Os12g0173400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0173400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.11 | 0.205 | 12.3 | 0.613 | 0.827 | -0.162 | -0.574 | 0.524 | 0.102 | 20.2 | 20.12 | 40 | -- | -- |
| 19.97 | 0.21 | 12.3 | 0.548 | 0.822 | -0.259 | -0.617 | -- | 0.0831 | 20.2 | 19.16 | 112 | -- | -- |
| 20.12 | 0.209 | 12.3 | 0.624 | 0.831 | -0.165 | -- | 0.567 | 0.102 | 20.2 | 20.1 | 38 | -- | -- |
| 21.11 | 0.215 | 12.3 | 0.573 | 0.823 | -0.28 | -- | -- | 0.0863 | 20.1 | 19.16 | 112 | -- | -- |
| 57.51 | 0.355 | 12.3 | 0.657 | -- | -0.249 | -- | 0.595 | 0.111 | -- | 20.3 | 38 | -- | -- |
| 21.91 | 0.219 | 12.3 | 0.467 | 0.839 | -- | -0.696 | -- | 0.046 | 20.4 | -- | -- | -- | -- |
| 23.42 | 0.227 | 12.3 | 0.49 | 0.843 | -- | -- | -- | 0.0464 | 20.3 | -- | -- | -- | -- |
| 57.86 | 0.354 | 12.3 | 0.604 | -- | -0.405 | -- | -- | 0.093 | -- | 19.09 | 2 | -- | -- |
| 29.13 | 0.253 | 12.3 | -- | 0.83 | -0.139 | -- | -- | 0.00704 | 20.3 | 19.16 | 112 | -- | -- |
| 62.89 | 0.371 | 12.3 | 0.485 | -- | -- | -- | -- | 0.0375 | -- | -- | -- | -- | -- |
| 29.74 | 0.255 | 12.3 | -- | 0.841 | -- | -- | -- | -0.00813 | 20.4 | -- | -- | -- | -- |
| 66.78 | 0.382 | 12.3 | -- | -- | -0.261 | -- | -- | 0.0115 | -- | 19.2 | 6 | -- | -- |
| 69.09 | 0.388 | 12.3 | -- | -- | -- | -- | -- | -0.0163 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.25 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 17.65 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 3 | 17.70 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 21 | 3 |
| 10 | 17.84 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 11 | 17.86 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 14 | 17.87 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 19 | 17.88 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 32 | 17.94 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 36 | 17.96 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 44 | 17.96 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 19 | 13 |
| 46 | 17.97 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 62 | 17.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 70 | 17.99 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 14 | 21 |
| 95 | 18.02 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 96 | 18.02 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 101 | 18.03 | temperature | 20.0 | 30 | < th | dose independent | rect. | 15 | 19 |
| 111 | 18.04 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 114 | 18.05 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 18 |
| 115 | 18.05 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 149 | 18.08 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 161 | 18.10 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 162 | 18.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 167 | 18.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 207 | 18.13 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 246 | 18.16 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 24 | 10 |
| 272 | 18.18 | temperature | 20.0 | 10 | < th | dose independent | sin | 13 | NA |
| 311 | 18.20 | humidity | 80.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 344 | 18.22 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 391 | 18.25 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 409 | 18.25 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 437 | 18.27 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 441 | 18.27 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 474 | 18.28 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 513 | 18.30 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 514 | 18.30 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 567 | 18.32 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 568 | 18.32 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 569 | 18.32 | temperature | 20.0 | 10 | < th | dose independent | rect. | 14 | 12 |
| 588 | 18.33 | humidity | 80.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 591 | 18.33 | temperature | 20.0 | 90 | < th | dose independent | rect. | 15 | 12 |
| 595 | 18.33 | temperature | 25.0 | 10 | < th | dose dependent | sin | 14 | NA |
| 614 | 18.34 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 619 | 18.34 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 642 | 18.35 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 644 | 18.35 | temperature | 20.0 | 90 | < th | dose independent | rect. | 13 | 14 |
| 690 | 18.36 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 727 | 18.37 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 859 | 18.40 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 20 |
| 863 | 18.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 890 | 18.41 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 897 | 18.41 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 17 | 16 |