Os12g0188900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0188900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.3 | 0.232 | 9.57 | 0.0379 | 1.26 | 0.429 | -0.475 | -0.561 | -0.0347 | 7.62 | 22.9 | 23 | -- | -- |
| 24.74 | 0.232 | 9.57 | -0.0112 | 1.26 | 0.519 | -0.435 | -- | -0.0474 | 7.63 | 22.66 | 13 | -- | -- |
| 24.93 | 0.233 | 9.57 | 0.0259 | 1.26 | 0.439 | -- | -0.498 | -0.0327 | 7.63 | 22.9 | 22 | -- | -- |
| 25.26 | 0.234 | 9.57 | -0.0238 | 1.25 | 0.512 | -- | -- | -0.046 | 7.64 | 22.74 | 18 | -- | -- |
| 80.88 | 0.419 | 9.54 | 0.484 | -- | 1.4 | -- | -1.72 | 0.186 | -- | 45.59 | 527 | -- | -- |
| 27.86 | 0.247 | 9.59 | -0.123 | 1.25 | -- | -0.409 | -- | -0.109 | 7.42 | -- | -- | -- | -- |
| 28.32 | 0.249 | 9.59 | -0.132 | 1.25 | -- | -- | -- | -0.108 | 7.42 | -- | -- | -- | -- |
| 83.05 | 0.424 | 9.57 | 0.192 | -- | 1.35 | -- | -- | 0.108 | -- | 56.48 | 527 | -- | -- |
| 25.28 | 0.234 | 9.57 | -- | 1.26 | 0.526 | -- | -- | -0.0409 | 7.65 | 22.7 | 18 | -- | -- |
| 111.2 | 0.493 | 9.62 | -0.112 | -- | -- | -- | -- | -0.088 | -- | -- | -- | -- | -- |
| 28.78 | 0.251 | 9.59 | -- | 1.25 | -- | -- | -- | -0.0934 | 7.43 | -- | -- | -- | -- |
| 83.94 | 0.427 | 9.58 | -- | -- | 1.29 | -- | -- | 0.0781 | -- | 73.58 | 522 | -- | -- |
| 111.53 | 0.493 | 9.61 | -- | -- | -- | -- | -- | -0.0755 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.92 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 2 | 22.98 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 20 |
| 4 | 23.06 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 8 | 23.13 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 9 | 23.14 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 18 |
| 12 | 23.25 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 18 | 23.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 20 | 23.38 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 23 | 23.41 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 25 | 23.41 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 29 | 23.45 | temperature | 15 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 32 | 23.47 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 12 |
| 35 | 23.48 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 38 | 23.49 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 22 |
| 50 | 23.54 | temperature | 15 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 52 | 23.54 | temperature | 20 | 90 | > th | dose independent | rect. | 22 | 11 |
| 54 | 23.55 | temperature | 20 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 55 | 23.56 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 2 |
| 57 | 23.56 | temperature | 15 | 90 | > th | dose dependent | rect. | 15 | 17 |
| 60 | 23.57 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 61 | 23.57 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 76 | 23.60 | temperature | 15 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 79 | 23.60 | wind | 9 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 81 | 23.61 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 82 | 23.61 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 91 | 23.63 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 92 | 23.63 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 124 | 23.68 | wind | 7 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 126 | 23.68 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 127 | 23.69 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 135 | 23.71 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 8 |
| 142 | 23.72 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 154 | 23.74 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 157 | 23.75 | temperature | 15 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 161 | 23.75 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 18 |
| 190 | 23.78 | temperature | 15 | 10 | > th | dose dependent | rect. | 22 | 11 |
| 199 | 23.79 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 232 | 23.83 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 12 |
| 234 | 23.84 | wind | 3 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 258 | 23.86 | wind | 3 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 260 | 23.86 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 272 | 23.87 | temperature | 20 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 273 | 23.87 | temperature | 20 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 293 | 23.89 | temperature | 20 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 300 | 23.89 | wind | 5 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 301 | 23.89 | radiation | 1 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 315 | 23.91 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 324 | 23.91 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 376 | 23.95 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 423 | 23.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 441 | 23.99 | humidity | 90 | 14400 | > th | dose dependent | sin | 8 | NA |
| 448 | 24.00 | temperature | 15 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 469 | 24.01 | temperature | 15 | 14400 | > th | dose independent | rect. | 3 | 13 |
| 470 | 24.01 | temperature | 15 | 14400 | > th | dose independent | rect. | 3 | 18 |
| 473 | 24.02 | wind | 9 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 497 | 24.03 | temperature | 15 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 498 | 24.03 | temperature | 20 | 90 | > th | dose independent | rect. | 5 | 14 |
| 508 | 24.04 | humidity | 90 | 14400 | > th | dose independent | sin | 9 | NA |
| 527 | 24.04 | temperature | 20 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 533 | 24.05 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 551 | 24.05 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 562 | 24.06 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 576 | 24.06 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 6 |
| 580 | 24.07 | temperature | 15 | 14400 | > th | dose independent | sin | 7 | NA |
| 584 | 24.07 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 605 | 24.07 | temperature | 20 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 613 | 24.08 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 614 | 24.08 | humidity | 70 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 692 | 24.11 | humidity | 90 | 14400 | < th | dose independent | sin | 9 | NA |
| 735 | 24.12 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 738 | 24.12 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 758 | 24.13 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 796 | 24.15 | temperature | 20 | 90 | > th | dose independent | rect. | 5 | 23 |
| 884 | 24.19 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 14 |
| 905 | 24.20 | wind | 9 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 927 | 24.21 | humidity | 70 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 967 | 24.22 | radiation | 40 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 975 | 24.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 991 | 24.23 | radiation | 10 | 14400 | < th | dose dependent | rect. | 13 | 1 |