Os12g0220800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0220800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.26 | 0.558 | 6.71 | 0.791 | 0.899 | -0.525 | -0.164 | -4.51 | -3.67 | 23.2 | 0.8494 | 4286 | -- | -- |
| 152.72 | 0.576 | 6.86 | 0.00116 | 0.955 | -0.624 | 0.266 | -- | -4.04 | 23.7 | 39.98 | 7611 | -- | -- |
| 141.28 | 0.554 | 6.69 | 0.81 | 0.907 | -0.56 | -- | -4.65 | -3.67 | 23.2 | 0.659 | 4290 | -- | -- |
| 151.95 | 0.574 | 6.86 | -0.0493 | 0.982 | -0.444 | -- | -- | -3.97 | 23.3 | 28.22 | 16139 | -- | -- |
| 167.98 | 0.607 | 6.8 | -0.0813 | -- | 0.658 | -- | -0.0866 | -3.84 | -- | 0.8312 | 4116 | -- | -- |
| 159.58 | 0.592 | 6.82 | -0.126 | 0.943 | -- | 0.127 | -- | -3.85 | 23.3 | -- | -- | -- | -- |
| 159.65 | 0.592 | 6.82 | -0.131 | 0.943 | -- | -- | -- | -3.85 | 23.3 | -- | -- | -- | -- |
| 168.03 | 0.606 | 6.8 | -0.0827 | -- | 0.657 | -- | -- | -3.84 | -- | 0.8312 | 4116 | -- | -- |
| 151.63 | 0.574 | 6.85 | -- | 0.941 | -0.446 | -- | -- | -3.99 | 23.3 | 67.73 | 16138 | -- | -- |
| 215.3 | 0.686 | 6.8 | -0.107 | -- | -- | -- | -- | -3.84 | -- | -- | -- | -- | -- |
| 160.1 | 0.592 | 6.82 | -- | 0.942 | -- | -- | -- | -3.84 | 23.3 | -- | -- | -- | -- |
| 159.54 | 0.59 | 6.8 | -- | -- | 0.763 | -- | -- | -3.83 | -- | 10 | 14042 | -- | -- |
| 215.6 | 0.685 | 6.8 | -- | -- | -- | -- | -- | -3.83 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.75 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 9 |
| 4 | 137.81 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 12 | 138.03 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 20 | 138.13 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 49 | 138.42 | temperature | 20 | 14400 | > th | dose independent | sin | 11 | NA |
| 74 | 138.61 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 86 | 138.69 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 100 | 138.78 | temperature | 20 | 14400 | < th | dose independent | sin | 11 | NA |
| 110 | 138.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 17 |
| 339 | 139.68 | temperature | 30 | 720 | < th | dose dependent | sin | 22 | NA |
| 352 | 139.74 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 374 | 139.81 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 375 | 139.81 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 23 |
| 390 | 139.85 | temperature | 20 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 425 | 139.96 | temperature | 25 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 465 | 140.06 | temperature | 15 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 489 | 140.15 | temperature | 20 | 14400 | < th | dose independent | no | NA | NA |
| 498 | 140.18 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 510 | 140.23 | temperature | 20 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 514 | 140.25 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 581 | 140.45 | temperature | 25 | 14400 | < th | dose dependent | rect. | 7 | 22 |
| 630 | 140.53 | temperature | 25 | 14400 | < th | dose dependent | rect. | 2 | 21 |
| 649 | 140.55 | temperature | 25 | 14400 | < th | dose dependent | rect. | 17 | 20 |
| 676 | 140.57 | temperature | 25 | 14400 | < th | dose dependent | no | NA | NA |
| 727 | 140.59 | temperature | 25 | 14400 | < th | dose dependent | sin | 16 | NA |
| 739 | 140.60 | temperature | 25 | 14400 | < th | dose dependent | sin | 2 | NA |
| 775 | 140.62 | temperature | 25 | 14400 | < th | dose dependent | rect. | 3 | 12 |
| 812 | 140.64 | temperature | 25 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 884 | 140.68 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 4 |