Os12g0216000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0216000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 195.18 | 0.656 | 5.48 | -0.81 | 1.9 | 0.371 | 3.4 | -8.19 | -1.6 | 18.9 | 38 | 1817 | 6.34 | -- |
| 270.59 | 0.766 | 5.6 | -0.0237 | 2.01 | 1.46 | 3.15 | -- | -1.69 | 18.8 | 57.07 | 1372 | 4.6 | -- |
| 217.09 | 0.686 | 5.48 | -0.809 | 1.94 | 0.36 | -- | -7.67 | -1.59 | 18.8 | 42.23 | 1625 | 6.27 | -- |
| 257.04 | 0.747 | 5.42 | 0.561 | 1.99 | 3.31 | -- | -- | -1.2 | 19 | 67.32 | 1784 | 2.83 | -- |
| 412.64 | 0.946 | 5.43 | -0.616 | -- | 0.722 | -- | -7.72 | -1.55 | -- | 43.05 | 1911 | 6.36 | -- |
| 310.28 | 0.826 | 5.52 | -0.281 | 2.01 | -- | 2.6 | -- | -1.51 | 18.7 | -- | -- | -- | -- |
| 326.83 | 0.847 | 5.51 | -0.319 | 2.02 | -- | -- | -- | -1.5 | 18.5 | -- | -- | -- | -- |
| 422.68 | 0.958 | 5.46 | -0.259 | -- | 1.8 | -- | -- | -1.52 | -- | 34.25 | 678 | 6.18 | -- |
| 258.35 | 0.749 | 5.47 | -- | 2.12 | 3.14 | -- | -- | -1.32 | 18.7 | 64.79 | 1904 | 1.65 | -- |
| 540.12 | 1.09 | 5.47 | -0.369 | -- | -- | -- | -- | -1.55 | -- | -- | -- | -- | -- |
| 329.51 | 0.849 | 5.5 | -- | 2.03 | -- | -- | -- | -1.47 | 18.5 | -- | -- | -- | -- |
| 423.15 | 0.958 | 5.48 | -- | -- | 1.91 | -- | -- | -1.6 | -- | 35.5 | 676 | 6.08 | -- |
| 543.72 | 1.09 | 5.46 | -- | -- | -- | -- | -- | -1.5 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 186.05 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 16 |
| 22 | 186.63 | temperature | 15 | 43200 | < th | dose dependent | sin | 4 | NA |
| 37 | 186.80 | temperature | 15 | 43200 | < th | dose dependent | rect. | 12 | 20 |
| 53 | 186.91 | temperature | 15 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 54 | 186.91 | temperature | 15 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 69 | 186.96 | temperature | 15 | 43200 | < th | dose dependent | rect. | 19 | 23 |
| 74 | 186.98 | temperature | 15 | 43200 | < th | dose dependent | no | NA | NA |
| 93 | 187.06 | temperature | 15 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 126 | 187.17 | temperature | 15 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 218 | 187.84 | temperature | 15 | 43200 | < th | dose dependent | sin | 15 | NA |
| 368 | 190.80 | temperature | 15 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 399 | 192.04 | temperature | 15 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 447 | 194.46 | temperature | 15 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 457 | 195.01 | temperature | 15 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 461 | 195.04 | temperature | 15 | 43200 | < th | dose independent | rect. | 23 | 19 |
| 465 | 195.09 | temperature | 15 | 43200 | < th | dose independent | rect. | 12 | 21 |
| 467 | 195.11 | temperature | 15 | 43200 | < th | dose independent | rect. | 12 | 16 |
| 488 | 195.31 | temperature | 15 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 497 | 195.35 | temperature | 15 | 43200 | < th | dose independent | rect. | 6 | 22 |
| 528 | 195.49 | temperature | 15 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 536 | 195.50 | temperature | 15 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 540 | 195.52 | temperature | 15 | 43200 | < th | dose independent | sin | 3 | NA |
| 545 | 195.54 | temperature | 15 | 43200 | < th | dose independent | no | NA | NA |
| 546 | 195.54 | temperature | 15 | 43200 | > th | dose independent | rect. | 12 | 16 |
| 578 | 195.64 | temperature | 15 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 605 | 195.72 | temperature | 15 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 626 | 195.78 | temperature | 15 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 649 | 195.85 | temperature | 15 | 43200 | < th | dose independent | sin | 14 | NA |
| 652 | 195.86 | temperature | 15 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 653 | 195.86 | temperature | 15 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 667 | 195.90 | temperature | 15 | 43200 | > th | dose independent | rect. | 6 | 22 |
| 735 | 196.12 | temperature | 15 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 737 | 196.12 | temperature | 15 | 43200 | > th | dose independent | rect. | 12 | 21 |
| 809 | 196.32 | temperature | 15 | 43200 | > th | dose independent | rect. | 22 | 22 |
| 819 | 196.36 | temperature | 15 | 43200 | > th | dose independent | sin | 16 | NA |
| 841 | 196.41 | temperature | 15 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 862 | 196.48 | temperature | 15 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 882 | 196.52 | temperature | 15 | 43200 | < th | dose independent | rect. | 22 | 6 |
| 892 | 196.56 | temperature | 15 | 43200 | > th | dose independent | no | NA | NA |
| 896 | 196.56 | temperature | 15 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 960 | 196.72 | temperature | 15 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 974 | 196.78 | temperature | 15 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 984 | 196.82 | temperature | 15 | 43200 | > th | dose independent | sin | 1 | NA |