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Os12g0169400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : CBS domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0238) R2 : 0.925
β1 : -1.09 (0.0867) R2dD : 0.0269 R2D : 0.0199
β2 : 4.02 (0.0626) R2dC : 0.767 R2C : 0.859
β3 : -1.73 (0.14) R2dE : 0.03 R2E : 0.135
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.336 (0.0523) R2dN8 : 0.00959 R2N8 : 0.00296
σ : 0.443
deviance : 90.34
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_____
C
peak time of C : 8.9
E
wheather : atmosphere
threshold : 1004
memory length : 32
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 16
open length of G : 3.62

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
87.15 0.439 10.9 -1.12 4.03 -1.77 1.01 0.262 -0.325 8.9 1005 40 16 3.5
87.17 0.435 10.9 -1.13 4.03 -1.78 0.984 -- -0.326 8.9 1005 39 16 3.5
90.14 0.442 10.9 -1.1 4.03 -1.78 -- -0.757 -0.339 8.91 1004 29 16 3.68
90.34 0.443 10.9 -1.09 4.02 -1.73 -- -- -0.336 8.9 1004 32 16 3.62
115.89 0.501 11 -1.07 -- -4.21 -- -0.623 -0.341 -- 954.1 469 11 11.7
115.22 0.503 11 -1.15 4.31 -- 0.889 -- -0.505 8.71 -- -- -- --
117.84 0.508 11 -1.12 4.31 -- -- -- -0.505 8.7 -- -- -- --
117.86 0.506 11 -1.1 -- -4.22 -- -- -0.334 -- 953.3 464 11.1 11.7
121.67 0.514 10.9 -- 3.97 -1.64 -- -- -0.261 8.95 1004 41 15.9 3.65
1167.68 1.6 11.1 -1.11 -- -- -- -- -0.469 -- -- -- -- --
151.01 0.575 10.9 -- 4.31 -- -- -- -0.38 8.72 -- -- -- --
147.41 0.565 11 -- -- -4.23 -- -- -0.327 -- 908.8 478 11 11.4
1200.36 1.62 11 -- -- -- -- -- -0.346 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 88.36 atmosphere 1005.0 30 > th dose dependent rect. 16 3
6 92.33 atmosphere 1005.0 270 > th dose independent rect. 15 2
10 93.34 atmosphere 1005.0 270 > th dose independent rect. 14 5
11 93.38 temperature 25.0 270 < th dose independent rect. 23 9
14 93.56 temperature 30.0 30 < th dose independent rect. 16 3
20 93.77 atmosphere 1005.0 270 > th dose dependent rect. 16 1
28 94.49 temperature 30.0 90 < th dose dependent rect. 1 9
45 95.23 humidity 60.0 270 > th dose independent rect. 15 2
47 95.33 radiation 10.0 270 > th dose independent rect. 16 1
63 95.76 radiation 10.0 43200 < th dose dependent rect. 20 6
66 95.87 temperature 30.0 270 < th dose independent rect. 15 2
69 96.02 humidity 60.0 90 > th dose independent rect. 15 4
82 96.35 wind 5.0 270 > th dose independent rect. 15 2
112 96.78 temperature 25.0 30 > th dose independent rect. 16 3
115 96.85 radiation 10.0 43200 < th dose dependent rect. 20 8
116 96.87 temperature 25.0 270 > th dose independent sin 8 NA
117 96.90 humidity 50.0 270 > th dose independent rect. 13 6
119 96.97 temperature 30.0 30 < th dose dependent rect. 3 7
144 97.41 temperature 25.0 270 > th dose independent rect. 20 17
147 97.45 temperature 10.0 270 > th dose dependent rect. 19 18
149 97.49 temperature 25.0 30 < th dose independent rect. 3 7
165 97.71 temperature 30.0 10 < th dose independent rect. 18 1
173 97.79 humidity 70.0 10 > th dose independent rect. 18 1
177 97.83 temperature 25.0 90 > th dose independent rect. 23 16
196 98.06 humidity 70.0 10 > th dose dependent rect. 18 1
202 98.14 temperature 10.0 10 > th dose dependent rect. 21 19
206 98.20 wind 1.0 270 > th dose dependent rect. 15 2
216 98.28 temperature 30.0 30 < th dose dependent rect. 18 1
223 98.35 radiation 10.0 43200 < th dose dependent rect. 22 4
233 98.41 atmosphere 995.0 270 > th dose independent rect. 13 6
246 98.61 temperature 10.0 90 > th dose dependent rect. 21 18
264 98.71 atmosphere 1005.0 10 > th dose dependent rect. 18 1
276 98.82 radiation 20.0 43200 < th dose dependent rect. 22 6
299 98.99 temperature 10.0 90 > th dose dependent rect. 19 20
301 99.01 temperature 25.0 270 > th dose independent rect. 16 1
320 99.14 atmosphere 995.0 270 > th dose independent rect. 15 2
334 99.24 atmosphere 995.0 90 > th dose independent rect. 1 18
349 99.34 humidity 90.0 270 < th dose independent rect. 15 2
354 99.38 temperature 25.0 270 < th dose independent sin 8 NA
355 99.38 temperature 10.0 10 > th dose dependent rect. 6 10
356 99.39 radiation 10.0 270 > th dose dependent rect. 16 1
358 99.40 humidity 50.0 30 > th dose dependent rect. 16 3
364 99.46 temperature 25.0 30 < th dose independent rect. 3 5
366 99.46 humidity 50.0 270 > th dose independent rect. 24 19
377 99.53 radiation 40.0 270 < th dose independent rect. 19 19
386 99.59 temperature 20.0 30 > th dose dependent rect. 16 3
407 99.64 temperature 20.0 270 > th dose independent rect. 4 9
423 99.74 atmosphere 995.0 30 > th dose independent rect. 16 3
434 99.84 temperature 20.0 270 > th dose independent rect. 13 6
435 99.85 wind 3.0 10 > th dose independent rect. 16 3
447 99.90 temperature 30.0 30 < th dose independent rect. 16 14
467 99.98 radiation 40.0 270 < th dose independent rect. 14 3
482 100.04 temperature 25.0 270 < th dose independent rect. 1 1
485 100.05 wind 9.0 270 < th dose independent rect. 13 6
488 100.06 atmosphere 995.0 10 > th dose independent rect. 16 14
493 100.09 temperature 10.0 270 > th dose dependent rect. 19 6
499 100.12 wind 9.0 270 < th dose independent rect. 19 18
500 100.12 atmosphere 1015.0 90 < th dose dependent rect. 19 6
503 100.14 radiation 1.0 14400 < th dose dependent rect. 19 1
504 100.16 temperature 10.0 270 > th dose independent rect. 13 6
506 100.16 atmosphere 1010.0 270 < th dose independent rect. 13 6
509 100.16 temperature 10.0 270 > th dose independent rect. 19 18
510 100.16 atmosphere 995.0 270 > th dose independent rect. 19 18
511 100.16 temperature 25.0 30 > th dose dependent rect. 16 7
515 100.18 wind 1.0 270 > th dose independent rect. 19 6
532 100.22 wind 1.0 270 > th dose dependent rect. 13 6
534 100.23 wind 9.0 90 < th dose independent rect. 1 18
535 100.24 wind 1.0 270 > th dose independent rect. 13 6
539 100.26 temperature 10.0 90 > th dose independent rect. 19 6
540 100.26 temperature 30.0 90 < th dose independent rect. 19 6
541 100.26 humidity 50.0 90 > th dose independent rect. 19 6
543 100.26 atmosphere 995.0 90 > th dose independent rect. 19 6
544 100.26 radiation 1.0 90 < th dose independent rect. 19 6
550 100.26 temperature 10.0 90 > th dose independent rect. 1 18
551 100.26 atmosphere 1015.0 90 < th dose independent rect. 1 18
552 100.26 radiation 1.0 90 < th dose dependent rect. 19 6
558 100.27 wind 9.0 90 < th dose independent rect. 19 6
559 100.27 atmosphere 995.0 30 > th dose independent rect. 3 16
562 100.28 wind 1.0 270 > th dose independent rect. 15 2
564 100.29 wind 9.0 270 < th dose independent rect. 15 2
574 100.33 humidity 80.0 30 < th dose independent rect. 16 3
575 100.33 precipitation 0.1 30 < th dose independent rect. 19 21
576 100.33 precipitation 0.1 30 < th dose dependent rect. 19 21
581 100.35 temperature 25.0 10 > th dose independent rect. 16 5
590 100.37 atmosphere 1015.0 270 < th dose dependent rect. 19 4
593 100.38 atmosphere 1010.0 270 < th dose independent rect. 19 5
594 100.38 humidity 90.0 270 < th dose independent rect. 13 6
603 100.44 temperature 10.0 270 > th dose independent rect. 15 2
605 100.44 atmosphere 1010.0 270 < th dose independent rect. 15 2
608 100.44 temperature 10.0 270 > th dose independent rect. 17 22
616 100.46 temperature 20.0 10 > th dose dependent rect. 23 17
620 100.49 radiation 10.0 10 < th dose independent rect. 16 3
621 100.49 radiation 1.0 30 > th dose independent rect. 6 10
623 100.50 precipitation 0.1 90 < th dose independent rect. 19 6
624 100.50 precipitation 0.1 270 < th dose independent rect. 19 18
625 100.50 precipitation 0.1 90 < th dose dependent rect. 19 6
627 100.50 precipitation 0.1 270 < th dose dependent rect. 19 18
634 100.54 temperature 15.0 10 > th dose independent rect. 16 14
640 100.56 wind 9.0 30 < th dose independent rect. 16 3
645 100.57 wind 3.0 10 > th dose independent rect. 16 5
648 100.57 humidity 60.0 30 > th dose independent rect. 16 14
654 100.61 precipitation 0.1 270 < th dose independent rect. 15 2
658 100.61 precipitation 0.1 270 < th dose independent rect. 17 22
659 100.61 precipitation 0.1 270 < th dose dependent rect. 15 2
661 100.61 precipitation 0.1 270 < th dose dependent rect. 17 22
666 100.63 atmosphere 995.0 270 > th dose independent rect. 14 14
670 100.64 wind 9.0 270 < th dose independent rect. 17 22
677 100.67 temperature 10.0 1440 > th dose independent rect. 17 3
680 100.67 radiation 30.0 1440 < th dose independent rect. 17 3
687 100.67 precipitation 0.1 270 < th dose independent rect. 13 6
689 100.67 temperature 10.0 1440 > th dose independent rect. 20 21
693 100.67 precipitation 0.1 270 < th dose dependent rect. 13 6
695 100.68 temperature 10.0 1440 > th dose independent rect. 20 6
698 100.68 temperature 30.0 1440 < th dose independent rect. 20 6
702 100.68 humidity 50.0 1440 > th dose independent rect. 20 6
708 100.68 atmosphere 995.0 1440 > th dose independent rect. 20 6
709 100.68 radiation 1.0 1440 < th dose independent rect. 20 6
729 100.68 temperature 10.0 1440 > th dose independent rect. 2 18
732 100.68 radiation 10.0 1440 < th dose dependent rect. 20 6
738 100.70 wind 1.0 10 > th dose dependent rect. 16 5
739 100.71 temperature 10.0 30 > th dose independent rect. 16 3
742 100.71 atmosphere 1010.0 30 < th dose independent rect. 16 3
744 100.71 radiation 30.0 30 < th dose independent rect. 16 3
746 100.71 temperature 10.0 30 > th dose independent rect. 19 21
761 100.75 atmosphere 1015.0 270 < th dose dependent rect. 21 1
768 100.79 precipitation 0.1 30 < th dose independent rect. 16 3
769 100.79 atmosphere 995.0 10 > th dose independent rect. 16 5
771 100.79 wind 9.0 30 < th dose independent rect. 19 21
772 100.79 precipitation 0.1 30 < th dose dependent rect. 16 3
794 100.82 temperature 20.0 10 > th dose independent rect. 6 10
810 100.86 radiation 10.0 30 < th dose dependent rect. 1 18
833 100.89 temperature 30.0 10 < th dose dependent rect. 1 18
835 100.90 radiation 1.0 30 < th dose dependent rect. 18 1
841 100.92 atmosphere 1010.0 30 < th dose independent rect. 21 6
848 100.92 precipitation 0.1 30 < th dose independent rect. 19 23
850 100.92 precipitation 0.1 30 < th dose dependent rect. 19 23
854 100.93 temperature 10.0 1440 > th dose independent rect. 2 9
857 100.93 atmosphere 995.0 1440 > th dose independent rect. 2 9
858 100.93 temperature 10.0 1440 > th dose independent rect. 11 15
890 100.96 temperature 10.0 30 > th dose independent rect. 1 9
892 100.96 humidity 50.0 30 > th dose independent rect. 1 9
893 100.96 atmosphere 995.0 30 > th dose independent rect. 1 9
894 100.96 atmosphere 1015.0 30 < th dose independent rect. 1 9
895 100.96 temperature 10.0 30 > th dose independent rect. 10 15
897 100.96 atmosphere 1015.0 90 < th dose dependent rect. 21 4
898 100.96 temperature 10.0 270 > th dose dependent rect. 4 9
903 100.97 wind 9.0 30 < th dose independent rect. 1 9
915 101.00 humidity 50.0 270 > th dose independent rect. 19 18
921 101.02 temperature 30.0 90 < th dose independent rect. 1 18
923 101.03 radiation 40.0 270 < th dose independent rect. 14 14
939 101.06 wind 9.0 30 < th dose independent rect. 10 15
940 101.06 atmosphere 995.0 30 > th dose independent rect. 19 21
943 101.07 precipitation 0.1 10 < th dose independent rect. 6 10
946 101.07 precipitation 0.1 10 < th dose dependent rect. 6 10
972 101.12 radiation 10.0 30 < th dose dependent rect. 3 16
979 101.14 temperature 10.0 10 > th dose independent rect. 6 10
981 101.14 atmosphere 1015.0 10 < th dose independent rect. 6 10
983 101.14 radiation 30.0 10 < th dose independent rect. 16 14
994 101.15 temperature 10.0 30 > th dose dependent rect. 21 6
997 101.16 wind 1.0 10 > th dose independent rect. 6 10