FiT-DB / Search/ Help/ Sample detail

Os12g0189900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Las1-like family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.97 (0.0274) R2 : 0.268
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.831 (0.0705) R2dC : 0.224 R2C : 0.214
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.295 (0.0575) R2dN8 : 0.0544 R2N8 : 0.044
σ : 0.516
deviance : 121.56
__
_____
C
peak time of C : 19.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.13 0.456 8 -0.552 0.983 1.04 -0.0503 2.7 -0.387 21 16.99 73 -- --
102.38 0.471 8 -0.508 1.06 0.96 -0.812 -- -0.382 21.4 7.308 69 -- --
94.13 0.452 8 -0.552 0.986 1.04 -- 2.72 -0.387 21 16.66 72 -- --
105.15 0.478 8 -0.498 1.01 0.842 -- -- -0.378 21.1 7.629 69 -- --
138.93 0.549 7.98 -0.527 -- 0.609 -- 3.05 -0.39 -- 27.67 123 -- --
113.51 0.499 7.98 -0.516 0.823 -- -0.764 -- -0.35 19.8 -- -- -- --
115.11 0.502 7.98 -0.495 0.827 -- -- -- -0.35 19.6 -- -- -- --
126.91 0.525 7.99 -0.559 -- 0.825 -- -- -0.451 -- -8.394 829 -- --
111.62 0.492 7.98 -- 1.01 0.843 -- -- -0.324 21.1 7.312 69 -- --
151.78 0.576 7.97 -0.507 -- -- -- -- -0.362 -- -- -- -- --
121.56 0.516 7.97 -- 0.831 -- -- -- -0.295 19.5 -- -- -- --
135.12 0.541 7.97 -- -- 0.799 -- -- -0.386 -- -4.23 818 -- --
158.55 0.588 7.95 -- -- -- -- -- -0.306 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 84.29 temperature 15.0 90 > th dose dependent rect. 8 6
5 84.87 temperature 15.0 270 > th dose dependent rect. 8 3
8 85.15 temperature 15.0 270 > th dose dependent rect. 9 1
12 85.48 temperature 20.0 10 > th dose dependent rect. 8 6
25 85.96 temperature 10.0 10 > th dose dependent rect. 8 21
28 86.02 temperature 10.0 90 > th dose dependent rect. 8 20
33 86.12 temperature 15.0 270 > th dose independent rect. 10 22
42 86.36 temperature 15.0 90 > th dose independent rect. 14 18
46 86.71 radiation 40.0 90 < th dose independent rect. 13 19
70 87.74 wind 9.0 90 < th dose independent rect. 8 20
74 87.89 temperature 15.0 10 > th dose independent rect. 14 19
75 87.91 radiation 40.0 10 < th dose independent rect. 12 21
79 88.02 precipitation 0.1 90 < th dose independent rect. 4 4
81 88.02 precipitation 0.1 90 < th dose dependent rect. 4 4
84 88.06 wind 7.0 90 < th dose independent rect. 4 4
89 88.09 temperature 10.0 90 > th dose independent rect. 4 4
91 88.09 temperature 30.0 90 < th dose independent rect. 4 4
92 88.09 humidity 50.0 90 > th dose independent rect. 4 4
94 88.09 atmosphere 995.0 90 > th dose independent rect. 4 4
95 88.09 atmosphere 1015.0 90 < th dose independent rect. 4 4
97 88.09 temperature 10.0 90 > th dose independent rect. 8 20
103 88.21 radiation 40.0 90 < th dose independent rect. 4 4
104 88.24 precipitation 0.1 90 < th dose independent rect. 8 20
105 88.24 precipitation 0.1 90 < th dose dependent rect. 8 20
111 88.47 wind 9.0 270 < th dose independent rect. 6 21
119 88.66 humidity 50.0 90 > th dose independent rect. 8 6
120 88.68 wind 9.0 270 < th dose independent rect. 5 23
121 88.71 atmosphere 1015.0 90 < th dose independent rect. 8 20
123 88.72 temperature 10.0 90 > th dose dependent rect. 4 4
126 88.76 precipitation 0.1 90 < th dose independent rect. 8 6
127 88.76 precipitation 0.1 90 < th dose dependent rect. 8 6
129 88.87 atmosphere 995.0 90 > th dose independent rect. 14 18
130 88.88 temperature 10.0 43200 > th dose independent rect. 9 7
134 88.93 radiation 1.0 90 > th dose independent rect. 8 6
141 89.12 wind 9.0 90 < th dose dependent rect. 4 4
144 89.15 temperature 10.0 90 > th dose independent rect. 8 6
145 89.15 atmosphere 995.0 90 > th dose independent rect. 8 6
146 89.15 atmosphere 1015.0 90 < th dose independent rect. 8 6
155 89.26 radiation 1.0 90 > th dose dependent rect. 8 6
159 89.33 wind 9.0 90 < th dose independent rect. 8 6
175 89.36 temperature 10.0 270 > th dose independent rect. 6 21
180 89.47 radiation 40.0 270 < th dose dependent rect. 3 3
182 89.49 radiation 20.0 270 < th dose dependent rect. 3 4
194 89.57 wind 9.0 10 < th dose independent rect. 8 21
204 89.64 temperature 30.0 90 < th dose independent rect. 4 14
207 89.65 wind 1.0 90 > th dose independent rect. 8 6
210 89.67 atmosphere 995.0 270 > th dose independent rect. 11 21
211 89.69 precipitation 0.1 270 < th dose independent rect. 6 21
212 89.69 precipitation 0.1 270 < th dose dependent rect. 6 21
214 89.72 radiation 1.0 270 > th dose dependent rect. 8 3
216 89.74 wind 7.0 10 < th dose independent rect. 5 3
218 89.74 temperature 10.0 10 > th dose independent rect. 5 3
220 89.74 temperature 30.0 10 < th dose independent rect. 5 3
221 89.74 humidity 50.0 10 > th dose independent rect. 5 3
223 89.74 atmosphere 995.0 10 > th dose independent rect. 5 3
224 89.74 atmosphere 1015.0 10 < th dose independent rect. 5 3
225 89.74 temperature 10.0 10 > th dose independent rect. 8 21
231 89.76 humidity 60.0 270 > th dose independent rect. 8 3
232 89.77 precipitation 0.1 10 < th dose independent rect. 5 3
233 89.77 precipitation 0.1 10 < th dose dependent rect. 5 3
236 89.81 humidity 50.0 270 > th dose independent rect. 9 1
240 89.81 wind 9.0 90 < th dose independent rect. 14 18
243 89.82 humidity 50.0 10 > th dose independent rect. 9 5
273 89.94 wind 1.0 270 > th dose independent rect. 9 1
292 89.98 wind 9.0 270 < th dose dependent rect. 4 2
301 90.03 radiation 1.0 270 < th dose independent rect. 4 1
303 90.03 temperature 10.0 10 > th dose dependent rect. 5 3
310 90.06 precipitation 0.1 90 < th dose independent rect. 14 18
312 90.06 precipitation 0.1 90 < th dose dependent rect. 14 18
323 90.12 radiation 1.0 10 > th dose independent rect. 9 5
326 90.14 wind 9.0 270 < th dose independent rect. 17 10
328 90.16 temperature 10.0 270 > th dose independent rect. 9 1
329 90.16 atmosphere 995.0 270 > th dose independent rect. 9 1
330 90.16 atmosphere 1015.0 270 < th dose independent rect. 9 1
339 90.20 wind 9.0 270 < th dose independent rect. 9 1
354 90.23 precipitation 0.1 270 < th dose independent rect. 9 1
357 90.23 precipitation 0.1 270 < th dose dependent rect. 9 1
370 90.25 radiation 40.0 10 < th dose independent rect. 5 3
378 90.28 atmosphere 1015.0 10 < th dose independent rect. 8 21
385 90.34 atmosphere 995.0 270 > th dose independent rect. 3 14
386 90.35 radiation 1.0 10 > th dose independent rect. 5 3
408 90.41 atmosphere 995.0 10 > th dose independent rect. 14 19
419 90.44 radiation 1.0 90 < th dose dependent sin 12 NA
426 90.46 temperature 10.0 270 > th dose independent rect. 17 10
427 90.46 radiation 20.0 270 < th dose independent rect. 17 10
430 90.46 temperature 10.0 270 > th dose independent rect. 3 14
431 90.46 atmosphere 1015.0 270 < th dose independent rect. 3 14
472 90.57 humidity 90.0 90 < th dose independent rect. 8 6
475 90.59 temperature 10.0 10 > th dose independent rect. 9 5
477 90.59 atmosphere 995.0 10 > th dose independent rect. 9 5
478 90.59 atmosphere 1015.0 10 < th dose independent rect. 9 5
479 90.59 precipitation 0.1 10 < th dose independent rect. 9 5
482 90.59 precipitation 0.1 10 < th dose dependent rect. 9 5
486 90.61 humidity 50.0 90 > th dose independent rect. 14 18
490 90.62 temperature 10.0 1440 > th dose independent rect. 9 7
496 90.62 temperature 10.0 1440 > th dose independent rect. 16 17
501 90.64 atmosphere 995.0 90 > th dose independent rect. 8 20
513 90.66 wind 9.0 10 < th dose dependent rect. 5 4
520 90.68 humidity 50.0 270 > th dose dependent rect. 4 1
541 90.72 precipitation 0.1 10 < th dose independent rect. 14 19
542 90.72 precipitation 0.1 10 < th dose dependent rect. 14 19
543 90.73 wind 1.0 10 > th dose independent rect. 9 5
555 90.77 atmosphere 995.0 90 > th dose dependent rect. 4 4
559 90.79 temperature 10.0 270 > th dose dependent rect. 4 2
562 90.80 radiation 40.0 270 < th dose dependent rect. 16 11
578 90.82 precipitation 0.1 270 < th dose independent rect. 3 14
580 90.82 precipitation 0.1 270 < th dose dependent rect. 3 14
582 90.83 wind 9.0 10 < th dose independent rect. 9 5
584 90.83 wind 9.0 270 < th dose dependent rect. 8 3
588 90.85 precipitation 0.1 270 < th dose independent rect. 17 10
589 90.85 precipitation 0.1 270 < th dose dependent rect. 17 10
639 90.95 humidity 80.0 10 < th dose independent rect. 9 5
659 91.02 humidity 50.0 270 > th dose dependent rect. 3 3
661 91.02 radiation 40.0 90 < th dose dependent rect. 13 19
665 91.04 radiation 1.0 270 > th dose dependent rect. 9 1
668 91.05 temperature 30.0 90 < th dose independent rect. 13 19
677 91.07 radiation 1.0 270 > th dose dependent rect. 17 19
679 91.09 humidity 90.0 10 < th dose independent rect. 8 7
699 91.12 wind 9.0 10 < th dose independent rect. 14 19
766 91.23 radiation 1.0 270 > th dose independent rect. 8 3
800 91.29 radiation 1.0 270 > th dose independent rect. 9 1
804 91.29 precipitation 0.1 270 < th dose independent rect. 11 21
807 91.29 precipitation 0.1 270 < th dose dependent rect. 11 21
821 91.34 radiation 1.0 90 > th dose independent rect. 13 19
841 91.38 atmosphere 1015.0 270 < th dose independent rect. 6 21
885 91.46 radiation 10.0 270 < th dose dependent rect. 3 12
924 91.57 humidity 50.0 270 > th dose independent rect. 17 10
953 91.61 radiation 1.0 10 > th dose dependent rect. 8 6
974 91.67 radiation 40.0 10 < th dose dependent rect. 13 20
994 91.74 humidity 50.0 10 > th dose independent rect. 8 21