Os12g0209800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0209800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.69 | 0.414 | 10.5 | 0.835 | 2.7 | -0.712 | 0.112 | -0.499 | 0.709 | 15.6 | 85 | 1203 | -- | -- |
| 77.94 | 0.411 | 10.5 | 0.887 | 2.69 | -0.755 | 0.205 | -- | 0.702 | 15.7 | 83.64 | 1166 | -- | -- |
| 77.72 | 0.411 | 10.5 | 0.835 | 2.7 | -0.706 | -- | -0.547 | 0.707 | 15.6 | 84.41 | 1206 | -- | -- |
| 78.04 | 0.411 | 10.5 | 0.889 | 2.7 | -0.765 | -- | -- | 0.714 | 15.7 | 84 | 1168 | -- | -- |
| 306.25 | 0.82 | 10.5 | 0.696 | -- | 2.9 | -- | -0.471 | 0.637 | -- | 95 | 1160 | -- | -- |
| 89.84 | 0.444 | 10.5 | 0.779 | 2.82 | -- | 0.249 | -- | 0.728 | 15.5 | -- | -- | -- | -- |
| 90.04 | 0.444 | 10.5 | 0.783 | 2.82 | -- | -- | -- | 0.729 | 15.5 | -- | -- | -- | -- |
| 306.54 | 0.819 | 10.5 | 0.703 | -- | 2.93 | -- | -- | 0.637 | -- | 123.8 | 1160 | -- | -- |
| 96.55 | 0.458 | 10.5 | -- | 2.7 | -0.707 | -- | -- | 0.674 | 15.6 | 95 | 1255 | -- | -- |
| 533.9 | 1.08 | 10.5 | 0.665 | -- | -- | -- | -- | 0.655 | -- | -- | -- | -- | -- |
| 106.21 | 0.482 | 10.5 | -- | 2.8 | -- | -- | -- | 0.642 | 15.5 | -- | -- | -- | -- |
| 319.04 | 0.835 | 10.6 | -- | -- | 2.91 | -- | -- | 0.558 | -- | 202 | 47520 | -- | -- |
| 545.56 | 1.09 | 10.5 | -- | -- | -- | -- | -- | 0.581 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.85 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 2 | 64.48 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 3 | 64.48 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 4 | 64.51 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 8 | 64.70 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 9 | 64.81 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 3 |
| 10 | 64.81 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 17 | 65.10 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 19 | 65.10 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 20 | 65.10 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 23 | 65.10 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 24 | 65.10 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 26 | 65.10 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 29 | 65.10 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 30 | 65.14 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 33 | 65.28 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 34 | 65.31 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 49 | 65.83 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 82 | 66.06 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 83 | 66.08 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 21 |
| 84 | 66.08 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 96 | 66.59 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 119 | 66.83 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 120 | 66.89 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 126 | 67.00 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 159 | 68.09 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 160 | 68.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 163 | 68.09 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 167 | 68.09 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 172 | 68.09 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 173 | 68.09 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 174 | 68.09 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 178 | 68.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 191 | 68.26 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 192 | 68.26 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 207 | 68.54 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 210 | 68.61 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 236 | 68.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 22 |
| 312 | 69.03 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 409 | 69.24 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 21 |
| 423 | 69.47 | radiation | 40.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 426 | 69.48 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 453 | 69.79 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 455 | 69.80 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 489 | 69.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 13 |
| 490 | 69.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 565 | 70.48 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 20 | 6 |
| 581 | 70.61 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 618 | 70.86 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 686 | 70.96 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 21 |
| 700 | 71.04 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 18 | 11 |
| 701 | 71.04 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 18 | 11 |
| 702 | 71.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 13 |
| 704 | 71.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 13 |
| 803 | 71.50 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 805 | 71.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 11 |
| 809 | 71.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 11 |
| 814 | 71.54 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 830 | 71.60 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 854 | 71.64 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 875 | 71.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 11 |
| 876 | 71.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 13 |
| 877 | 71.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 13 |
| 878 | 71.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 13 |
| 894 | 71.75 | wind | 9.0 | 90 | < th | dose dependent | rect. | 15 | 15 |
| 937 | 71.83 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 9 | 20 |
| 939 | 71.83 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 9 | 20 |