Os12g0171700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0171700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.13 | 0.55 | 8.19 | -0.495 | 1.56 | 1.07 | -0.797 | -1.33 | -0.399 | 11.9 | 26.06 | 1379 | -- | -- |
| 138.23 | 0.548 | 8.18 | -0.215 | 1.55 | 0.951 | -0.773 | -- | -0.398 | 11.9 | 25.75 | 1366 | -- | -- |
| 139.84 | 0.551 | 8.18 | -0.484 | 1.57 | 1.07 | -- | -1.19 | -0.379 | 11.9 | 26.26 | 1366 | -- | -- |
| 140.2 | 0.551 | 8.15 | -0.174 | 1.57 | 0.945 | -- | -- | -0.323 | 11.9 | 25.94 | 1366 | -- | -- |
| 253.45 | 0.746 | 8.25 | -0.63 | -- | 1.95 | -- | -5.49 | -0.471 | -- | 25.8 | 1550 | -- | -- |
| 176.77 | 0.623 | 8.13 | 0.188 | 1.47 | -- | -0.925 | -- | -0.259 | 11.7 | -- | -- | -- | -- |
| 180.48 | 0.629 | 8.13 | 0.15 | 1.47 | -- | -- | -- | -0.263 | 11.7 | -- | -- | -- | -- |
| 263.21 | 0.759 | 8.18 | -0.0903 | -- | 1.54 | -- | -- | -0.343 | -- | 25.7 | 1544 | -- | -- |
| 140.85 | 0.553 | 8.14 | -- | 1.57 | 0.917 | -- | -- | -0.286 | 11.9 | 26.4 | 1357 | -- | -- |
| 316.73 | 0.832 | 8.17 | 0.108 | -- | -- | -- | -- | -0.281 | -- | -- | -- | -- | -- |
| 181.07 | 0.629 | 8.14 | -- | 1.47 | -- | -- | -- | -0.279 | 11.7 | -- | -- | -- | -- |
| 263.42 | 0.758 | 8.18 | -- | -- | 1.52 | -- | -- | -0.333 | -- | 25.7 | 1544 | -- | -- |
| 317.04 | 0.831 | 8.17 | -- | -- | -- | -- | -- | -0.293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.79 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 2 | 136.18 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 4 | 136.78 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 18 | 136.79 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 19 | 136.83 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 30 | 136.90 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 31 | 136.93 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 34 | 136.94 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 36 | 136.95 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 37 | 137.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 49 | 137.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 10 |
| 50 | 137.11 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 12 |
| 52 | 137.14 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 66 | 137.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 7 |
| 72 | 137.65 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 73 | 137.73 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 75 | 137.81 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 77 | 138.04 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 114 | 138.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 22 |
| 117 | 138.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 14 |
| 125 | 138.32 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 144 | 138.36 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 164 | 138.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 177 | 138.42 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 220 | 138.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 13 |
| 224 | 138.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 21 |
| 226 | 138.49 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 232 | 138.49 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 296 | 138.58 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 361 | 138.77 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 489 | 139.43 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 587 | 139.83 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 591 | 139.87 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 595 | 139.88 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 624 | 140.01 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 656 | 140.12 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 739 | 140.41 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 740 | 140.41 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 779 | 140.49 | temperature | 30 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 912 | 140.71 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 914 | 140.71 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 926 | 140.71 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 929 | 140.71 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 965 | 140.83 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 1 |