Os12g0171600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0171600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 183.95 | 0.637 | 5.08 | -0.0531 | 1.18 | 0.936 | -1.04 | 0.0923 | -0.377 | 18.1 | 26.24 | 256 | -- | -- |
| 183.51 | 0.631 | 5.08 | -0.0855 | 1.13 | 0.989 | -1.03 | -- | -0.402 | 17.9 | 26.2 | 301 | -- | -- |
| 185.57 | 0.634 | 5.09 | -0.139 | 1.17 | 0.97 | -- | -0.353 | -0.436 | 17.8 | 26.3 | 314 | -- | -- |
| 186.02 | 0.635 | 5.08 | -0.0742 | 1.13 | 0.977 | -- | -- | -0.401 | 17.8 | 26.24 | 314 | -- | -- |
| 220.4 | 0.691 | 5.14 | -0.528 | -- | 1.71 | -- | -1.04 | -0.712 | -- | 26.2 | 344 | -- | -- |
| 220.52 | 0.696 | 5.03 | 0.205 | 1.91 | -- | -0.645 | -- | -0.0928 | 17.6 | -- | -- | -- | -- |
| 221.54 | 0.697 | 5.03 | 0.208 | 1.9 | -- | -- | -- | -0.0955 | 17.6 | -- | -- | -- | -- |
| 222.34 | 0.694 | 5.11 | -0.293 | -- | 1.67 | -- | -- | -0.635 | -- | 26.25 | 344 | -- | -- |
| 186.16 | 0.635 | 5.08 | -- | 1.15 | 0.96 | -- | -- | -0.389 | 17.8 | 26.25 | 314 | -- | -- |
| 409.86 | 0.946 | 5 | 0.146 | -- | -- | -- | -- | -0.142 | -- | -- | -- | -- | -- |
| 222.68 | 0.698 | 5.03 | -- | 1.9 | -- | -- | -- | -0.119 | 17.6 | -- | -- | -- | -- |
| 224.53 | 0.698 | 5.1 | -- | -- | 1.63 | -- | -- | -0.594 | -- | 26.26 | 339 | -- | -- |
| 410.42 | 0.946 | 5.01 | -- | -- | -- | -- | -- | -0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 181.82 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 17 |
| 18 | 184.18 | temperature | 25 | 270 | > th | dose dependent | sin | 6 | NA |
| 21 | 184.27 | temperature | 25 | 90 | > th | dose dependent | sin | 2 | NA |
| 23 | 184.30 | temperature | 30 | 90 | < th | dose dependent | sin | 22 | NA |
| 27 | 184.61 | temperature | 25 | 270 | > th | dose dependent | rect. | 18 | 21 |
| 41 | 185.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 43 | 185.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 50 | 186.11 | temperature | 20 | 30 | > th | dose dependent | sin | 22 | NA |
| 67 | 186.77 | temperature | 25 | 30 | > th | dose dependent | rect. | 9 | 21 |
| 94 | 187.15 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 111 | 187.50 | temperature | 25 | 270 | > th | dose dependent | rect. | 2 | 12 |
| 207 | 188.55 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 17 |
| 239 | 188.93 | temperature | 10 | 30 | > th | dose dependent | sin | 22 | NA |
| 302 | 189.36 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 18 |
| 406 | 190.14 | temperature | 25 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 413 | 190.19 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 448 | 190.38 | temperature | 25 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 662 | 191.73 | temperature | 25 | 90 | < th | dose independent | sin | 21 | NA |
| 693 | 191.84 | temperature | 25 | 90 | > th | dose independent | sin | 21 | NA |
| 815 | 192.51 | temperature | 25 | 270 | > th | dose independent | sin | 23 | NA |
| 861 | 192.76 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 5 |
| 862 | 192.76 | temperature | 25 | 10 | > th | dose independent | rect. | 9 | 19 |
| 877 | 192.84 | temperature | 25 | 10 | > th | dose independent | rect. | 9 | 17 |
| 981 | 193.30 | temperature | 25 | 10 | > th | dose independent | rect. | 9 | 14 |
| 988 | 193.33 | temperature | 25 | 10 | > th | dose independent | rect. | 9 | 10 |
| 989 | 193.33 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 11 |