Os12g0164300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os12g0164300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.22 | 0.473 | 9.08 | -1.06 | 1.73 | 0.844 | 0.136 | -0.0515 | 0.325 | 20.3 | 70.01 | 1239 | -- | -- |
| 101.21 | 0.469 | 9.09 | -1.06 | 1.74 | 0.847 | 0.151 | -- | 0.321 | 20.3 | 70 | 1226 | -- | -- |
| 101.26 | 0.469 | 9.08 | -1.06 | 1.73 | 0.844 | -- | -0.0735 | 0.325 | 20.3 | 70.08 | 1233 | -- | -- |
| 101.27 | 0.469 | 9.09 | -1.07 | 1.74 | 0.844 | -- | -- | 0.321 | 20.3 | 70.14 | 1226 | -- | -- |
| 253.44 | 0.741 | 9.04 | -1.1 | -- | 0.816 | -- | -0.0834 | 0.3 | -- | 72.61 | 1415 | -- | -- |
| 126.73 | 0.528 | 9.11 | -1.26 | 1.67 | -- | 0.0553 | -- | 0.208 | 19.9 | -- | -- | -- | -- |
| 126.74 | 0.527 | 9.11 | -1.26 | 1.67 | -- | -- | -- | 0.208 | 19.9 | -- | -- | -- | -- |
| 253.45 | 0.741 | 9.04 | -1.12 | -- | 0.811 | -- | -- | 0.295 | -- | 72.66 | 1415 | -- | -- |
| 130.69 | 0.532 | 9.08 | -- | 1.76 | 1.02 | -- | -- | 0.392 | 20.3 | 69.29 | 1208 | -- | -- |
| 278.79 | 0.78 | 9.07 | -1.28 | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
| 168.42 | 0.607 | 9.08 | -- | 1.68 | -- | -- | -- | 0.348 | 19.8 | -- | -- | -- | -- |
| 284.98 | 0.786 | 9.05 | -- | -- | 0.953 | -- | -- | 0.368 | -- | 69.01 | 1410 | -- | -- |
| 321.79 | 0.837 | 9.04 | -- | -- | -- | -- | -- | 0.327 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.84 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 4 | 95.27 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 18 | 96.07 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 11 |
| 20 | 96.13 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 27 | 96.35 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 41 | 96.64 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 51 | 96.93 | humidity | 60 | 1440 | > th | dose dependent | rect. | 5 | 9 |
| 64 | 97.22 | humidity | 60 | 1440 | > th | dose dependent | rect. | 7 | 6 |
| 82 | 97.38 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 120 | 97.82 | humidity | 80 | 1440 | < th | dose dependent | sin | 7 | NA |
| 124 | 97.84 | humidity | 90 | 1440 | < th | dose dependent | sin | 5 | NA |
| 158 | 98.15 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 179 | 98.30 | humidity | 70 | 1440 | > th | dose independent | sin | 8 | NA |
| 212 | 98.61 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
| 224 | 98.70 | humidity | 80 | 1440 | > th | dose independent | sin | 4 | NA |
| 259 | 98.93 | humidity | 50 | 1440 | > th | dose dependent | sin | 4 | NA |
| 329 | 99.56 | humidity | 70 | 1440 | < th | dose independent | sin | 8 | NA |
| 893 | 103.26 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 21 |
| 919 | 103.36 | humidity | 70 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 935 | 103.49 | humidity | 70 | 720 | > th | dose independent | rect. | 6 | 18 |
| 977 | 103.68 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 994 | 103.78 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 21 |