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Os12g0162100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to MAP kinase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0136) R2 : 0.658
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.994 (0.0336) R2dC : 0.661 R2C : 0.657
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0277 (0.0287) R2dN8 : 0.000902 R2N8 : -0.00313
σ : 0.257
deviance : 30.2
__
_____
C
peak time of C : 9.44
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.86 0.23 10.4 -0.21 0.958 0.56 -0.186 -0.3 0.0313 10.9 59.86 277 -- --
23.97 0.228 10.4 -0.231 0.912 0.551 -0.154 -- 0.0351 10.9 62.1 335 -- --
23.96 0.228 10.4 -0.226 0.939 0.563 -- -0.245 0.0296 10.9 60.39 299 -- --
24.01 0.228 10.4 -0.239 0.914 0.547 -- -- 0.0398 10.9 63.81 335 -- --
44.6 0.311 10.4 -0.122 -- 1.33 -- -0.748 0.0348 -- 41.7 770 -- --
28.64 0.251 10.4 -0.226 0.993 -- -0.186 -- 0.002 9.42 -- -- -- --
28.77 0.251 10.4 -0.233 0.994 -- -- -- 0.00176 9.42 -- -- -- --
42.55 0.304 10.4 -0.265 -- 1.25 -- -- 0.0913 -- 68.97 777 -- --
25.49 0.235 10.4 -- 0.916 0.559 -- -- 0.0604 10.9 61.43 334 -- --
86.72 0.435 10.4 -0.239 -- -- -- -- 0.00512 -- -- -- -- --
30.2 0.257 10.4 -- 0.994 -- -- -- 0.0277 9.44 -- -- -- --
43.91 0.309 10.4 -- -- 1.27 -- -- 0.124 -- 67.57 773 -- --
88.22 0.438 10.4 -- -- -- -- -- 0.0316 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.92 humidity 70.0 270 > th dose dependent rect. 3 21
2 21.97 humidity 60.0 90 > th dose dependent rect. 5 21
3 22.00 humidity 80.0 270 > th dose dependent rect. 4 19
11 22.29 humidity 50.0 90 > th dose dependent rect. 5 12
26 22.59 temperature 30.0 90 < th dose independent rect. 5 12
31 22.70 humidity 90.0 270 > th dose independent rect. 4 20
61 23.04 temperature 10.0 270 > th dose dependent rect. 7 12
84 23.21 radiation 20.0 14400 < th dose independent rect. 3 3
85 23.21 humidity 90.0 270 < th dose independent rect. 7 12
87 23.22 radiation 1.0 720 < th dose independent rect. 5 19
88 23.23 radiation 1.0 720 > th dose independent rect. 16 21
102 23.32 humidity 50.0 10 > th dose dependent rect. 6 11
106 23.33 temperature 10.0 720 > th dose dependent rect. 7 5
108 23.33 radiation 1.0 720 < th dose dependent rect. 5 19
117 23.37 humidity 60.0 270 > th dose dependent rect. 18 22
133 23.44 humidity 90.0 270 > th dose dependent sin 21 NA
149 23.47 radiation 1.0 720 < th dose dependent rect. 4 21
206 23.62 temperature 10.0 270 > th dose dependent rect. 7 21
212 23.65 humidity 70.0 90 > th dose independent rect. 5 12
226 23.68 precipitation 0.1 720 < th dose independent rect. 7 22
230 23.68 precipitation 0.1 720 < th dose dependent rect. 7 22
242 23.72 humidity 80.0 720 < th dose independent rect. 17 1
248 23.72 humidity 90.0 720 < th dose dependent rect. 16 20
296 23.80 humidity 90.0 270 > th dose independent sin 22 NA
300 23.80 humidity 50.0 720 > th dose dependent rect. 19 4
320 23.83 humidity 60.0 270 > th dose dependent rect. 11 23
330 23.87 radiation 30.0 14400 < th dose independent rect. 16 11
335 23.88 humidity 60.0 270 > th dose dependent no NA NA
336 23.88 humidity 70.0 14400 < th dose dependent rect. 18 14
342 23.89 temperature 15.0 10 > th dose dependent rect. 8 12
349 23.90 radiation 30.0 14400 < th dose independent rect. 16 9
351 23.90 radiation 20.0 14400 < th dose independent rect. 18 12
352 23.90 humidity 70.0 14400 < th dose independent rect. 19 13
356 23.91 humidity 80.0 720 < th dose independent rect. 16 3
357 23.91 radiation 30.0 14400 < th dose independent rect. 16 3
380 23.93 humidity 90.0 720 < th dose independent rect. 7 16
391 23.94 radiation 1.0 720 < th dose independent rect. 4 14
409 23.96 humidity 50.0 14400 > th dose independent rect. 16 19
413 23.96 humidity 60.0 14400 < th dose dependent rect. 16 18
415 23.96 humidity 60.0 270 > th dose dependent rect. 9 23
426 23.98 radiation 30.0 14400 < th dose independent rect. 16 14
427 23.98 humidity 60.0 14400 < th dose independent rect. 17 16
428 23.98 precipitation 0.1 720 < th dose independent rect. 1 18
431 23.98 precipitation 0.1 720 < th dose dependent rect. 1 18
441 23.99 radiation 40.0 720 < th dose dependent rect. 5 2
444 24.00 radiation 1.0 720 > th dose independent rect. 7 6
445 24.00 humidity 70.0 720 > th dose independent rect. 19 12
475 24.02 temperature 20.0 90 > th dose dependent rect. 1 19
485 24.03 humidity 60.0 10 > th dose dependent rect. 6 18
493 24.04 humidity 60.0 1440 > th dose dependent rect. 11 1
502 24.05 humidity 80.0 1440 > th dose independent rect. 7 12
520 24.07 humidity 90.0 270 < th dose independent sin 22 NA
522 24.07 humidity 50.0 14400 < th dose independent rect. 16 19
525 24.07 temperature 30.0 90 < th dose dependent rect. 5 12
533 24.08 wind 1.0 720 > th dose independent rect. 17 2
535 24.08 humidity 70.0 90 > th dose independent rect. 19 22
537 24.08 humidity 70.0 14400 < th dose dependent rect. 18 4
555 24.09 radiation 1.0 720 < th dose independent rect. 5 12
562 24.09 radiation 1.0 720 < th dose dependent rect. 4 14
570 24.09 humidity 90.0 270 < th dose dependent rect. 14 23
571 24.10 humidity 80.0 270 > th dose independent sin 0 NA
573 24.10 wind 9.0 43200 > th dose dependent rect. 19 3
594 24.11 radiation 1.0 720 > th dose independent rect. 7 12
638 24.14 humidity 60.0 14400 < th dose independent rect. 17 3
653 24.14 temperature 30.0 30 < th dose independent rect. 5 21
654 24.14 humidity 70.0 14400 < th dose dependent rect. 18 1
725 24.19 temperature 25.0 270 > th dose independent rect. 23 20
732 24.20 wind 1.0 720 > th dose independent rect. 4 3
749 24.21 humidity 60.0 14400 > th dose independent rect. 17 3
750 24.21 humidity 60.0 14400 > th dose independent rect. 17 6
760 24.21 humidity 50.0 14400 > th dose independent rect. 17 17
764 24.21 precipitation 0.1 14400 > th dose dependent rect. 5 2
775 24.22 humidity 80.0 1440 < th dose independent sin 0 NA
776 24.22 radiation 1.0 720 > th dose independent rect. 16 3
797 24.22 wind 9.0 720 < th dose independent rect. 19 22
801 24.22 temperature 30.0 90 < th dose dependent rect. 5 18
803 24.22 humidity 90.0 270 < th dose dependent rect. 7 19
805 24.22 temperature 20.0 270 > th dose dependent rect. 22 21
808 24.23 precipitation 0.1 14400 < th dose independent rect. 5 2
817 24.23 precipitation 0.1 14400 < th dose dependent rect. 5 2
834 24.24 precipitation 0.1 14400 > th dose independent rect. 5 2
855 24.25 temperature 20.0 270 > th dose independent rect. 8 11
863 24.25 radiation 1.0 720 < th dose dependent rect. 5 12
886 24.26 wind 7.0 43200 < th dose independent rect. 12 17
890 24.26 humidity 50.0 270 > th dose dependent rect. 19 14
905 24.27 humidity 80.0 1440 > th dose independent sin 23 NA
913 24.27 wind 7.0 43200 > th dose independent rect. 12 17
919 24.27 wind 5.0 43200 > th dose dependent rect. 12 11
926 24.27 wind 5.0 43200 > th dose dependent rect. 11 18
935 24.28 humidity 90.0 720 < th dose independent rect. 7 5