Os12g0181600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter II family protein.
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Os12g0181600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Amino acid/polyamine transporter II family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 181.05 | 0.632 | 11.7 | 0.965 | 1.59 | -1.4 | 0.178 | 6.3 | -0.476 | 23.6 | 25.2 | 1246 | -- | -- |
| 188.57 | 0.64 | 11.8 | 0.0587 | 1.49 | -1.2 | 0.434 | -- | -0.412 | 23.4 | 18 | 16785 | -- | -- |
| 181.07 | 0.627 | 11.7 | 0.979 | 1.6 | -1.43 | -- | 6.61 | -0.477 | 23.5 | 25.29 | 1203 | -- | -- |
| 189.31 | 0.641 | 11.8 | 0.0123 | 1.49 | -1.17 | -- | -- | -0.412 | 23.5 | 18.3 | 16797 | -- | -- |
| 290.85 | 0.799 | 11.8 | -0.162 | -- | -1.75 | -- | 4.65 | -0.732 | -- | 25.29 | 1203 | -- | -- |
| 214.9 | 0.687 | 11.9 | -0.871 | 1.45 | -- | 0.361 | -- | -0.956 | 23.4 | -- | -- | -- | -- |
| 215.46 | 0.687 | 11.9 | -0.886 | 1.44 | -- | -- | -- | -0.958 | 23.4 | -- | -- | -- | -- |
| 280.79 | 0.784 | 11.8 | -0.518 | -- | -1.69 | -- | -- | -0.67 | -- | 19.73 | 7404 | -- | -- |
| 189.3 | 0.641 | 11.8 | -- | 1.49 | -1.17 | -- | -- | -0.414 | 23.5 | 18.3 | 16792 | -- | -- |
| 346.23 | 0.869 | 11.9 | -0.848 | -- | -- | -- | -- | -0.943 | -- | -- | -- | -- | -- |
| 236.14 | 0.719 | 11.9 | -- | 1.43 | -- | -- | -- | -0.859 | 23.4 | -- | -- | -- | -- |
| 287.57 | 0.792 | 11.8 | -- | -- | -1.8 | -- | -- | -0.597 | -- | 19.73 | 7404 | -- | -- |
| 365.19 | 0.892 | 11.9 | -- | -- | -- | -- | -- | -0.849 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 177.42 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 178.29 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 3 | 179.08 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 6 | 179.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 8 | 179.73 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 9 | 179.82 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 11 | 180.05 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 13 | 180.12 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 15 | 180.17 | radiation | 10 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 16 | 180.18 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 18 | 180.24 | radiation | 10 | 43200 | < th | dose independent | rect. | 21 | 10 |
| 19 | 180.24 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 18 |
| 20 | 180.25 | radiation | 10 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 45 | 180.50 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 49 | 180.50 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 12 |
| 52 | 180.50 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 53 | 180.51 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 55 | 180.51 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 66 | 180.55 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 69 | 180.58 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 70 | 180.61 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 78 | 180.84 | radiation | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 104 | 180.95 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 3 |
| 110 | 181.01 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 143 | 181.20 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 147 | 181.25 | radiation | 20 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 153 | 181.42 | radiation | 40 | 43200 | < th | dose independent | sin | 12 | NA |
| 187 | 181.56 | radiation | 40 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 203 | 181.65 | radiation | 30 | 43200 | < th | dose dependent | rect. | 24 | 6 |
| 232 | 181.69 | radiation | 10 | 43200 | < th | dose independent | sin | 11 | NA |
| 234 | 181.69 | radiation | 30 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 306 | 182.08 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 309 | 182.11 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 311 | 182.12 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 314 | 182.14 | radiation | 40 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 317 | 182.15 | radiation | 40 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 324 | 182.16 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 329 | 182.17 | radiation | 40 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 335 | 182.18 | radiation | 40 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 347 | 182.21 | radiation | 40 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 367 | 182.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 21 |
| 368 | 182.30 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 371 | 182.30 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 385 | 182.34 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 386 | 182.35 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 467 | 182.54 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 477 | 182.56 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 489 | 182.57 | radiation | 30 | 43200 | > th | dose dependent | rect. | 15 | 18 |
| 583 | 182.70 | wind | 1 | 43200 | < th | dose dependent | sin | 14 | NA |
| 584 | 182.70 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 650 | 182.81 | temperature | 25 | 1440 | > th | dose dependent | sin | 3 | NA |
| 699 | 182.90 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 700 | 182.90 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 714 | 182.92 | radiation | 40 | 43200 | > th | dose dependent | rect. | 14 | 21 |
| 715 | 182.93 | humidity | 90 | 43200 | > th | dose independent | sin | 14 | NA |
| 747 | 182.97 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 765 | 182.98 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 803 | 183.02 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 880 | 183.11 | humidity | 90 | 43200 | > th | dose dependent | sin | 13 | NA |
| 928 | 183.15 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 936 | 183.16 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 942 | 183.17 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 952 | 183.18 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 971 | 183.18 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |