Os12g0212400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0212400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 210.57 | 0.682 | 6.57 | 1.16 | 0.159 | -1.35 | -0.202 | 0.0605 | -3.56 | 1.68 | 22.99 | 609 | -- | -- |
| 210.48 | 0.676 | 6.57 | 1.18 | 0.186 | -1.37 | -0.209 | -- | -3.54 | 1.44 | 22.85 | 536 | -- | -- |
| 210.67 | 0.676 | 6.57 | 1.17 | 0.188 | -1.36 | -- | 0.0938 | -3.56 | 1.5 | 22.94 | 536 | -- | -- |
| 210.68 | 0.676 | 6.57 | 1.18 | 0.188 | -1.38 | -- | -- | -3.55 | 1.49 | 22.92 | 536 | -- | -- |
| 211.67 | 0.678 | 6.58 | 1.14 | -- | -1.38 | -- | 0.0732 | -3.57 | -- | 23.1 | 860 | -- | -- |
| 233.41 | 0.716 | 6.53 | 1.51 | 0.246 | -- | -0.22 | -- | -3.35 | 23.7 | -- | -- | -- | -- |
| 233.62 | 0.716 | 6.53 | 1.52 | 0.247 | -- | -- | -- | -3.34 | 23.6 | -- | -- | -- | -- |
| 211.68 | 0.678 | 6.58 | 1.14 | -- | -1.4 | -- | -- | -3.57 | -- | 23.1 | 863 | -- | -- |
| 227.85 | 0.703 | 6.63 | -- | 0.237 | -1.39 | -- | -- | -3.77 | 0.0884 | 19.44 | 47520 | -- | -- |
| 237.46 | 0.72 | 6.52 | 1.52 | -- | -- | -- | -- | -3.34 | -- | -- | -- | -- | -- |
| 294.2 | 0.802 | 6.57 | -- | 0.266 | -- | -- | -- | -3.51 | 24 | -- | -- | -- | -- |
| 231.18 | 0.708 | 6.62 | -- | -- | -1.4 | -- | -- | -3.79 | -- | 19.58 | 47520 | -- | -- |
| 298.64 | 0.807 | 6.56 | -- | -- | -- | -- | -- | -3.51 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 205.74 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 5 | 207.65 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 6 | 208.12 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 8 | 208.37 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 16 | 208.86 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 17 | 208.87 | wind | 9 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 18 | 208.90 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 21 | 209.03 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 23 | 209.18 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 25 | 209.26 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 41 | 209.50 | wind | 3 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 51 | 209.58 | wind | 9 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 52 | 209.58 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 54 | 209.59 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 56 | 209.59 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 62 | 209.64 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 65 | 209.66 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 79 | 209.72 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 98 | 209.83 | wind | 9 | 14400 | < th | dose dependent | rect. | 23 | 14 |
| 114 | 209.91 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 117 | 209.94 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 16 |
| 129 | 210.00 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 154 | 210.08 | wind | 1 | 14400 | > th | dose dependent | sin | 8 | NA |
| 157 | 210.09 | wind | 9 | 14400 | < th | dose dependent | sin | 8 | NA |
| 212 | 210.25 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 226 | 210.29 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 227 | 210.30 | wind | 3 | 14400 | < th | dose independent | sin | 9 | NA |
| 280 | 210.40 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 336 | 210.53 | wind | 3 | 14400 | > th | dose independent | sin | 9 | NA |
| 346 | 210.55 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 365 | 210.61 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 376 | 210.63 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 432 | 210.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 445 | 210.79 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 476 | 210.84 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 494 | 210.87 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 549 | 211.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 14 | 22 |
| 568 | 211.05 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 569 | 211.05 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 575 | 211.06 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 594 | 211.11 | humidity | 80 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 638 | 211.18 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 783 | 211.45 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 833 | 211.55 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 13 |
| 930 | 211.74 | wind | 3 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 970 | 211.80 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 984 | 211.83 | humidity | 80 | 43200 | > th | dose independent | rect. | 5 | 2 |