Os12g0160000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0160000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 164.71 | 0.603 | 6.04 | 0.669 | 0.565 | -1.86 | 0.58 | -0.617 | -0.0303 | 6.54 | 22 | 1110 | -- | -- |
| 165.3 | 0.599 | 6.02 | 0.814 | 0.578 | -1.8 | 0.679 | -- | 0.0222 | 6.67 | 22.13 | 1130 | -- | -- |
| 165.5 | 0.599 | 6.04 | 0.659 | 0.565 | -1.87 | -- | -0.674 | -0.0383 | 6.36 | 22 | 1109 | -- | -- |
| 166.18 | 0.6 | 6.02 | 0.807 | 0.534 | -1.78 | -- | -- | 0.015 | 6.16 | 22.1 | 1036 | -- | -- |
| 176.69 | 0.619 | 6.05 | 0.631 | -- | -1.78 | -- | -0.523 | -0.0332 | -- | 22.04 | 831 | -- | -- |
| 291.39 | 0.8 | 6.15 | 0.165 | 0.63 | -- | 0.782 | -- | -0.575 | 7.98 | -- | -- | -- | -- |
| 293.19 | 0.802 | 6.15 | 0.186 | 0.631 | -- | -- | -- | -0.576 | 7.89 | -- | -- | -- | -- |
| 177.59 | 0.621 | 6.04 | 0.778 | -- | -1.75 | -- | -- | 0.00756 | -- | 22.12 | 807 | -- | -- |
| 181.16 | 0.627 | 6.05 | -- | 0.526 | -1.59 | -- | -- | -0.12 | 6.1 | 22.21 | 983 | -- | -- |
| 314.83 | 0.829 | 6.17 | 0.193 | -- | -- | -- | -- | -0.567 | -- | -- | -- | -- | -- |
| 294.11 | 0.802 | 6.16 | -- | 0.632 | -- | -- | -- | -0.596 | 7.87 | -- | -- | -- | -- |
| 192.1 | 0.646 | 6.06 | -- | -- | -1.57 | -- | -- | -0.116 | -- | 22.21 | 779 | -- | -- |
| 315.81 | 0.829 | 6.17 | -- | -- | -- | -- | -- | -0.589 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 169.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 3 | 169.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 4 | 169.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 6 | 170.05 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 16 | 170.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 30 | 171.33 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 47 | 171.82 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 69 | 172.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 75 | 172.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 86 | 172.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 90 | 172.71 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 99 | 172.84 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 106 | 172.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 146 | 173.62 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 209 | 174.55 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 263 | 175.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 272 | 175.50 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 338 | 176.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 362 | 176.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 425 | 176.80 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 429 | 176.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 459 | 176.98 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 534 | 177.38 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 681 | 178.24 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 875 | 179.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 890 | 179.83 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 966 | 180.42 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |