Os12g0174200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0174200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 209.86 | 0.681 | 6.9 | -2.4 | 2.08 | 4.26 | 0.0766 | 0.183 | 0.0675 | 11.4 | 8.842 | 257 | 11 | 14.7 |
| 209.68 | 0.674 | 6.9 | -2.41 | 2.2 | 4.4 | 0.0257 | -- | 0.0601 | 11.2 | 8.198 | 259 | 11 | 14.7 |
| 209.64 | 0.674 | 6.89 | -2.36 | 2.17 | 4.36 | -- | 0.335 | 0.0737 | 11.2 | 8.428 | 262 | 11 | 14.6 |
| 209.22 | 0.674 | 6.88 | -2.4 | 2.45 | 4.66 | -- | -- | 0.0667 | 10.9 | 6.76 | 271 | 11 | 14.5 |
| 276.12 | 0.774 | 6.94 | -2.3 | -- | 3.6 | -- | 1.44 | 0.0671 | -- | 17.82 | 158 | 10.6 | 15.1 |
| 331.33 | 0.853 | 6.94 | -1.95 | 2.76 | -- | 0.981 | -- | 0.339 | 17.4 | -- | -- | -- | -- |
| 333.71 | 0.855 | 6.93 | -1.95 | 2.76 | -- | -- | -- | 0.343 | 17.4 | -- | -- | -- | -- |
| 272.43 | 0.769 | 6.96 | -2.49 | -- | 3.65 | -- | -- | -0.0299 | -- | 17.66 | 163 | 10.6 | 15.1 |
| 356.08 | 0.879 | 6.83 | -- | 2.98 | 4.88 | -- | -- | 0.316 | 10.9 | 0.4047 | 268 | 11.2 | 14.4 |
| 732.1 | 1.26 | 6.9 | -2.05 | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
| 434.07 | 0.975 | 6.88 | -- | 2.8 | -- | -- | -- | 0.561 | 17.3 | -- | -- | -- | -- |
| 438.31 | 0.975 | 6.89 | -- | -- | 3.37 | -- | -- | 0.312 | -- | 16.29 | 149 | 10.8 | 14.4 |
| 842.46 | 1.35 | 6.85 | -- | -- | -- | -- | -- | 0.502 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 212.35 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 15 |
| 6 | 222.00 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 21 |
| 20 | 227.08 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 21 |
| 25 | 227.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 10 |
| 26 | 228.03 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 19 |
| 129 | 238.06 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 16 |
| 137 | 238.29 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 17 |
| 140 | 238.50 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 18 |
| 157 | 239.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 202 | 240.41 | temperature | 25 | 720 | < th | dose dependent | sin | 18 | NA |
| 221 | 240.88 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 5 |
| 233 | 240.99 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 236 | 241.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 329 | 242.19 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 20 |
| 344 | 242.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 537 | 244.39 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 727 | 246.25 | temperature | 15 | 1440 | > th | dose dependent | sin | 13 | NA |
| 862 | 247.34 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |