Os12g0177200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0177200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.76 | 0.614 | 2.89 | 0.402 | 0.0716 | -1.01 | 0.0406 | -1.19 | 0.22 | 22.7 | 20.7 | 1954 | -- | -- |
| 173.47 | 0.613 | 2.85 | 0.65 | 0.0777 | -0.866 | -0.0168 | -- | 0.277 | 22.9 | 20.7 | 1960 | -- | -- |
| 170.76 | 0.609 | 2.89 | 0.402 | 0.072 | -1.01 | -- | -1.19 | 0.22 | 22.3 | 20.7 | 1954 | -- | -- |
| 173.46 | 0.613 | 2.85 | 0.643 | 0.0668 | -0.862 | -- | -- | 0.277 | 22.6 | 20.7 | 1960 | -- | -- |
| 171.08 | 0.609 | 2.88 | 0.402 | -- | -1 | -- | -1.18 | 0.219 | -- | 20.68 | 1954 | -- | -- |
| 190.28 | 0.647 | 2.89 | 0.244 | 0.00321 | -- | -0.457 | -- | 0.0619 | 17.7 | -- | -- | -- | -- |
| 190.72 | 0.647 | 2.89 | 0.246 | 0.0326 | -- | -- | -- | 0.0597 | 23.6 | -- | -- | -- | -- |
| 173.73 | 0.614 | 2.85 | 0.642 | -- | -0.858 | -- | -- | 0.276 | -- | 20.72 | 1954 | -- | -- |
| 179.39 | 0.624 | 2.86 | -- | 0.066 | -0.529 | -- | -- | 0.22 | 22.8 | 22.8 | 1390 | -- | -- |
| 190.79 | 0.645 | 2.89 | 0.247 | -- | -- | -- | -- | 0.06 | -- | -- | -- | -- | -- |
| 192.31 | 0.649 | 2.9 | -- | 0.0356 | -- | -- | -- | 0.0323 | 0.0324 | -- | -- | -- | -- |
| 179.57 | 0.624 | 2.86 | -- | -- | -0.526 | -- | -- | 0.214 | -- | 22.8 | 1439 | -- | -- |
| 192.39 | 0.647 | 2.9 | -- | -- | -- | -- | -- | 0.0327 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.02 | humidity | 80 | 10 | < th | dose dependent | rect. | 21 | 7 |
| 9 | 168.39 | humidity | 80 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 14 | 169.47 | humidity | 80 | 10 | < th | dose independent | rect. | 21 | 7 |
| 23 | 169.93 | humidity | 80 | 90 | < th | dose independent | rect. | 23 | 4 |
| 39 | 170.43 | humidity | 80 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 40 | 170.44 | humidity | 80 | 10 | < th | dose dependent | rect. | 24 | 4 |
| 42 | 170.46 | humidity | 80 | 270 | < th | dose independent | rect. | 23 | 1 |
| 87 | 171.55 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 4 |
| 95 | 171.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 96 | 171.78 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 97 | 171.81 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 99 | 171.82 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 105 | 171.97 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 117 | 172.09 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 2 |
| 122 | 172.09 | humidity | 80 | 10 | < th | dose dependent | rect. | 24 | 2 |
| 127 | 172.10 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 12 |
| 129 | 172.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 133 | 172.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 134 | 172.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 11 |
| 143 | 172.27 | temperature | 25 | 720 | < th | dose dependent | sin | 22 | NA |
| 152 | 172.38 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 155 | 172.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 165 | 172.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 185 | 172.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 6 |
| 190 | 172.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 17 |
| 243 | 172.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 291 | 172.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 300 | 172.96 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 313 | 172.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 18 |
| 314 | 172.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 20 |
| 327 | 173.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 17 |
| 403 | 173.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 13 |
| 479 | 173.25 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 498 | 173.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 505 | 173.27 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 568 | 173.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 597 | 173.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 674 | 173.53 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 743 | 173.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 2 |
| 884 | 173.92 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 895 | 173.93 | wind | 7 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 924 | 173.99 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 929 | 173.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 930 | 174.00 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 938 | 174.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 969 | 174.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 970 | 174.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |