Os12g0165300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0165300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.96 | 0.335 | 3.07 | 0.0352 | 0.0692 | 0.275 | 0.0937 | 0.668 | -0.0464 | 9.09 | 0.7406 | 4122 | -- | -- |
| 50.97 | 0.333 | 3.08 | -0.0133 | 0.0685 | 0.447 | 0.0891 | -- | -0.0407 | 9 | 0.661 | 4121 | -- | -- |
| 50.99 | 0.333 | 3.07 | 0.0454 | 0.0688 | 0.257 | -- | 0.762 | -0.0456 | 8.83 | 0.7595 | 4092 | -- | -- |
| 51 | 0.333 | 3.08 | -0.0172 | 0.0699 | 0.444 | -- | -- | -0.0458 | 8.77 | 0.6735 | 4113 | -- | -- |
| 51.26 | 0.333 | 3.07 | 0.0504 | -- | 0.246 | -- | 0.807 | -0.0454 | -- | 0.7668 | 4121 | -- | -- |
| 55.95 | 0.351 | 3.09 | 0.138 | 0.0675 | -- | 0.0734 | -- | -0.0795 | 8.32 | -- | -- | -- | -- |
| 55.97 | 0.35 | 3.09 | 0.14 | 0.0674 | -- | -- | -- | -0.0796 | 8.28 | -- | -- | -- | -- |
| 51.28 | 0.334 | 3.08 | -0.0169 | -- | 0.445 | -- | -- | -0.0455 | -- | 0.6638 | 4102 | -- | -- |
| 51.01 | 0.333 | 3.08 | -- | 0.0695 | 0.438 | -- | -- | -0.0449 | 8.78 | 0.6742 | 4117 | -- | -- |
| 56.22 | 0.35 | 3.09 | 0.141 | -- | -- | -- | -- | -0.0788 | -- | -- | -- | -- | -- |
| 56.49 | 0.352 | 3.09 | -- | 0.0682 | -- | -- | -- | -0.0952 | 8.13 | -- | -- | -- | -- |
| 51.28 | 0.334 | 3.08 | -- | -- | 0.439 | -- | -- | -0.0442 | -- | 0.6655 | 4096 | -- | -- |
| 56.74 | 0.352 | 3.1 | -- | -- | -- | -- | -- | -0.0944 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.63 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 2 | 49.42 | radiation | 40.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 41 | 50.41 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 63 | 50.73 | humidity | 60.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 64 | 50.85 | temperature | 30.0 | 30 | > th | dose independent | rect. | 13 | 1 |
| 69 | 50.99 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 5 |
| 71 | 51.03 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 16 |
| 86 | 51.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 87 | 51.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 15 | 4 |
| 88 | 51.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 89 | 51.15 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 94 | 51.16 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 18 |
| 115 | 51.24 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 23 | NA |
| 143 | 51.32 | wind | 3.0 | 30 | > th | dose independent | rect. | 13 | 2 |
| 194 | 51.46 | wind | 3.0 | 30 | > th | dose dependent | rect. | 13 | 2 |
| 208 | 51.50 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 11 |
| 314 | 51.67 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 15 |
| 392 | 51.75 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 18 |
| 425 | 51.81 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 18 |
| 432 | 51.81 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 18 |
| 434 | 51.82 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 17 | 10 |
| 436 | 51.82 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 491 | 51.86 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 568 | 52.00 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 23 | NA |
| 569 | 52.00 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 23 | NA |
| 573 | 52.00 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 23 | NA |
| 585 | 52.02 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 17 | 10 |
| 620 | 52.07 | radiation | 40.0 | 10 | > th | dose independent | sin | 13 | NA |
| 621 | 52.07 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 623 | 52.08 | radiation | 40.0 | 10 | < th | dose independent | sin | 13 | NA |
| 809 | 52.28 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 857 | 52.32 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 897 | 52.34 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 934 | 52.35 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 13 | 19 |
| 935 | 52.36 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 943 | 52.36 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 13 | 3 |