Os12g0197200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0197200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.8 | 0.422 | 7.43 | 0.573 | 0.784 | 0.625 | 0.344 | -0.534 | 0.262 | 19.6 | 0.4906 | 30 | -- | -- |
| 82.01 | 0.422 | 7.43 | 0.557 | 0.787 | 0.621 | -0.116 | -- | 0.263 | 19.7 | 0.4831 | 29 | -- | -- |
| 81.03 | 0.419 | 7.43 | 0.564 | 0.786 | 0.624 | -- | -0.407 | 0.261 | 19.6 | 0.4903 | 29 | -- | -- |
| 82.04 | 0.422 | 7.44 | 0.557 | 0.79 | 0.618 | -- | -- | 0.257 | 19.6 | 0.4824 | 29 | -- | -- |
| 103.38 | 0.476 | 7.41 | 0.557 | -- | 0.883 | -- | -0.479 | 0.263 | -- | 0.4903 | 29 | -- | -- |
| 89.7 | 0.444 | 7.45 | 0.486 | 1.29 | -- | -0.327 | -- | 0.249 | 21.6 | -- | -- | -- | -- |
| 90.1 | 0.445 | 7.45 | 0.499 | 1.3 | -- | -- | -- | 0.25 | 21.6 | -- | -- | -- | -- |
| 104.87 | 0.479 | 7.41 | 0.547 | -- | 0.88 | -- | -- | 0.259 | -- | 0.4903 | 29 | -- | -- |
| 89.9 | 0.444 | 7.45 | -- | 0.799 | 0.538 | -- | -- | 0.204 | 20.2 | 0.4824 | 29 | -- | -- |
| 189.59 | 0.643 | 7.42 | 0.509 | -- | -- | -- | -- | 0.247 | -- | -- | -- | -- | -- |
| 96.66 | 0.46 | 7.46 | -- | 1.3 | -- | -- | -- | 0.194 | 21.7 | -- | -- | -- | -- |
| 112.77 | 0.496 | 7.43 | -- | -- | 0.874 | -- | -- | 0.199 | -- | 0.4903 | 29 | -- | -- |
| 196.43 | 0.654 | 7.43 | -- | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.28 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 2 | 76.58 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 5 | 76.83 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 19 |
| 21 | 77.81 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 31 | 78.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 37 | 78.25 | radiation | 1.0 | 30 | < th | dose dependent | sin | 12 | NA |
| 47 | 78.42 | temperature | 25.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 63 | 78.66 | radiation | 1.0 | 90 | < th | dose independent | sin | 12 | NA |
| 95 | 78.94 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 97 | 78.96 | radiation | 1.0 | 30 | > th | dose independent | rect. | 17 | 16 |
| 104 | 79.04 | radiation | 1.0 | 90 | > th | dose independent | sin | 13 | NA |
| 115 | 79.11 | radiation | 1.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 146 | 79.29 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 150 | 79.30 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 163 | 79.35 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 168 | 79.36 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 202 | 79.53 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 218 | 79.65 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 222 | 79.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 10 |
| 229 | 79.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 230 | 79.70 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 233 | 79.71 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 250 | 79.79 | wind | 7.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 259 | 79.83 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 261 | 79.83 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 270 | 79.86 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 278 | 79.86 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 281 | 79.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 284 | 79.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 289 | 79.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 291 | 79.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 292 | 79.90 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 294 | 79.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 295 | 79.90 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 300 | 79.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 314 | 79.91 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 316 | 79.92 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 320 | 79.93 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 322 | 79.94 | humidity | 50.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 324 | 79.95 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 330 | 79.97 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 333 | 79.99 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 369 | 80.09 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 370 | 80.09 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 376 | 80.10 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 377 | 80.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 415 | 80.19 | temperature | 25.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 423 | 80.20 | temperature | 25.0 | 10 | > th | dose independent | rect. | 12 | 22 |
| 443 | 80.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 17 |
| 444 | 80.24 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 446 | 80.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 447 | 80.24 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 21 |
| 452 | 80.26 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 460 | 80.27 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 479 | 80.30 | humidity | 60.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 485 | 80.31 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 508 | 80.32 | temperature | 25.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 516 | 80.33 | temperature | 25.0 | 30 | > th | dose independent | rect. | 5 | 15 |
| 536 | 80.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 538 | 80.37 | radiation | 20.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 542 | 80.37 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 544 | 80.37 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 545 | 80.37 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 556 | 80.39 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 562 | 80.40 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 569 | 80.41 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 20 |
| 571 | 80.41 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 584 | 80.45 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 590 | 80.46 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 603 | 80.48 | radiation | 30.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 630 | 80.53 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 631 | 80.54 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 651 | 80.59 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 652 | 80.59 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 4 |
| 653 | 80.59 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 690 | 80.65 | wind | 7.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 692 | 80.65 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 694 | 80.65 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 695 | 80.65 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 697 | 80.65 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 698 | 80.65 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 699 | 80.65 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 715 | 80.67 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 732 | 80.70 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 737 | 80.71 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 743 | 80.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 749 | 80.73 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 767 | 80.75 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 787 | 80.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 791 | 80.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 794 | 80.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 796 | 80.79 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 797 | 80.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 798 | 80.79 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 799 | 80.79 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 800 | 80.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 801 | 80.79 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 802 | 80.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 812 | 80.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 813 | 80.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 817 | 80.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 836 | 80.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 6 |
| 837 | 80.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 842 | 80.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 861 | 80.84 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 7 |
| 880 | 80.85 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 901 | 80.89 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 942 | 80.93 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 5 |
| 954 | 80.94 | temperature | 25.0 | 30 | < th | dose independent | rect. | 18 | 23 |
| 955 | 80.94 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 960 | 80.95 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 965 | 80.96 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |