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Os12g0168200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ssu72-like protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.22 (0.0235) R2 : 0.292
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.79 (0.0586) R2dC : 0.282 R2C : 0.282
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.108 (0.0495) R2dN8 : 0.00948 R2N8 : 0.00961
σ : 0.443
deviance : 89.88
__
_____
C
peak time of C : 15
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.79 0.42 7.18 0.406 0.744 0.502 -0.0668 -0.912 0.0711 15.3 19.83 1364 -- --
81.33 0.42 7.19 0.346 0.711 0.514 -0.14 -- 0.0537 15.5 30 1320 -- --
79.29 0.415 7.18 0.407 0.743 0.557 -- -1.07 0.0681 15.7 20 1292 -- --
81.28 0.42 7.19 0.317 0.722 0.506 -- -- 0.0405 15.6 29.94 1304 -- --
101.66 0.472 7.22 0.215 -- -0.522 -- 0.342 -0.0935 -- 20 1302 -- --
88.39 0.441 7.21 0.236 0.794 -- -0.138 -- -0.0809 15 -- -- -- --
88.45 0.44 7.21 0.233 0.794 -- -- -- -0.0817 15 -- -- -- --
102.04 0.473 7.22 0.194 -- -0.543 -- -- -0.0968 -- 23.73 1302 -- --
83.61 0.426 7.2 -- 0.741 0.475 -- -- -0.0195 15.6 20.01 1308 -- --
124.64 0.522 7.22 0.199 -- -- -- -- -0.102 -- -- -- -- --
89.88 0.443 7.22 -- 0.79 -- -- -- -0.108 15 -- -- -- --
103.03 0.474 7.22 -- -- -0.544 -- -- -0.118 -- 23.73 1302 -- --
125.69 0.523 7.22 -- -- -- -- -- -0.124 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 74.53 wind 5.0 270 < th dose independent rect. 23 9
2 75.11 temperature 15.0 270 > th dose independent rect. 23 9
3 75.14 precipitation 0.1 270 < th dose independent rect. 23 9
4 75.14 precipitation 0.1 270 < th dose dependent rect. 23 9
7 75.29 precipitation 0.1 10 < th dose independent rect. 2 7
8 75.29 precipitation 0.1 10 < th dose dependent rect. 2 7
9 75.38 temperature 15.0 270 > th dose independent rect. 12 19
10 75.41 temperature 15.0 90 > th dose independent rect. 14 18
12 75.54 humidity 70.0 270 > th dose independent rect. 23 9
13 75.56 temperature 15.0 10 > th dose independent rect. 14 19
15 75.62 radiation 20.0 270 < th dose independent rect. 23 9
16 75.62 temperature 15.0 270 > th dose independent rect. 11 21
17 75.64 atmosphere 1010.0 270 < th dose independent rect. 23 9
24 75.84 temperature 30.0 270 < th dose independent rect. 23 9
25 75.84 humidity 50.0 270 > th dose independent rect. 23 9
27 75.84 atmosphere 995.0 270 > th dose independent rect. 23 9
28 75.84 temperature 10.0 270 > th dose independent rect. 8 15
31 75.88 precipitation 0.1 270 < th dose independent rect. 10 23
32 75.88 precipitation 0.1 270 < th dose dependent rect. 10 23
34 75.91 wind 9.0 270 < th dose independent rect. 8 15
43 76.05 wind 5.0 10 < th dose independent rect. 2 7
48 76.17 radiation 30.0 90 < th dose independent rect. 1 8
51 76.19 atmosphere 1000.0 10 > th dose independent rect. 20 6
56 76.23 precipitation 0.1 270 < th dose independent rect. 12 19
57 76.23 precipitation 0.1 270 < th dose dependent rect. 12 19
65 76.31 precipitation 0.1 10 < th dose independent rect. 9 17
66 76.31 precipitation 0.1 10 < th dose dependent rect. 9 17
68 76.33 radiation 40.0 90 < th dose independent rect. 13 19
79 76.41 wind 1.0 270 > th dose independent rect. 12 19
80 76.41 precipitation 0.1 10 < th dose independent rect. 14 19
81 76.41 precipitation 0.1 10 < th dose dependent rect. 14 19
82 76.44 radiation 30.0 1440 < th dose dependent rect. 12 1
83 76.49 radiation 40.0 270 < th dose dependent rect. 23 9
88 76.55 atmosphere 1000.0 270 > th dose independent rect. 18 8
90 76.56 temperature 10.0 10 > th dose independent rect. 2 7
92 76.56 temperature 30.0 10 < th dose independent rect. 2 7
93 76.56 humidity 50.0 10 > th dose independent rect. 2 7
95 76.56 atmosphere 995.0 10 > th dose independent rect. 2 7
96 76.56 atmosphere 1015.0 10 < th dose independent rect. 2 7
97 76.56 temperature 10.0 10 > th dose independent rect. 9 17
100 76.61 atmosphere 995.0 10 > th dose dependent rect. 20 6
101 76.61 radiation 40.0 90 < th dose dependent rect. 13 20
102 76.62 radiation 1.0 10 > th dose independent rect. 9 5
103 76.62 radiation 40.0 10 < th dose independent rect. 2 7
104 76.64 radiation 1.0 90 > th dose independent rect. 8 6
105 76.64 precipitation 0.1 270 < th dose independent rect. 8 15
107 76.64 precipitation 0.1 270 < th dose dependent rect. 8 15
114 76.67 wind 9.0 10 < th dose independent rect. 9 17
123 76.72 radiation 20.0 90 < th dose independent rect. 13 20
124 76.73 precipitation 0.1 90 < th dose independent rect. 8 6
125 76.73 precipitation 0.1 90 < th dose dependent rect. 8 6
143 76.78 wind 1.0 270 > th dose independent rect. 11 21
146 76.79 atmosphere 1010.0 90 < th dose independent rect. 14 18
148 76.79 wind 9.0 90 < th dose dependent rect. 1 8
149 76.80 humidity 80.0 10 < th dose independent rect. 9 5
166 76.84 temperature 10.0 90 > th dose independent rect. 8 6
167 76.84 atmosphere 995.0 90 > th dose independent rect. 8 6
168 76.84 atmosphere 1015.0 90 < th dose independent rect. 8 6
171 76.86 atmosphere 1010.0 270 < th dose independent rect. 12 19
174 76.88 temperature 10.0 1440 > th dose independent rect. 3 7
177 76.88 atmosphere 995.0 1440 > th dose independent rect. 3 7
179 76.88 temperature 10.0 1440 > th dose independent rect. 10 17
190 76.89 radiation 40.0 10 < th dose independent rect. 14 19
211 76.94 atmosphere 1000.0 30 > th dose independent rect. 20 16
215 76.97 wind 9.0 90 < th dose independent rect. 14 18
217 76.98 wind 9.0 270 < th dose independent rect. 7 5
221 77.00 temperature 10.0 270 > th dose independent rect. 8 2
222 77.00 atmosphere 995.0 270 > th dose independent rect. 8 2
223 77.00 atmosphere 1015.0 270 < th dose independent rect. 8 2
229 77.01 precipitation 0.1 270 < th dose independent rect. 8 3
233 77.01 precipitation 0.1 270 < th dose dependent rect. 8 3
235 77.02 humidity 50.0 270 > th dose independent rect. 8 2
237 77.02 temperature 10.0 10 > th dose independent rect. 9 5
239 77.02 atmosphere 995.0 10 > th dose independent rect. 9 5
240 77.02 atmosphere 1015.0 10 < th dose independent rect. 9 5
241 77.02 precipitation 0.1 10 < th dose independent rect. 9 5
242 77.02 atmosphere 1015.0 1440 < th dose independent rect. 3 7
250 77.02 atmosphere 995.0 90 > th dose independent rect. 14 18
255 77.02 precipitation 0.1 10 < th dose dependent rect. 9 5
259 77.03 wind 9.0 270 < th dose independent rect. 8 2
262 77.03 radiation 10.0 270 < th dose dependent rect. 17 10
285 77.06 wind 9.0 10 < th dose dependent rect. 2 7
286 77.07 humidity 50.0 270 > th dose independent rect. 7 5
289 77.07 precipitation 0.1 270 < th dose independent rect. 2 15
291 77.07 precipitation 0.1 270 < th dose dependent rect. 2 15
307 77.09 radiation 40.0 10 < th dose independent rect. 13 7
310 77.10 wind 1.0 270 > th dose independent rect. 12 7
315 77.11 wind 1.0 270 > th dose independent rect. 23 9
316 77.11 radiation 10.0 270 < th dose independent rect. 17 9
318 77.11 wind 9.0 270 < th dose independent rect. 12 19
325 77.12 radiation 40.0 10 < th dose dependent rect. 13 20
328 77.13 wind 9.0 270 < th dose dependent rect. 23 9
332 77.14 wind 9.0 10 < th dose independent rect. 14 19
336 77.15 atmosphere 1010.0 270 < th dose independent rect. 12 8
345 77.16 precipitation 0.1 270 < th dose independent rect. 12 8
346 77.16 humidity 60.0 270 > th dose independent rect. 17 9
352 77.16 precipitation 0.1 270 < th dose dependent rect. 12 8
356 77.17 temperature 30.0 270 < th dose independent rect. 17 9
359 77.18 humidity 50.0 270 > th dose dependent rect. 17 9
365 77.20 atmosphere 995.0 10 > th dose independent rect. 14 19
375 77.23 wind 9.0 10 < th dose independent rect. 9 5
378 77.23 temperature 15.0 270 > th dose independent rect. 12 8
411 77.29 temperature 10.0 10 > th dose dependent rect. 2 7
426 77.32 atmosphere 995.0 270 > th dose independent rect. 12 19
432 77.33 humidity 50.0 270 > th dose independent rect. 8 15
433 77.33 wind 9.0 270 < th dose independent rect. 11 21
469 77.38 temperature 15.0 270 > th dose independent rect. 2 15
473 77.38 radiation 20.0 1440 < th dose dependent rect. 14 1
476 77.39 radiation 20.0 1440 < th dose independent rect. 12 1
479 77.39 wind 9.0 270 < th dose dependent rect. 8 2
489 77.41 precipitation 0.1 10 < th dose independent rect. 2 18
492 77.41 precipitation 0.1 10 < th dose dependent rect. 2 18
515 77.43 radiation 40.0 270 < th dose dependent rect. 1 7
516 77.44 temperature 10.0 1440 > th dose independent rect. 10 5
524 77.44 temperature 10.0 1440 > th dose independent rect. 15 19
528 77.44 radiation 40.0 10 < th dose dependent rect. 13 7
542 77.48 radiation 1.0 270 > th dose independent rect. 8 3
571 77.53 atmosphere 1015.0 10 < th dose independent rect. 14 19
589 77.55 wind 9.0 270 < th dose independent rect. 17 9
590 77.55 temperature 10.0 270 > th dose independent rect. 20 16
599 77.56 atmosphere 995.0 270 > th dose independent rect. 8 15
611 77.57 atmosphere 1000.0 30 > th dose independent rect. 12 8
615 77.58 radiation 20.0 1440 < th dose independent rect. 12 3
635 77.61 atmosphere 995.0 10 > th dose independent rect. 9 17
638 77.62 temperature 10.0 270 > th dose independent rect. 17 9
644 77.62 atmosphere 1015.0 270 < th dose independent rect. 2 15
664 77.64 wind 1.0 270 > th dose independent rect. 9 1
682 77.66 wind 9.0 270 < th dose independent rect. 20 16
699 77.70 humidity 50.0 270 > th dose independent rect. 19 17
703 77.71 radiation 1.0 1440 < th dose independent rect. 11 1
706 77.71 radiation 1.0 1440 < th dose dependent rect. 11 1
715 77.73 wind 9.0 270 < th dose dependent rect. 7 6
752 77.77 atmosphere 995.0 270 > th dose independent rect. 11 21
762 77.78 radiation 30.0 1440 < th dose dependent rect. 12 3
766 77.79 wind 9.0 270 < th dose independent rect. 2 15
797 77.82 radiation 20.0 1440 > th dose independent rect. 12 1
799 77.82 wind 9.0 270 < th dose independent rect. 12 7
830 77.86 atmosphere 995.0 270 > th dose independent rect. 12 7
857 77.89 temperature 10.0 1440 > th dose independent rect. 13 8
860 77.89 temperature 10.0 1440 > th dose independent rect. 21 16
863 77.89 atmosphere 995.0 1440 > th dose independent rect. 21 16
866 77.90 wind 1.0 10 > th dose independent rect. 9 5
872 77.90 wind 9.0 10 < th dose dependent rect. 14 19
885 77.92 temperature 10.0 10 > th dose dependent rect. 9 5
896 77.93 atmosphere 1015.0 270 < th dose independent rect. 8 15
904 77.94 wind 1.0 270 > th dose independent rect. 8 3
905 77.94 wind 1.0 90 > th dose independent rect. 8 6
909 77.94 precipitation 0.1 30 < th dose independent rect. 12 8
914 77.94 precipitation 0.1 30 < th dose dependent rect. 12 8
918 77.95 atmosphere 995.0 270 > th dose independent rect. 2 15
971 78.02 precipitation 0.1 10 < th dose independent rect. 12 21
974 78.02 precipitation 0.1 10 < th dose dependent rect. 12 21
994 78.04 temperature 10.0 90 > th dose dependent rect. 8 6
999 78.05 precipitation 0.1 270 < th dose independent rect. 20 16