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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0222300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.13 (0.0203) R2 : 0.000306
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.016 (0.0428) R2dN8 : 0.000395 R2N8 : 0.000306
σ : 0.383
deviance : 67.34
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.61 0.375 3.11 0.27 0.295 -0.273 -1.99 1.81 0.079 12.6 0.1701 123 -- --
66.3 0.379 3.12 0.138 0.0176 -0.125 -0.238 -- 0.0336 13.6 49.9 457 -- --
66.22 0.382 3.12 0.146 0.159 -0.142 -- 0.154 0.0314 11.3 0.1701 123 -- --
65.82 0.378 3.12 0.163 0.154 -0.157 -- -- 0.051 12.2 0.04681 94 -- --
66.37 0.379 3.13 0.155 -- -0.0623 -- 0.208 0.0358 -- 0.06999 122 -- --
66.75 0.383 3.13 0.132 0.0108 -- 0.206 -- 0.0314 6.19 -- -- -- --
66.84 0.383 3.13 0.134 0.0162 -- -- -- 0.0305 3.33 -- -- -- --
66.58 0.38 3.13 0.15 -- -0.0518 -- -- 0.0335 -- 0.04998 117 -- --
66.33 0.379 3.11 -- 0.205 -0.207 -- -- 0.0622 12.3 0.04123 84 -- --
66.86 0.382 3.13 0.134 -- -- -- -- 0.0309 -- -- -- -- --
67.31 0.384 3.13 -- 0.0189 -- -- -- 0.0156 3.32 -- -- -- --
67.06 0.381 3.13 -- -- -0.053 -- -- 0.0235 -- 0.04858 104 -- --
67.34 0.383 3.13 -- -- -- -- -- 0.016 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.65 temperature 25.0 30 > th dose independent rect. 20 3
3 60.00 radiation 40.0 43200 < th dose dependent rect. 23 1
7 60.22 temperature 25.0 90 > th dose dependent rect. 20 3
8 60.22 atmosphere 1005.0 30 > th dose dependent rect. 19 4
13 60.44 temperature 25.0 30 > th dose independent rect. 22 1
17 60.46 wind 9.0 1440 < th dose independent rect. 23 1
18 60.46 temperature 10.0 1440 > th dose independent rect. 23 1
21 60.46 temperature 30.0 1440 < th dose independent rect. 23 1
25 60.46 humidity 50.0 1440 > th dose independent rect. 23 1
35 60.46 atmosphere 995.0 1440 > th dose independent rect. 23 1
36 60.46 radiation 1.0 1440 < th dose independent rect. 23 1
56 60.46 temperature 10.0 1440 > th dose independent rect. 24 23
59 60.46 radiation 1.0 1440 < th dose dependent rect. 23 1
66 60.52 temperature 20.0 30 > th dose dependent rect. 22 1
67 60.53 humidity 80.0 30 > th dose independent rect. 22 1
69 60.54 wind 3.0 30 < th dose independent rect. 22 1
71 60.54 atmosphere 1005.0 30 > th dose dependent rect. 22 1
77 60.58 atmosphere 1005.0 30 > th dose independent rect. 22 1
79 60.62 humidity 90.0 30 < th dose independent rect. 22 1
80 60.62 wind 5.0 30 < th dose dependent rect. 22 1
83 60.63 wind 1.0 30 > th dose independent rect. 22 1
88 60.64 temperature 10.0 30 > th dose independent rect. 22 1
90 60.64 temperature 30.0 30 < th dose independent rect. 22 1
91 60.64 humidity 50.0 30 > th dose independent rect. 22 1
95 60.64 atmosphere 1010.0 30 < th dose independent rect. 22 1
97 60.64 radiation 1.0 30 < th dose independent rect. 22 1
102 60.64 temperature 10.0 30 > th dose independent rect. 23 23
103 60.64 humidity 50.0 30 > th dose dependent rect. 22 1
106 60.64 radiation 1.0 30 < th dose dependent rect. 22 1
111 60.65 precipitation 0.1 30 < th dose independent rect. 22 1
112 60.65 precipitation 0.1 30 < th dose dependent rect. 22 1
118 60.81 atmosphere 1015.0 30 < th dose dependent rect. 22 1
121 60.89 wind 1.0 30 > th dose dependent rect. 22 1
124 60.91 humidity 90.0 30 < th dose dependent rect. 22 1
130 61.03 temperature 30.0 30 < th dose dependent rect. 22 1
173 61.48 atmosphere 1005.0 30 > th dose independent rect. 19 4
184 61.66 wind 5.0 30 < th dose independent rect. 19 4
186 61.66 atmosphere 995.0 30 > th dose independent rect. 23 23
189 61.71 precipitation 0.1 30 < th dose independent rect. 23 23
190 61.71 precipitation 0.1 30 < th dose dependent rect. 23 23
193 61.75 temperature 25.0 270 > th dose dependent rect. 19 1
203 61.82 wind 7.0 30 < th dose dependent rect. 19 4
207 61.97 humidity 80.0 30 > th dose independent rect. 18 5
212 62.05 wind 9.0 30 < th dose independent rect. 23 23
220 62.15 precipitation 0.1 1440 < th dose independent rect. 23 1
222 62.15 precipitation 0.1 1440 < th dose dependent rect. 23 1
227 62.20 atmosphere 1005.0 270 > th dose independent rect. 19 1
233 62.27 temperature 25.0 90 > th dose dependent rect. 19 10
239 62.37 temperature 25.0 30 > th dose independent rect. 20 9
254 62.59 temperature 10.0 30 > th dose dependent rect. 19 4
259 62.62 atmosphere 1000.0 270 > th dose dependent rect. 19 1
272 62.68 wind 3.0 10 < th dose independent rect. 20 1
273 62.71 radiation 10.0 43200 < th dose dependent rect. 20 4
277 62.74 wind 5.0 270 < th dose independent rect. 19 1
279 62.75 atmosphere 995.0 30 > th dose independent rect. 23 20
281 62.78 humidity 50.0 30 > th dose dependent rect. 19 4
282 62.78 temperature 25.0 10 > th dose dependent rect. 20 9
286 62.80 wind 1.0 30 > th dose independent rect. 19 4
290 62.80 temperature 10.0 30 > th dose dependent rect. 23 20
291 62.81 humidity 80.0 30 > th dose independent rect. 16 7
293 62.81 radiation 1.0 1440 < th dose dependent rect. 20 4
294 62.82 temperature 20.0 90 < th dose independent rect. 18 1
297 62.82 temperature 20.0 90 < th dose dependent rect. 18 1
313 62.85 precipitation 0.1 30 < th dose independent rect. 19 4
320 62.85 precipitation 0.1 30 < th dose dependent rect. 19 4
323 62.86 temperature 10.0 30 > th dose independent rect. 19 4
325 62.86 temperature 10.0 1440 > th dose independent rect. 20 4
328 62.86 temperature 30.0 30 < th dose independent rect. 19 4
329 62.86 temperature 30.0 1440 < th dose independent rect. 20 4
333 62.86 humidity 50.0 30 > th dose independent rect. 19 4
335 62.86 humidity 50.0 1440 > th dose independent rect. 20 4
342 62.86 atmosphere 995.0 1440 > th dose independent rect. 20 4
343 62.86 atmosphere 1010.0 30 < th dose independent rect. 19 4
345 62.86 radiation 1.0 30 < th dose independent rect. 19 4
350 62.86 radiation 1.0 1440 < th dose independent rect. 20 4
371 62.86 temperature 10.0 30 > th dose independent rect. 23 20
372 62.86 temperature 10.0 1440 > th dose independent rect. 24 20
375 62.86 radiation 1.0 30 < th dose dependent rect. 19 4
385 62.87 precipitation 0.1 30 < th dose independent rect. 23 20
388 62.87 precipitation 0.1 30 < th dose dependent rect. 23 20
389 62.88 wind 9.0 30 < th dose independent rect. 23 20
401 62.92 atmosphere 1005.0 30 > th dose independent rect. 19 2
408 62.94 humidity 50.0 30 > th dose independent rect. 23 20
415 62.96 humidity 50.0 30 > th dose independent rect. 23 23
430 63.07 wind 3.0 30 < th dose dependent rect. 20 1
437 63.11 wind 7.0 30 < th dose dependent rect. 19 2
495 63.21 radiation 1.0 90 < th dose dependent rect. 8 15
510 63.27 humidity 80.0 30 > th dose independent rect. 14 9
518 63.29 radiation 1.0 90 < th dose dependent rect. 1 22
520 63.30 temperature 30.0 10 < th dose dependent rect. 20 1
521 63.30 radiation 1.0 90 < th dose dependent rect. 3 20
541 63.37 humidity 90.0 90 > th dose dependent rect. 18 1
542 63.37 wind 5.0 10 < th dose dependent rect. 16 7
545 63.38 radiation 1.0 90 < th dose dependent rect. 12 11
548 63.39 temperature 25.0 30 > th dose independent rect. 4 1
549 63.39 wind 3.0 10 < th dose independent rect. 16 7
554 63.41 humidity 90.0 90 > th dose independent rect. 18 1
566 63.44 humidity 50.0 270 > th dose dependent rect. 19 1
569 63.45 temperature 10.0 270 > th dose dependent rect. 19 1
578 63.46 temperature 10.0 30 > th dose dependent rect. 23 8
581 63.48 radiation 1.0 90 < th dose independent rect. 8 15
584 63.49 precipitation 0.1 270 < th dose independent rect. 19 1
597 63.49 radiation 10.0 10 < th dose independent rect. 23 20
598 63.49 humidity 80.0 10 > th dose dependent rect. 20 1
599 63.49 precipitation 0.1 270 < th dose dependent rect. 19 1
600 63.49 humidity 60.0 30 > th dose dependent rect. 19 2
607 63.50 wind 3.0 270 > th dose independent rect. 19 1
609 63.50 humidity 80.0 30 > th dose independent rect. 12 11
629 63.52 temperature 10.0 30 > th dose dependent rect. 23 10
639 63.55 atmosphere 1015.0 30 < th dose independent rect. 23 20
643 63.56 humidity 90.0 30 < th dose independent rect. 20 3
651 63.57 humidity 60.0 270 > th dose independent rect. 19 1
660 63.59 radiation 1.0 43200 < th dose dependent rect. 20 2
664 63.60 temperature 10.0 270 > th dose independent rect. 19 1
665 63.60 temperature 30.0 270 < th dose independent rect. 19 1
668 63.60 atmosphere 1010.0 270 < th dose independent rect. 19 1
670 63.60 radiation 1.0 270 < th dose independent rect. 19 1
677 63.60 temperature 10.0 270 > th dose independent rect. 20 23
680 63.60 radiation 1.0 270 < th dose dependent rect. 19 1
699 63.64 radiation 1.0 90 < th dose independent rect. 12 11
704 63.65 wind 9.0 270 < th dose dependent rect. 19 1
708 63.66 humidity 50.0 1440 > th dose independent rect. 24 10
710 63.66 temperature 25.0 90 > th dose dependent rect. 4 1
716 63.67 precipitation 0.1 270 < th dose independent rect. 20 23
717 63.67 precipitation 0.1 270 < th dose dependent rect. 20 23
718 63.68 wind 5.0 10 < th dose dependent rect. 14 9
730 63.71 radiation 1.0 90 < th dose independent rect. 1 22
740 63.73 atmosphere 995.0 270 > th dose independent rect. 20 23
750 63.75 radiation 1.0 90 < th dose independent rect. 3 20
784 63.80 radiation 20.0 10 < th dose independent rect. 23 11
789 63.80 radiation 1.0 90 < th dose dependent rect. 17 23
798 63.81 atmosphere 995.0 30 > th dose dependent rect. 23 20
799 63.82 temperature 10.0 1440 > th dose independent rect. 24 8
802 63.82 temperature 30.0 1440 < th dose independent rect. 24 8
806 63.82 humidity 50.0 1440 > th dose independent rect. 24 8
811 63.82 atmosphere 995.0 1440 > th dose independent rect. 24 8
813 63.82 temperature 10.0 1440 > th dose independent rect. 8 16
823 63.84 radiation 40.0 30 < th dose independent rect. 23 10
824 63.84 wind 1.0 30 > th dose independent rect. 7 16
830 63.84 temperature 10.0 30 > th dose dependent rect. 23 23
833 63.85 temperature 10.0 1440 > th dose independent rect. 24 10
836 63.85 atmosphere 995.0 1440 > th dose independent rect. 24 10
837 63.85 temperature 10.0 1440 > th dose independent rect. 10 14
849 63.86 atmosphere 1005.0 30 > th dose dependent rect. 14 9
850 63.86 radiation 1.0 30 < th dose dependent rect. 19 13
859 63.87 atmosphere 995.0 30 > th dose independent rect. 21 22
864 63.87 radiation 40.0 30 < th dose dependent rect. 23 10
866 63.88 humidity 70.0 30 > th dose independent rect. 23 10
867 63.88 radiation 1.0 270 < th dose dependent rect. 11 9
871 63.88 radiation 1.0 30 < th dose dependent rect. 19 11
873 63.88 radiation 40.0 90 < th dose dependent rect. 19 16
878 63.89 precipitation 0.1 30 < th dose independent rect. 7 16
883 63.89 precipitation 0.1 30 < th dose dependent rect. 7 16
888 63.90 wind 3.0 10 < th dose independent rect. 14 9
890 63.90 wind 1.0 30 > th dose independent rect. 9 14
896 63.91 radiation 1.0 30 < th dose independent rect. 19 11
898 63.91 precipitation 0.1 30 < th dose independent rect. 9 14
899 63.91 temperature 30.0 30 < th dose independent rect. 23 23
903 63.91 precipitation 0.1 30 < th dose dependent rect. 9 14
907 63.91 radiation 1.0 90 < th dose dependent rect. 17 20
909 63.91 radiation 20.0 10 < th dose dependent rect. 23 20
915 63.92 radiation 1.0 270 < th dose dependent rect. 15 5
922 63.93 temperature 10.0 30 > th dose independent rect. 23 8
923 63.93 temperature 30.0 30 < th dose independent rect. 23 8
924 63.93 humidity 50.0 30 > th dose independent rect. 23 8
927 63.93 atmosphere 995.0 30 > th dose independent rect. 23 8
928 63.93 radiation 20.0 30 < th dose independent rect. 23 8
931 63.93 temperature 10.0 30 > th dose independent rect. 7 16
933 63.93 atmosphere 1015.0 30 < th dose independent rect. 7 16
938 63.94 wind 9.0 30 < th dose independent rect. 23 8
939 63.94 wind 9.0 30 < th dose independent rect. 23 10
940 63.94 temperature 10.0 30 > th dose independent rect. 23 10
941 63.94 temperature 30.0 30 < th dose independent rect. 23 10
942 63.94 humidity 50.0 30 > th dose independent rect. 23 10
944 63.94 atmosphere 995.0 30 > th dose independent rect. 23 10
946 63.94 temperature 10.0 30 > th dose independent rect. 9 14
948 63.94 atmosphere 1015.0 30 < th dose independent rect. 9 14
949 63.94 temperature 30.0 30 < th dose independent rect. 23 20
956 63.94 radiation 1.0 90 < th dose dependent rect. 17 17
957 63.95 humidity 90.0 10 < th dose independent rect. 4 1
960 63.95 precipitation 0.1 30 < th dose independent rect. 19 2
971 63.95 precipitation 0.1 30 < th dose dependent rect. 19 2
974 63.96 wind 1.0 30 > th dose independent rect. 19 2
975 63.96 temperature 10.0 30 > th dose independent rect. 19 2
977 63.96 temperature 30.0 30 < th dose independent rect. 19 2
978 63.96 humidity 50.0 30 > th dose independent rect. 19 2
982 63.96 atmosphere 1010.0 30 < th dose independent rect. 19 2
984 63.96 radiation 1.0 30 < th dose independent rect. 19 2
991 63.96 wind 9.0 30 < th dose independent rect. 9 14
992 63.96 wind 7.0 30 < th dose independent rect. 19 15
993 63.96 wind 9.0 30 < th dose independent rect. 7 16
994 63.96 temperature 10.0 30 > th dose independent rect. 21 22
996 63.96 radiation 1.0 30 < th dose dependent rect. 19 2