Os12g0193800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0193800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.44 | 0.362 | 9.29 | 0.71 | 1.18 | 0.217 | -0.693 | 2.53 | 0.145 | 20.5 | 43.4 | 98 | -- | -- |
| 62.75 | 0.369 | 9.3 | 0.676 | 1.17 | -0.438 | -1.06 | -- | 0.133 | 20.5 | 56.78 | 117 | -- | -- |
| 60.74 | 0.366 | 9.29 | 0.725 | 1.18 | 0.0234 | -- | 2.93 | 0.149 | 20.5 | 43.4 | 98 | -- | -- |
| 65.02 | 0.376 | 9.28 | 0.711 | 1.15 | -0.693 | -- | -- | 0.144 | 20.4 | 57.04 | 97 | -- | -- |
| 134.96 | 0.541 | 9.25 | 0.709 | -- | -0.365 | -- | 2.41 | 0.176 | -- | 44.89 | 98 | -- | -- |
| 64.16 | 0.376 | 9.28 | 0.724 | 1.18 | -- | -1.04 | -- | 0.163 | 20.6 | -- | -- | -- | -- |
| 67.61 | 0.385 | 9.28 | 0.757 | 1.19 | -- | -- | -- | 0.164 | 20.5 | -- | -- | -- | -- |
| 137.6 | 0.546 | 9.26 | 0.647 | -- | -1.22 | -- | -- | 0.114 | -- | 55.29 | 97 | -- | -- |
| 77.49 | 0.41 | 9.3 | -- | 1.13 | -1.06 | -- | -- | 0.0598 | 20.3 | 57.11 | 113 | -- | -- |
| 146.66 | 0.566 | 9.25 | 0.752 | -- | -- | -- | -- | 0.152 | -- | -- | -- | -- | -- |
| 82.74 | 0.425 | 9.3 | -- | 1.19 | -- | -- | -- | 0.0793 | 20.6 | -- | -- | -- | -- |
| 148.22 | 0.567 | 9.27 | -- | -- | -1.51 | -- | -- | 0.0364 | -- | 55.77 | 103 | -- | -- |
| 161.59 | 0.593 | 9.27 | -- | -- | -- | -- | -- | 0.0688 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.82 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 2 | 54.83 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 9 |
| 5 | 55.26 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 16 |
| 7 | 55.54 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 18 |
| 9 | 55.56 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 18 |
| 24 | 56.05 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 16 | 6 |
| 28 | 56.25 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 7 |
| 30 | 56.30 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 15 |
| 34 | 56.36 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 15 |
| 42 | 56.51 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 7 |
| 44 | 56.54 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 53 | 56.57 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 64 | 56.67 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 13 |
| 72 | 56.73 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 13 |
| 77 | 56.76 | temperature | 25.0 | 90 | < th | dose independent | rect. | 12 | 16 |
| 86 | 56.80 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 9 |
| 102 | 56.85 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 103 | 56.86 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 9 |
| 144 | 57.12 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 166 | 57.25 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 16 | 15 |
| 200 | 57.45 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 208 | 57.48 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 23 | 15 |
| 239 | 57.63 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 14 |
| 244 | 57.66 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 253 | 57.70 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 15 | 15 |
| 256 | 57.72 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 259 | 57.72 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 262 | 57.73 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 22 | 16 |
| 267 | 57.76 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 14 |
| 277 | 57.78 | temperature | 20.0 | 10 | > th | dose dependent | sin | 14 | NA |
| 282 | 57.80 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 10 |
| 294 | 57.83 | wind | 9.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 301 | 57.84 | wind | 5.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 303 | 57.85 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 316 | 57.87 | temperature | 25.0 | 270 | < th | dose independent | sin | 6 | NA |
| 329 | 57.91 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 330 | 57.91 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 340 | 57.94 | wind | 5.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 350 | 57.95 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 21 |
| 360 | 57.97 | temperature | 25.0 | 10 | > th | dose independent | rect. | 17 | 6 |
| 377 | 57.99 | temperature | 25.0 | 270 | > th | dose dependent | sin | 13 | NA |
| 382 | 58.00 | humidity | 80.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 387 | 58.00 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 17 |
| 398 | 58.01 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 399 | 58.02 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 402 | 58.02 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 408 | 58.04 | humidity | 80.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 421 | 58.04 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 425 | 58.05 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 6 |
| 438 | 58.07 | wind | 3.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 442 | 58.07 | radiation | 1.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 449 | 58.08 | temperature | 30.0 | 10 | < th | dose dependent | sin | 15 | NA |
| 468 | 58.12 | wind | 3.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 470 | 58.12 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 471 | 58.12 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 472 | 58.12 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 483 | 58.15 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 1 |
| 487 | 58.15 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 18 |
| 491 | 58.15 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 499 | 58.17 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 503 | 58.18 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 24 | 23 |
| 507 | 58.19 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 520 | 58.21 | temperature | 25.0 | 270 | > th | dose independent | sin | 6 | NA |
| 521 | 58.21 | wind | 5.0 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 538 | 58.23 | wind | 9.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 539 | 58.23 | temperature | 10.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 540 | 58.23 | temperature | 30.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 541 | 58.23 | humidity | 50.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 544 | 58.23 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 552 | 58.23 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 554 | 58.23 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 570 | 58.26 | wind | 5.0 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 629 | 58.31 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 20 | 10 |
| 632 | 58.31 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 636 | 58.32 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 661 | 58.35 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 673 | 58.36 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 23 | 6 |
| 687 | 58.36 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 697 | 58.37 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 707 | 58.38 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 748 | 58.41 | humidity | 50.0 | 10 | > th | dose independent | rect. | 23 | 18 |
| 820 | 58.46 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 23 | 18 |
| 837 | 58.48 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 854 | 58.49 | radiation | 1.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 884 | 58.52 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 916 | 58.54 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 940 | 58.56 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 960 | 58.56 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 978 | 58.58 | radiation | 1.0 | 10 | > th | dose independent | rect. | 17 | 20 |
| 979 | 58.58 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 987 | 58.59 | temperature | 25.0 | 10 | < th | dose independent | sin | 15 | NA |