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Os12g0198400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.8 (0.023) R2 : 0.401
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.996 (0.0596) R2dC : 0.369 R2C : 0.351
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.264 (0.0483) R2dN8 : 0.0507 R2N8 : 0.0324
σ : 0.433
deviance : 85.5
__
_____
C
peak time of C : 19.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
70.45 0.394 6.77 0.436 1.15 0.769 0.354 0.307 0.406 18.9 27.22 3428 -- --
70.51 0.391 6.77 0.46 1.16 0.769 0.325 -- 0.409 18.9 27.65 3466 -- --
70.72 0.392 6.77 0.442 1.16 0.795 -- 0.108 0.413 18.8 26.33 3427 -- --
70.73 0.392 6.77 0.45 1.16 0.798 -- -- 0.415 18.8 26.33 3430 -- --
127.4 0.526 6.74 0.36 -- 0.479 -- 0.353 0.399 -- 43.21 5804 -- --
79.37 0.418 6.79 0.47 0.998 -- 0.457 -- 0.314 19.2 -- -- -- --
79.89 0.419 6.79 0.461 1 -- -- -- 0.315 19.1 -- -- -- --
125.89 0.523 6.75 0.4 -- 0.55 -- -- 0.368 -- 44.86 4359 -- --
76.12 0.406 6.78 -- 1.16 0.804 -- -- 0.405 18.9 30 3469 -- --
132.7 0.538 6.77 0.442 -- -- -- -- 0.297 -- -- -- -- --
85.5 0.433 6.8 -- 0.996 -- -- -- 0.264 19.1 -- -- -- --
130.05 0.531 6.76 -- -- 0.579 -- -- 0.33 -- 49.58 4360 -- --
137.85 0.548 6.78 -- -- -- -- -- 0.248 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.01 wind 7.0 270 < th dose independent rect. 16 10
2 66.11 wind 5.0 270 < th dose independent rect. 2 4
3 66.28 wind 9.0 270 < th dose dependent rect. 2 4
4 66.38 precipitation 0.1 270 < th dose independent rect. 2 4
5 66.38 precipitation 0.1 270 < th dose dependent rect. 2 4
8 66.58 radiation 10.0 10 < th dose dependent sin 12 NA
10 66.67 temperature 10.0 270 > th dose independent rect. 2 4
12 66.67 temperature 30.0 270 < th dose independent rect. 2 4
13 66.67 humidity 50.0 270 > th dose independent rect. 2 4
16 66.67 atmosphere 995.0 270 > th dose independent rect. 2 4
17 66.67 atmosphere 1015.0 270 < th dose independent rect. 2 4
18 66.67 radiation 20.0 270 < th dose independent rect. 2 4
21 66.67 temperature 10.0 270 > th dose independent rect. 6 20
22 66.69 precipitation 0.1 10 < th dose independent rect. 15 17
23 66.69 precipitation 0.1 10 < th dose dependent rect. 15 17
24 66.70 wind 9.0 270 < th dose independent rect. 6 20
27 66.88 temperature 30.0 270 < th dose dependent rect. 3 2
29 66.91 precipitation 0.1 270 < th dose independent rect. 6 20
30 66.91 radiation 40.0 270 < th dose dependent rect. 2 4
31 66.91 precipitation 0.1 270 < th dose dependent rect. 6 20
32 66.97 precipitation 0.1 270 < th dose independent rect. 1 6
33 66.97 precipitation 0.1 270 < th dose dependent rect. 1 6
34 66.98 wind 5.0 270 < th dose independent rect. 1 6
35 66.98 temperature 15.0 30 > th dose independent rect. 8 18
36 66.99 atmosphere 995.0 270 > th dose independent rect. 6 20
38 67.01 wind 1.0 30 > th dose independent rect. 8 7
41 67.07 wind 5.0 270 < th dose independent rect. 3 2
43 67.09 atmosphere 1010.0 270 < th dose independent rect. 1 6
44 67.09 temperature 10.0 10 > th dose independent rect. 8 7
46 67.09 atmosphere 995.0 10 > th dose independent rect. 8 7
47 67.09 atmosphere 1015.0 10 < th dose independent rect. 8 7
48 67.09 precipitation 0.1 10 < th dose independent rect. 8 7
49 67.09 temperature 10.0 10 > th dose independent rect. 15 17
51 67.09 precipitation 0.1 10 < th dose dependent rect. 8 7
52 67.10 wind 9.0 90 < th dose dependent rect. 2 6
53 67.13 wind 1.0 270 > th dose independent rect. 3 1
54 67.14 precipitation 0.1 270 < th dose independent rect. 3 2
56 67.14 precipitation 0.1 270 < th dose dependent rect. 3 2
57 67.15 temperature 15.0 270 > th dose independent rect. 7 18
62 67.17 wind 9.0 270 < th dose independent rect. 7 18
63 67.17 wind 9.0 270 < th dose dependent rect. 3 2
73 67.20 precipitation 0.1 270 < th dose independent rect. 2 14
74 67.20 precipitation 0.1 270 < th dose dependent rect. 2 14
76 67.22 temperature 10.0 270 > th dose independent rect. 1 6
78 67.22 temperature 30.0 270 < th dose independent rect. 1 6
79 67.22 humidity 50.0 270 > th dose independent rect. 1 6
81 67.22 atmosphere 995.0 270 > th dose independent rect. 1 6
83 67.22 radiation 30.0 270 < th dose independent rect. 1 6
86 67.22 humidity 50.0 270 > th dose dependent rect. 2 4
87 67.24 temperature 10.0 1440 > th dose independent rect. 9 7
90 67.24 temperature 10.0 1440 > th dose independent rect. 16 17
97 67.26 atmosphere 995.0 90 > th dose independent rect. 8 18
102 67.30 wind 9.0 30 < th dose independent rect. 15 17
103 67.30 atmosphere 1015.0 10 < th dose independent rect. 15 17
112 67.33 radiation 1.0 10 > th dose independent rect. 8 7
123 67.41 radiation 1.0 270 < th dose dependent rect. 3 2
126 67.43 precipitation 0.1 270 < th dose independent rect. 7 18
127 67.43 precipitation 0.1 270 < th dose dependent rect. 7 18
128 67.45 humidity 80.0 270 > th dose independent rect. 3 2
135 67.48 wind 9.0 10 < th dose independent rect. 8 7
140 67.49 temperature 10.0 270 > th dose independent rect. 3 2
142 67.49 temperature 30.0 270 < th dose independent rect. 3 2
143 67.49 humidity 50.0 270 > th dose independent rect. 3 2
146 67.49 atmosphere 995.0 270 > th dose independent rect. 3 2
147 67.49 atmosphere 1010.0 270 < th dose independent rect. 3 2
149 67.49 radiation 20.0 270 < th dose independent rect. 3 2
155 67.49 temperature 10.0 270 > th dose independent rect. 5 22
157 67.51 radiation 30.0 270 < th dose independent rect. 16 10
158 67.51 radiation 40.0 270 < th dose dependent rect. 3 2
163 67.53 temperature 30.0 90 < th dose independent rect. 8 7
164 67.53 radiation 40.0 270 < th dose dependent rect. 1 6
166 67.54 radiation 40.0 270 < th dose dependent rect. 15 11
172 67.56 wind 3.0 90 < th dose dependent rect. 4 3
174 67.58 atmosphere 1000.0 90 > th dose dependent rect. 2 6
175 67.59 temperature 10.0 270 > th dose independent rect. 16 10
177 67.59 temperature 10.0 270 > th dose independent rect. 2 14
178 67.59 atmosphere 1015.0 270 < th dose independent rect. 2 14
181 67.60 atmosphere 995.0 30 > th dose dependent rect. 8 7
182 67.61 radiation 1.0 270 < th dose independent rect. 3 2
187 67.63 wind 9.0 270 < th dose independent rect. 2 14
188 67.63 radiation 40.0 10 < th dose independent rect. 15 17
246 67.71 temperature 15.0 30 > th dose independent rect. 8 20
273 67.75 humidity 50.0 270 > th dose dependent rect. 3 2
277 67.76 wind 9.0 1440 < th dose independent rect. 3 6
278 67.76 temperature 10.0 1440 > th dose independent rect. 3 6
281 67.76 humidity 50.0 1440 > th dose independent rect. 3 6
283 67.76 atmosphere 995.0 1440 > th dose independent rect. 3 6
284 67.76 temperature 10.0 1440 > th dose independent rect. 9 18
287 67.76 wind 9.0 270 < th dose independent rect. 5 22
327 67.90 atmosphere 995.0 270 > th dose dependent rect. 2 4
329 67.90 humidity 50.0 270 > th dose dependent rect. 1 6
353 67.95 temperature 30.0 270 < th dose independent rect. 6 7
354 67.95 humidity 50.0 10 > th dose independent rect. 8 7
413 68.11 humidity 50.0 30 > th dose independent rect. 8 18
431 68.18 atmosphere 995.0 10 > th dose independent rect. 15 17
433 68.20 wind 1.0 270 > th dose independent rect. 2 3
451 68.28 wind 1.0 270 > th dose independent rect. 1 5
473 68.33 humidity 50.0 10 > th dose independent rect. 15 17
474 68.33 wind 1.0 270 > th dose independent rect. 7 18
477 68.34 radiation 20.0 270 < th dose dependent rect. 7 19
487 68.38 precipitation 0.1 270 < th dose independent rect. 16 10
488 68.38 precipitation 0.1 270 < th dose dependent rect. 16 10
503 68.40 wind 9.0 270 < th dose dependent rect. 16 10
571 68.52 atmosphere 995.0 270 > th dose independent rect. 16 10
705 68.81 atmosphere 1015.0 270 < th dose dependent rect. 3 2
722 68.86 atmosphere 995.0 270 > th dose independent rect. 2 14
744 68.89 radiation 1.0 90 > th dose dependent rect. 4 2
758 68.90 humidity 50.0 270 > th dose independent rect. 6 20
762 68.91 wind 9.0 270 < th dose independent rect. 6 7
812 68.98 radiation 1.0 270 > th dose independent rect. 6 6
838 69.04 atmosphere 1015.0 270 < th dose dependent rect. 2 4
852 69.05 humidity 50.0 270 > th dose independent rect. 6 7
859 69.05 temperature 10.0 270 > th dose dependent rect. 2 4
878 69.09 atmosphere 1005.0 10 > th dose independent rect. 5 3
902 69.13 atmosphere 1015.0 1440 < th dose independent rect. 4 5
915 69.15 atmosphere 1015.0 270 < th dose independent rect. 12 18
916 69.16 radiation 1.0 10 < th dose independent sin 12 NA
918 69.16 humidity 50.0 270 > th dose independent rect. 17 9
921 69.16 radiation 1.0 10 > th dose independent rect. 15 17
953 69.21 radiation 40.0 270 < th dose independent rect. 7 5
987 69.25 humidity 90.0 30 < th dose independent rect. 8 7