Os12g0219700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0219700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.02 | 0.293 | 13.6 | 0.0387 | 1.13 | -0.655 | -0.233 | 0.727 | -0.366 | 22.5 | 49.71 | 4159 | -- | -- |
| 39.06 | 0.291 | 13.6 | -0.0926 | 1.14 | -0.372 | -0.0965 | -- | -0.381 | 22.5 | 53 | 2468 | -- | -- |
| 39.24 | 0.292 | 13.6 | 0.047 | 1.13 | -0.653 | -- | 0.691 | -0.366 | 22.5 | 49.69 | 4139 | -- | -- |
| 39.15 | 0.291 | 13.6 | -0.0895 | 1.15 | -0.371 | -- | -- | -0.382 | 22.6 | 53 | 2468 | -- | -- |
| 114.96 | 0.502 | 13.6 | -0.153 | -- | -0.498 | -- | 0.114 | -0.324 | -- | 50.42 | 3064 | -- | -- |
| 42.55 | 0.306 | 13.6 | -0.189 | 1.1 | -- | -0.289 | -- | -0.312 | 22.5 | -- | -- | -- | -- |
| 42.89 | 0.307 | 13.6 | -0.177 | 1.1 | -- | -- | -- | -0.312 | 22.5 | -- | -- | -- | -- |
| 113.31 | 0.496 | 13.6 | 0.00622 | -- | -0.5 | -- | -- | -0.317 | -- | 49 | 7266 | -- | -- |
| 39.32 | 0.292 | 13.6 | -- | 1.15 | -0.402 | -- | -- | -0.38 | 22.6 | 53.01 | 2468 | -- | -- |
| 117.39 | 0.506 | 13.6 | -0.158 | -- | -- | -- | -- | -0.307 | -- | -- | -- | -- | -- |
| 43.71 | 0.309 | 13.6 | -- | 1.1 | -- | -- | -- | -0.292 | 22.5 | -- | -- | -- | -- |
| 113.23 | 0.496 | 13.6 | -- | -- | -0.507 | -- | -- | -0.311 | -- | 49 | 7300 | -- | -- |
| 118.05 | 0.507 | 13.6 | -- | -- | -- | -- | -- | -0.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.88 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 2 | 35.99 | wind | 3 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 3 | 36.00 | wind | 3 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 6 | 36.14 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 7 | 36.14 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 8 | 36.14 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 11 | 36.17 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 12 | 36.18 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 9 |
| 17 | 36.21 | humidity | 60 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 32 | 36.37 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 50 | 36.47 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 53 | 36.49 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 76 | 36.59 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 96 | 36.69 | wind | 3 | 14400 | < th | dose independent | sin | 10 | NA |
| 102 | 36.70 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 139 | 36.79 | wind | 5 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 156 | 36.82 | wind | 3 | 14400 | > th | dose independent | sin | 10 | NA |
| 165 | 36.83 | wind | 1 | 14400 | > th | dose dependent | rect. | 24 | 14 |
| 214 | 36.89 | wind | 9 | 14400 | < th | dose dependent | rect. | 24 | 14 |
| 238 | 36.93 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 272 | 36.97 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 358 | 37.06 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 361 | 37.06 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 378 | 37.07 | wind | 1 | 14400 | > th | dose dependent | sin | 7 | NA |
| 382 | 37.07 | wind | 1 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 387 | 37.08 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 390 | 37.08 | wind | 5 | 14400 | < th | dose dependent | sin | 8 | NA |
| 399 | 37.09 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 427 | 37.11 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 442 | 37.12 | wind | 1 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 492 | 37.16 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 533 | 37.20 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 562 | 37.22 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 571 | 37.23 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 638 | 37.27 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 781 | 37.35 | wind | 3 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 893 | 37.43 | wind | 3 | 14400 | < th | dose independent | rect. | 21 | 1 |