Os12g0182500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0182500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 457.76 | 1.01 | 5.29 | -2.69 | 0.802 | 2.57 | 0.617 | -5.83 | -0.997 | 11 | 27 | 873 | 13.9 | 11.2 |
| 470.65 | 1.01 | 5.23 | -1.79 | 0.689 | 2.03 | 1.1 | -- | -0.797 | 11.2 | 26.83 | 881 | 14 | 11.6 |
| 459.07 | 0.998 | 5.29 | -2.73 | 0.806 | 2.59 | -- | -6.24 | -0.978 | 11.3 | 27 | 872 | 14 | 14.8 |
| 474.5 | 1.01 | 5.18 | -1.69 | 0.666 | 2.1 | -- | -- | -0.73 | 12.1 | 26.8 | 881 | 14.8 | 12.8 |
| 486.42 | 1.03 | 5.28 | -2.49 | -- | 2.12 | -- | -5.32 | -0.88 | -- | 27.3 | 988 | 15.5 | 14.8 |
| 550.37 | 1.1 | 5.14 | -1.36 | 0.315 | -- | 2.26 | -- | -0.563 | 6.88 | -- | -- | -- | -- |
| 563.56 | 1.11 | 5.14 | -1.32 | 0.322 | -- | -- | -- | -0.569 | 6.76 | -- | -- | -- | -- |
| 493.28 | 1.03 | 5.16 | -1.6 | -- | 1.79 | -- | -- | -0.611 | -- | 26.98 | 905 | 16.8 | 11.9 |
| 545.75 | 1.09 | 5.13 | -- | 0.575 | 1.84 | -- | -- | -0.468 | 11.3 | 26.8 | 780 | 15.3 | 11.9 |
| 568.97 | 1.11 | 5.15 | -1.32 | -- | -- | -- | -- | -0.562 | -- | -- | -- | -- | -- |
| 609.78 | 1.16 | 5.11 | -- | 0.307 | -- | -- | -- | -0.421 | 7.02 | -- | -- | -- | -- |
| 556.85 | 1.1 | 5.12 | -- | -- | 1.61 | -- | -- | -0.415 | -- | 26.85 | 877 | 17.4 | 11.7 |
| 614.73 | 1.16 | 5.12 | -- | -- | -- | -- | -- | -0.416 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 482.95 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 3 | 483.37 | temperature | 25.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 76 | 490.38 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 78 | 490.46 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 151 | 499.46 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 155 | 500.24 | temperature | 25.0 | 720 | > th | dose independent | rect. | 13 | 11 |
| 157 | 500.34 | humidity | 70.0 | 720 | > th | dose independent | sin | 12 | NA |
| 169 | 501.10 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 170 | 501.11 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 174 | 501.19 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 14 |
| 175 | 501.24 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 8 |
| 183 | 501.43 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 198 | 501.81 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 2 |
| 214 | 501.87 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 15 |
| 244 | 502.39 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 290 | 502.97 | humidity | 90.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 378 | 503.87 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 440 | 504.37 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 18 |
| 445 | 504.45 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 448 | 504.46 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 468 | 504.62 | humidity | 70.0 | 720 | < th | dose independent | sin | 12 | NA |
| 469 | 504.62 | humidity | 90.0 | 720 | > th | dose independent | rect. | 21 | 3 |
| 540 | 505.00 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 13 | 14 |
| 553 | 505.04 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 567 | 505.09 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 19 | 23 |
| 581 | 505.13 | temperature | 25.0 | 720 | > th | dose independent | sin | 18 | NA |
| 607 | 505.35 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 615 | 505.42 | humidity | 90.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 681 | 505.87 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 17 | 10 |
| 684 | 505.87 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 758 | 506.49 | humidity | 90.0 | 30 | > th | dose independent | rect. | 18 | 9 |
| 833 | 507.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 834 | 507.02 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 838 | 507.02 | humidity | 90.0 | 30 | > th | dose independent | rect. | 13 | 14 |
| 846 | 507.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 848 | 507.04 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 887 | 507.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 956 | 507.81 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 999 | 508.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 2 |