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Os12g0168400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to GFA2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0211) R2 : 0.578
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.38 (0.0553) R2dC : 0.578 R2C : 0.572
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.103 (0.0444) R2dN8 : 0.0064 R2N8 : -0.000349
σ : 0.398
deviance : 72.52
__
_____
C
peak time of C : 18.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.12 0.358 10.3 0.419 1.35 0.539 -0.177 0.0975 0.11 19.4 21 123 -- --
58.15 0.355 10.3 0.42 1.35 0.539 -0.2 -- 0.109 19.4 21 122 -- --
58.2 0.355 10.3 0.419 1.35 0.538 -- 0.118 0.112 19.4 21.01 122 -- --
58.26 0.355 10.3 0.423 1.35 0.542 -- -- 0.109 19.4 21 122 -- --
87.1 0.435 10.4 0.568 -- 1.24 -- -1.92 0.0113 -- 0.1208 746 -- --
66.14 0.381 10.3 0.482 1.39 -- -0.255 -- 0.158 18.4 -- -- -- --
66.3 0.381 10.3 0.486 1.39 -- -- -- 0.157 18.4 -- -- -- --
72.42 0.396 10.3 0.566 -- 1.69 -- -- 0.0753 -- 1.074 778 -- --
62.88 0.369 10.3 -- 1.36 0.572 -- -- 0.0927 19.4 20.27 122 -- --
166.02 0.602 10.3 0.449 -- -- -- -- 0.127 -- -- -- -- --
72.52 0.398 10.3 -- 1.38 -- -- -- 0.103 18.4 -- -- -- --
73.35 0.399 10.3 -- -- 1.74 -- -- 0.0605 -- 0.05 768 -- --
171.35 0.611 10.3 -- -- -- -- -- 0.0775 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.75 wind 5.0 270 < th dose independent rect. 3 4
2 48.28 wind 7.0 270 < th dose independent rect. 7 20
4 48.36 precipitation 0.1 270 < th dose independent rect. 3 4
5 48.36 precipitation 0.1 270 < th dose dependent rect. 3 4
6 48.48 temperature 10.0 10 > th dose dependent rect. 9 20
7 48.50 wind 5.0 270 < th dose independent rect. 4 2
8 48.59 radiation 1.0 90 > th dose independent rect. 18 14
10 48.76 wind 9.0 270 < th dose dependent rect. 3 4
11 48.86 radiation 1.0 30 > th dose independent rect. 5 4
22 48.87 wind 9.0 270 < th dose independent rect. 6 22
23 48.88 wind 9.0 10 < th dose independent rect. 9 20
24 48.97 wind 5.0 10 < th dose independent rect. 5 4
27 49.01 temperature 10.0 270 > th dose independent rect. 3 4
29 49.01 temperature 30.0 270 < th dose independent rect. 3 4
30 49.01 humidity 50.0 270 > th dose independent rect. 3 4
32 49.01 atmosphere 995.0 270 > th dose independent rect. 3 4
33 49.01 atmosphere 1015.0 270 < th dose independent rect. 3 4
34 49.01 radiation 30.0 270 < th dose independent rect. 3 4
36 49.01 temperature 10.0 270 > th dose independent rect. 7 20
49 49.09 temperature 10.0 10 > th dose dependent rect. 5 4
51 49.11 wind 9.0 270 < th dose dependent rect. 4 2
52 49.12 precipitation 0.1 270 < th dose independent rect. 7 20
53 49.12 precipitation 0.1 270 < th dose dependent rect. 7 20
66 49.17 radiation 40.0 270 < th dose dependent rect. 3 4
70 49.21 temperature 10.0 270 > th dose dependent rect. 7 7
71 49.24 wind 9.0 10 < th dose dependent rect. 5 4
75 49.35 precipitation 0.1 10 < th dose independent rect. 5 4
76 49.35 precipitation 0.1 10 < th dose dependent rect. 5 4
77 49.37 temperature 10.0 90 > th dose dependent rect. 8 20
78 49.40 precipitation 0.1 270 < th dose independent rect. 4 2
79 49.40 wind 9.0 90 < th dose independent rect. 9 19
80 49.40 precipitation 0.1 270 < th dose dependent rect. 4 2
86 49.47 temperature 10.0 10 > th dose independent rect. 5 4
88 49.47 temperature 30.0 10 < th dose independent rect. 5 4
89 49.47 humidity 50.0 10 > th dose independent rect. 5 4
91 49.47 atmosphere 995.0 10 > th dose independent rect. 5 4
92 49.47 atmosphere 1015.0 10 < th dose independent rect. 5 4
94 49.47 temperature 10.0 10 > th dose independent rect. 9 20
110 49.62 temperature 15.0 10 > th dose dependent rect. 9 6
116 49.74 temperature 10.0 270 > th dose independent rect. 4 2
118 49.74 temperature 30.0 270 < th dose independent rect. 4 2
119 49.74 humidity 50.0 270 > th dose independent rect. 4 2
122 49.74 atmosphere 995.0 270 > th dose independent rect. 4 2
123 49.74 atmosphere 1015.0 270 < th dose independent rect. 4 2
124 49.74 radiation 20.0 270 < th dose independent rect. 4 2
127 49.74 temperature 10.0 270 > th dose independent rect. 6 22
137 49.87 temperature 10.0 90 > th dose dependent rect. 4 4
146 49.95 radiation 40.0 270 < th dose dependent rect. 4 2
154 50.02 atmosphere 995.0 10 > th dose independent rect. 9 20
157 50.04 radiation 40.0 10 < th dose independent rect. 5 4
164 50.04 temperature 10.0 90 > th dose independent rect. 9 19
175 50.16 precipitation 0.1 270 < th dose independent rect. 2 6
178 50.16 precipitation 0.1 270 < th dose dependent rect. 2 6
180 50.19 temperature 10.0 270 > th dose dependent rect. 4 2
215 50.29 temperature 15.0 270 > th dose dependent rect. 8 4
217 50.31 precipitation 0.1 10 < th dose independent rect. 9 20
218 50.31 precipitation 0.1 10 < th dose dependent rect. 9 20
221 50.34 precipitation 0.1 90 < th dose independent rect. 9 19
222 50.34 precipitation 0.1 90 < th dose dependent rect. 9 19
244 50.39 atmosphere 995.0 270 > th dose independent rect. 7 20
259 50.41 atmosphere 1000.0 10 > th dose dependent rect. 5 4
273 50.43 humidity 50.0 270 > th dose dependent rect. 3 4
313 50.71 atmosphere 1000.0 270 > th dose dependent rect. 4 2
314 50.71 wind 9.0 270 < th dose dependent rect. 7 20
318 50.74 temperature 10.0 270 > th dose independent rect. 2 6
320 50.74 temperature 30.0 270 < th dose independent rect. 2 6
321 50.74 humidity 50.0 270 > th dose independent rect. 2 6
323 50.74 atmosphere 995.0 270 > th dose independent rect. 2 6
324 50.74 atmosphere 1015.0 270 < th dose independent rect. 2 6
332 50.75 atmosphere 995.0 90 > th dose independent rect. 9 19
364 50.81 humidity 50.0 270 > th dose dependent rect. 4 2
380 50.90 radiation 1.0 90 < th dose dependent sin 11 NA
381 50.91 atmosphere 1000.0 90 > th dose dependent rect. 4 4
421 51.00 wind 7.0 270 < th dose independent rect. 7 8
438 51.05 temperature 15.0 270 > th dose dependent rect. 9 1
465 51.19 temperature 10.0 1440 > th dose independent rect. 5 5
468 51.19 atmosphere 995.0 1440 > th dose independent rect. 5 5
469 51.19 atmosphere 1015.0 1440 < th dose independent rect. 5 5
470 51.19 temperature 10.0 1440 > th dose independent rect. 10 19
475 51.21 radiation 1.0 90 < th dose independent sin 11 NA
477 51.22 radiation 1.0 90 > th dose independent sin 11 NA
539 51.35 radiation 1.0 270 > th dose independent rect. 7 8
563 51.40 humidity 90.0 10 < th dose independent rect. 5 4
568 51.42 wind 9.0 90 < th dose dependent rect. 9 19
574 51.45 wind 1.0 270 > th dose independent rect. 3 4
582 51.47 temperature 15.0 270 > th dose independent rect. 7 8
584 51.48 radiation 10.0 10 < th dose dependent sin 11 NA
605 51.54 atmosphere 1015.0 10 < th dose independent rect. 9 20
611 51.56 precipitation 0.1 270 < th dose independent rect. 3 15
612 51.56 precipitation 0.1 270 < th dose dependent rect. 3 15
615 51.57 radiation 1.0 90 > th dose dependent rect. 18 13
617 51.59 wind 7.0 270 < th dose independent rect. 18 9
626 51.61 precipitation 0.1 270 < th dose independent rect. 15 16
628 51.61 precipitation 0.1 270 < th dose dependent rect. 15 16
639 51.67 radiation 40.0 270 < th dose independent rect. 13 18
642 51.69 radiation 10.0 270 < th dose dependent rect. 18 9
645 51.70 precipitation 0.1 270 < th dose independent rect. 7 8
646 51.70 precipitation 0.1 270 < th dose dependent rect. 7 8
647 51.71 radiation 10.0 270 < th dose independent rect. 18 9
658 51.76 radiation 1.0 90 > th dose dependent rect. 4 3
677 51.79 humidity 50.0 270 > th dose independent rect. 7 20
680 51.80 temperature 10.0 270 > th dose independent rect. 18 9
681 51.80 humidity 50.0 270 > th dose independent rect. 18 9
685 51.80 temperature 10.0 270 > th dose independent rect. 3 15
686 51.80 atmosphere 1015.0 270 < th dose independent rect. 3 15
689 51.80 wind 9.0 270 < th dose dependent rect. 7 7
693 51.82 atmosphere 995.0 270 > th dose independent rect. 18 9
703 51.86 radiation 40.0 270 < th dose independent rect. 11 21
714 51.90 atmosphere 1005.0 10 > th dose independent rect. 5 4
733 51.94 atmosphere 995.0 270 > th dose independent rect. 7 8
734 51.94 atmosphere 1015.0 270 < th dose independent rect. 7 8
735 51.94 temperature 10.0 270 > th dose independent rect. 15 16
751 52.01 precipitation 0.1 270 < th dose independent rect. 18 9
755 52.01 precipitation 0.1 270 < th dose dependent rect. 18 9
756 52.01 radiation 10.0 270 < th dose dependent rect. 3 10
757 52.02 wind 1.0 90 > th dose independent rect. 5 3
767 52.04 temperature 30.0 270 < th dose independent rect. 19 8
857 52.31 wind 1.0 90 > th dose independent rect. 8 21
858 52.31 humidity 50.0 270 > th dose dependent rect. 19 8
860 52.32 radiation 40.0 270 < th dose dependent rect. 3 15
862 52.33 wind 9.0 270 < th dose independent rect. 15 16
864 52.34 radiation 1.0 30 < th dose independent rect. 20 10
878 52.38 humidity 70.0 90 > th dose independent rect. 4 7
882 52.39 atmosphere 1005.0 270 > th dose independent rect. 4 2
884 52.40 humidity 50.0 10 > th dose independent rect. 9 20
888 52.40 radiation 20.0 270 < th dose dependent rect. 3 15
892 52.41 radiation 1.0 30 < th dose dependent rect. 20 10
898 52.42 humidity 90.0 90 < th dose independent rect. 8 7
912 52.44 radiation 40.0 90 < th dose independent rect. 4 16
938 52.50 wind 9.0 10 < th dose dependent rect. 9 20
943 52.53 humidity 90.0 270 < th dose independent rect. 8 5
972 52.59 atmosphere 1005.0 270 > th dose independent rect. 3 4