Os12g0207200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0207200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.23 | 0.236 | 8.99 | -0.0568 | 0.421 | -0.455 | 0.133 | -0.48 | -0.0619 | 10.3 | 69.66 | 9735 | -- | -- |
| 24.86 | 0.232 | 8.99 | -0.0275 | 0.437 | -0.475 | 0.167 | -- | -0.0364 | 10.4 | 70 | 16236 | -- | -- |
| 25.3 | 0.234 | 8.99 | -0.0538 | 0.421 | -0.455 | -- | -0.499 | -0.062 | 10.2 | 69.59 | 9734 | -- | -- |
| 24.95 | 0.233 | 8.99 | -0.0167 | 0.44 | -0.48 | -- | -- | -0.0352 | 10.4 | 70.31 | 16236 | -- | -- |
| 35.7 | 0.278 | 9 | -0.0693 | -- | -0.523 | -- | -0.351 | -0.0619 | -- | 70 | 9638 | -- | -- |
| 29.04 | 0.253 | 9.01 | 0.0541 | 0.454 | -- | 0.166 | -- | -0.141 | 10.4 | -- | -- | -- | -- |
| 29.15 | 0.253 | 9.01 | 0.0605 | 0.453 | -- | -- | -- | -0.141 | 10.4 | -- | -- | -- | -- |
| 35.38 | 0.277 | 9 | -0.0145 | -- | -0.566 | -- | -- | -0.0184 | -- | 73 | 15292 | -- | -- |
| 24.96 | 0.233 | 8.99 | -- | 0.439 | -0.475 | -- | -- | -0.0347 | 10.4 | 70.46 | 16236 | -- | -- |
| 41.7 | 0.302 | 9.03 | 0.0532 | -- | -- | -- | -- | -0.142 | -- | -- | -- | -- | -- |
| 29.24 | 0.253 | 9.02 | -- | 0.453 | -- | -- | -- | -0.147 | 10.4 | -- | -- | -- | -- |
| 35.39 | 0.277 | 9 | -- | -- | -0.57 | -- | -- | -0.0148 | -- | 72.95 | 15290 | -- | -- |
| 41.77 | 0.302 | 9.03 | -- | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 2 | 23.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 13 | 24.51 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 15 | 24.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 16 | 24.54 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 28 | 24.67 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 39 | 24.75 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 41 | 24.76 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 45 | 24.78 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 46 | 24.78 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 9 |
| 50 | 24.78 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 55 | 24.79 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 80 | 24.83 | humidity | 90 | 14400 | > th | dose dependent | sin | 23 | NA |
| 82 | 24.84 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 5 |
| 89 | 24.84 | wind | 3 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 96 | 24.85 | humidity | 50 | 14400 | > th | dose dependent | rect. | 13 | 11 |
| 100 | 24.86 | humidity | 90 | 14400 | > th | dose independent | sin | 0 | NA |
| 105 | 24.86 | wind | 5 | 90 | < th | dose independent | rect. | 6 | 21 |
| 106 | 24.86 | humidity | 50 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 119 | 24.88 | temperature | 30 | 90 | < th | dose independent | rect. | 6 | 8 |
| 138 | 24.89 | wind | 9 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 171 | 24.91 | humidity | 90 | 14400 | < th | dose independent | sin | 0 | NA |
| 178 | 24.91 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 179 | 24.91 | humidity | 90 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 190 | 24.91 | humidity | 90 | 14400 | < th | dose dependent | rect. | 13 | 11 |
| 197 | 24.91 | humidity | 60 | 14400 | > th | dose dependent | rect. | 6 | 18 |
| 203 | 24.92 | humidity | 50 | 14400 | > th | dose dependent | sin | 17 | NA |
| 226 | 24.92 | humidity | 60 | 14400 | > th | dose dependent | rect. | 8 | 16 |
| 310 | 24.94 | humidity | 50 | 14400 | > th | dose dependent | rect. | 13 | 21 |
| 315 | 24.95 | temperature | 30 | 10 | < th | dose independent | rect. | 6 | 8 |
| 319 | 24.95 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 359 | 24.96 | humidity | 90 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 426 | 24.97 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 564 | 24.99 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 568 | 24.99 | humidity | 50 | 14400 | > th | dose dependent | no | NA | NA |
| 573 | 24.99 | humidity | 50 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 641 | 24.99 | humidity | 50 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 645 | 25.00 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 715 | 25.00 | humidity | 60 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 734 | 25.01 | humidity | 90 | 14400 | < th | dose dependent | sin | 18 | NA |
| 837 | 25.02 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 964 | 25.04 | humidity | 70 | 14400 | > th | dose dependent | rect. | 10 | 1 |