Os12g0166700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0166700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.73 | 0.26 | 14.7 | 0.908 | 0.73 | -0.484 | 0.214 | -0.135 | 0.448 | 23.4 | 25.8 | 15 | -- | -- |
| 30.73 | 0.258 | 14.7 | 0.922 | 0.729 | -0.494 | 0.223 | -- | 0.451 | 23.4 | 25.8 | 14 | -- | -- |
| 30.91 | 0.259 | 14.7 | 0.896 | 0.727 | -0.488 | -- | -0.282 | 0.446 | 23.4 | 25.8 | 15 | -- | -- |
| 30.95 | 0.259 | 14.7 | 0.915 | 0.725 | -0.507 | -- | -- | 0.451 | 23.4 | 25.8 | 14 | -- | -- |
| 57.87 | 0.356 | 14.6 | 1.06 | -- | -0.975 | -- | 0.48 | 0.542 | -- | 24.5 | 12 | -- | -- |
| 34.29 | 0.275 | 14.7 | 0.854 | 0.848 | -- | 0.326 | -- | 0.428 | 0.0911 | -- | -- | -- | -- |
| 34.75 | 0.276 | 14.7 | 0.841 | 0.846 | -- | -- | -- | 0.427 | 0.0704 | -- | -- | -- | -- |
| 57.99 | 0.356 | 14.7 | 0.997 | -- | -0.94 | -- | -- | 0.526 | -- | 24.5 | 12 | -- | -- |
| 52.13 | 0.338 | 14.7 | -- | 0.792 | -0.29 | -- | -- | 0.336 | 23.8 | 26.5 | 53 | -- | -- |
| 79.86 | 0.418 | 14.7 | 0.868 | -- | -- | -- | -- | 0.439 | -- | -- | -- | -- | -- |
| 53.39 | 0.342 | 14.7 | -- | 0.858 | -- | -- | -- | 0.333 | 0.125 | -- | -- | -- | -- |
| 83.65 | 0.427 | 14.7 | -- | -- | -0.815 | -- | -- | 0.401 | -- | 24.6 | 10 | -- | -- |
| 99.72 | 0.466 | 14.7 | -- | -- | -- | -- | -- | 0.343 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.87 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 2 | 29.89 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 3 | 29.90 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 4 | 29.92 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 13 | 30.12 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 37 | 30.35 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 51 | 30.48 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 55 | 30.49 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 65 | 30.56 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 70 | 30.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 71 | 30.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 72 | 30.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 13 |
| 73 | 30.60 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 95 | 30.66 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 96 | 30.66 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 105 | 30.68 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 106 | 30.69 | wind | 1.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 107 | 30.69 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 108 | 30.70 | temperature | 30.0 | 720 | > th | dose independent | rect. | 8 | 6 |
| 129 | 30.71 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 156 | 30.76 | temperature | 30.0 | 720 | > th | dose independent | sin | 7 | NA |
| 180 | 30.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 13 |
| 184 | 30.80 | temperature | 30.0 | 720 | < th | dose independent | sin | 6 | NA |
| 197 | 30.80 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 228 | 30.83 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 7 |
| 230 | 30.84 | wind | 1.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 235 | 30.84 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 241 | 30.84 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 296 | 30.90 | temperature | 25.0 | 10 | > th | dose dependent | no | NA | NA |
| 376 | 30.95 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 383 | 30.96 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 10 |
| 421 | 30.99 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 1 |
| 431 | 30.99 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 438 | 31.00 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 453 | 31.01 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 20 | 13 |
| 494 | 31.04 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 15 |
| 495 | 31.04 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 508 | 31.04 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 13 |
| 522 | 31.04 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 550 | 31.06 | temperature | 20.0 | 720 | < th | dose independent | rect. | 16 | 8 |
| 558 | 31.06 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 585 | 31.07 | wind | 1.0 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 611 | 31.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 633 | 31.08 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 8 | 12 |
| 699 | 31.11 | temperature | 25.0 | 10 | > th | dose dependent | sin | 22 | NA |
| 723 | 31.12 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 732 | 31.12 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 10 |
| 744 | 31.13 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 745 | 31.13 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 746 | 31.13 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 747 | 31.13 | temperature | 20.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 752 | 31.13 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 754 | 31.13 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 764 | 31.13 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 769 | 31.13 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 12 |
| 775 | 31.14 | temperature | 20.0 | 270 | < th | dose independent | rect. | 18 | 11 |
| 815 | 31.15 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 11 | 12 |
| 850 | 31.16 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 889 | 31.17 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 890 | 31.17 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 939 | 31.18 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 7 |
| 984 | 31.20 | temperature | 20.0 | 270 | < th | dose independent | sin | 13 | NA |
| 985 | 31.20 | temperature | 20.0 | 720 | < th | dose independent | rect. | 12 | 12 |
| 993 | 31.20 | wind | 7.0 | 14400 | < th | dose dependent | sin | 9 | NA |