 214.42 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 193 | 214.52 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 243 | 214.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 249 | 214.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 21 |
| 287 | 215.01 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 384 | 215.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 430 | 216.09 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 522 | 216.71 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 854 | 219.01 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |