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Os12g0168900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.014) R2 : 6.04e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00488 (0.0294) R2dN8 : 7.8e-05 R2N8 : 6.04e-05
σ : 0.263
deviance : 31.75
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.36 0.172 13.9 -0.412 0.431 -0.447 0.24 -0.492 0.0307 7.6 62.05 4496 -- --
13.7 0.172 13.9 -0.394 0.426 -0.465 0.242 -- 0.0452 7.58 62.18 4495 -- --
13.51 0.171 13.9 -0.407 0.433 -0.446 -- -0.504 0.0276 7.55 62.47 4515 -- --
13.85 0.173 13.9 -0.386 0.43 -0.469 -- -- 0.0439 7.49 62.17 4495 -- --
23.19 0.224 13.9 -0.402 -- -0.477 -- -0.349 0.0495 -- 62.01 4364 -- --
17.31 0.195 13.9 -0.399 0.438 -- 0.208 -- -0.0541 7.67 -- -- -- --
17.44 0.196 13.9 -0.394 0.439 -- -- -- -0.0544 7.64 -- -- -- --
23.36 0.225 13.9 -0.384 -- -0.496 -- -- 0.0696 -- 62.48 4354 -- --
17.26 0.194 13.9 -- 0.471 -0.556 -- -- -0.016 7.67 65 6927 -- --
27.78 0.246 13.9 -0.388 -- -- -- -- -0.0479 -- -- -- -- --
21.52 0.217 13.9 -- 0.435 -- -- -- -0.0106 7.71 -- -- -- --
26.99 0.242 13.9 -- -- -0.569 -- -- -0.00416 -- 65.39 7156 -- --
31.75 0.263 13.9 -- -- -- -- -- -0.00488 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.89 wind 1.0 43200 < th dose dependent rect. 8 5
2 13.07 wind 1.0 43200 < th dose dependent rect. 11 2
3 13.10 wind 9.0 43200 > th dose dependent rect. 12 2
9 13.37 wind 1.0 43200 < th dose independent rect. 8 5
10 13.38 precipitation 0.1 14400 < th dose independent rect. 16 2
11 13.38 precipitation 0.1 14400 < th dose dependent rect. 16 2
12 13.39 precipitation 0.1 14400 > th dose independent rect. 16 2
13 13.40 wind 9.0 43200 < th dose independent rect. 12 2
19 13.43 wind 9.0 43200 > th dose independent rect. 12 2
22 13.43 precipitation 0.1 14400 > th dose dependent rect. 16 2
24 13.44 precipitation 0.1 14400 > th dose independent rect. 11 7
25 13.44 precipitation 0.1 14400 < th dose independent rect. 11 7
26 13.44 wind 1.0 43200 > th dose independent rect. 5 8
28 13.44 precipitation 0.1 14400 < th dose dependent rect. 11 7
54 13.49 precipitation 0.1 14400 > th dose dependent rect. 13 6
56 13.49 precipitation 0.1 14400 > th dose dependent rect. 11 8
80 13.56 wind 3.0 43200 < th dose dependent rect. 1 1
81 13.57 wind 1.0 43200 > th dose independent rect. 8 5
82 13.57 humidity 80.0 1440 < th dose independent rect. 7 7
86 13.57 humidity 70.0 1440 > th dose dependent rect. 11 1
89 13.57 precipitation 0.1 14400 > th dose dependent rect. 11 11
91 13.57 wind 3.0 43200 < th dose dependent rect. 20 18
98 13.58 precipitation 0.1 14400 > th dose dependent rect. 13 9
101 13.58 wind 3.0 43200 < th dose dependent rect. 23 17
108 13.59 wind 3.0 43200 < th dose dependent rect. 5 9
119 13.60 precipitation 0.1 14400 > th dose dependent sin 21 NA
123 13.60 wind 3.0 43200 < th dose dependent rect. 4 12
139 13.62 wind 1.0 43200 < th dose dependent rect. 5 1
146 13.63 precipitation 0.1 14400 < th dose independent rect. 14 8
153 13.63 precipitation 0.1 14400 < th dose dependent rect. 14 8
160 13.64 humidity 80.0 1440 > th dose independent rect. 7 7
165 13.64 wind 3.0 43200 < th dose independent rect. 1 16
167 13.64 humidity 90.0 14400 < th dose dependent rect. 3 1
187 13.65 wind 3.0 43200 > th dose independent rect. 1 17
195 13.65 humidity 70.0 4320 < th dose dependent rect. 15 20
197 13.66 wind 1.0 43200 < th dose independent rect. 24 2
207 13.66 wind 3.0 43200 < th dose independent rect. 23 19
223 13.67 wind 3.0 43200 > th dose independent rect. 23 19
224 13.67 humidity 70.0 4320 < th dose dependent sin 12 NA
227 13.67 humidity 70.0 4320 < th dose dependent rect. 15 5
233 13.67 humidity 70.0 4320 < th dose dependent rect. 15 17
247 13.68 wind 3.0 43200 < th dose independent rect. 10 22
248 13.68 temperature 30.0 43200 > th dose dependent rect. 8 1
289 13.69 humidity 80.0 1440 < th dose independent rect. 7 5
298 13.69 wind 3.0 43200 > th dose independent rect. 11 21
301 13.69 wind 3.0 43200 < th dose dependent sin 2 NA
328 13.70 humidity 60.0 14400 < th dose independent rect. 16 18
344 13.71 precipitation 0.1 14400 > th dose independent sin 21 NA
345 13.71 precipitation 0.1 14400 < th dose independent sin 21 NA
347 13.71 wind 1.0 43200 > th dose independent rect. 24 2
350 13.71 wind 3.0 43200 > th dose independent rect. 15 17
354 13.71 humidity 60.0 4320 > th dose independent rect. 13 22
356 13.71 precipitation 0.1 14400 < th dose dependent sin 21 NA
372 13.72 temperature 30.0 43200 > th dose independent rect. 8 1
381 13.72 wind 1.0 43200 < th dose independent rect. 5 8
399 13.72 wind 3.0 43200 < th dose independent rect. 14 18
430 13.73 wind 3.0 43200 < th dose independent rect. 15 16
438 13.73 wind 3.0 43200 < th dose independent rect. 20 22
467 13.74 wind 3.0 43200 < th dose independent rect. 18 22
473 13.74 humidity 70.0 1440 > th dose dependent rect. 7 7
495 13.75 temperature 30.0 43200 < th dose independent rect. 8 1
498 13.75 temperature 30.0 43200 < th dose independent rect. 2 7
500 13.75 wind 3.0 43200 < th dose independent rect. 5 11
502 13.75 wind 3.0 43200 > th dose independent rect. 17 14
530 13.76 temperature 30.0 43200 < th dose independent rect. 19 14
541 13.76 wind 3.0 43200 > th dose independent rect. 20 23
551 13.76 wind 3.0 43200 < th dose dependent rect. 20 11
563 13.77 temperature 30.0 43200 < th dose independent rect. 22 11
574 13.77 wind 3.0 43200 > th dose independent rect. 17 23
585 13.77 wind 5.0 43200 < th dose dependent rect. 11 21
588 13.78 humidity 80.0 1440 > th dose independent rect. 7 5
603 13.78 wind 3.0 43200 < th dose independent rect. 17 14
606 13.78 humidity 60.0 14400 > th dose independent rect. 16 18
638 13.79 wind 3.0 43200 < th dose independent no NA NA
643 13.79 humidity 60.0 4320 > th dose independent rect. 13 6
653 13.79 wind 3.0 43200 > th dose independent rect. 5 11
679 13.79 humidity 60.0 4320 > th dose independent rect. 17 22
699 13.80 wind 3.0 43200 > th dose independent no NA NA
700 13.80 humidity 60.0 4320 > th dose independent sin 13 NA
752 13.81 humidity 80.0 1440 < th dose independent rect. 11 1
774 13.81 humidity 70.0 4320 < th dose dependent rect. 9 10
790 13.81 wind 5.0 43200 < th dose dependent rect. 15 16
844 13.82 wind 3.0 14400 < th dose dependent rect. 24 5
855 13.82 wind 3.0 43200 < th dose dependent rect. 1 21
857 13.82 humidity 80.0 4320 < th dose dependent rect. 22 21
868 13.83 wind 3.0 43200 < th dose independent sin 2 NA
895 13.83 humidity 70.0 4320 < th dose dependent no NA NA
999 13.84 wind 7.0 43200 > th dose independent rect. 15 1
1000 13.84 wind 1.0 43200 < th dose independent rect. 5 2