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Os12g0158700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.79 (0.0281) R2 : 0.827
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.32 (0.0725) R2dC : 0.799 R2C : 0.799
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.447 (0.0592) R2dN8 : 0.0281 R2N8 : 0.0278
σ : 0.53
deviance : 128.51
__
_____
C
peak time of C : 4.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
107.52 0.487 9.85 -0.24 3.46 -0.473 -1.22 3.17 0.293 4.51 0.995 5167 -- --
113.36 0.496 9.82 0.0307 3.37 -0.938 -0.396 -- 0.305 4.51 0.1727 10967 -- --
109.46 0.487 9.87 -0.225 3.34 -0.27 -- 2.8 0.266 4.47 0.574 5430 -- --
113.63 0.496 9.82 0.0797 3.39 -0.884 -- -- 0.305 4.51 0.2876 10967 -- --
166.65 0.601 9.91 0.334 -- 3.23 -- 1.15 0.183 -- 1.687 547 -- --
123.65 0.521 9.78 0.4 3.31 -- -0.456 -- 0.49 4.4 -- -- -- --
124.21 0.522 9.77 0.404 3.31 -- -- -- 0.492 4.41 -- -- -- --
142.25 0.555 9.78 0.588 -- 3.43 -- -- 0.678 -- 3.171 566 -- --
113.64 0.497 9.8 -- 3.39 -0.941 -- -- 0.321 4.54 0.2144 10960 -- --
712.33 1.25 9.8 0.534 -- -- -- -- 0.58 -- -- -- -- --
128.51 0.53 9.79 -- 3.32 -- -- -- 0.447 4.4 -- -- -- --
151.24 0.573 9.79 -- -- 3.43 -- -- 0.621 -- 3.777 566 -- --
719.85 1.25 9.81 -- -- -- -- -- 0.521 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 97.32 wind 9.0 270 < th dose independent rect. 11 13
2 97.45 precipitation 0.1 270 < th dose independent rect. 24 11
3 97.45 precipitation 0.1 270 < th dose dependent rect. 24 11
4 98.59 temperature 15.0 270 > th dose independent rect. 24 11
5 98.76 wind 9.0 270 < th dose independent rect. 5 11
7 99.07 atmosphere 995.0 270 > th dose independent rect. 24 11
8 99.07 temperature 10.0 270 > th dose independent rect. 11 13
9 99.08 atmosphere 1015.0 270 < th dose independent rect. 24 11
10 99.09 wind 9.0 720 < th dose independent rect. 11 6
11 99.11 wind 9.0 270 < th dose independent rect. 24 11
13 99.24 radiation 30.0 270 < th dose independent rect. 16 13
14 99.37 precipitation 0.1 270 < th dose independent rect. 11 13
15 99.37 precipitation 0.1 270 < th dose dependent rect. 11 13
16 99.62 temperature 10.0 270 > th dose independent rect. 5 11
17 99.62 atmosphere 1015.0 270 < th dose independent rect. 5 11
18 99.62 temperature 10.0 270 > th dose independent rect. 16 13
20 99.63 humidity 50.0 720 > th dose dependent rect. 21 2
21 99.85 humidity 50.0 270 > th dose independent rect. 24 11
22 99.95 temperature 20.0 720 > th dose independent rect. 9 2
23 100.01 wind 9.0 270 < th dose dependent rect. 12 12
24 100.02 humidity 50.0 720 > th dose dependent rect. 19 5
25 100.05 wind 9.0 14400 < th dose independent rect. 23 4
27 100.27 precipitation 0.1 270 < th dose independent rect. 5 11
28 100.27 precipitation 0.1 270 < th dose dependent rect. 5 11
29 100.29 temperature 30.0 270 < th dose independent rect. 24 11
33 100.83 precipitation 0.1 270 < th dose independent rect. 16 13
34 100.83 precipitation 0.1 270 < th dose dependent rect. 16 13
35 100.91 atmosphere 995.0 270 > th dose independent rect. 16 13
36 100.94 temperature 15.0 720 > th dose independent rect. 1 18
38 101.02 humidity 70.0 720 > th dose independent rect. 19 6
39 101.03 wind 9.0 270 < th dose independent rect. 16 13
41 101.12 wind 9.0 720 < th dose independent rect. 21 19
42 101.25 humidity 70.0 720 > th dose independent rect. 21 10
43 101.25 wind 9.0 720 < th dose independent rect. 5 18
45 101.29 wind 9.0 720 < th dose independent rect. 19 22
47 101.36 temperature 15.0 720 > th dose independent rect. 23 22
49 101.47 radiation 30.0 720 < th dose independent rect. 21 10
50 101.49 humidity 50.0 14400 > th dose independent rect. 19 12
51 101.51 temperature 10.0 720 > th dose independent rect. 21 10
52 101.51 temperature 30.0 720 < th dose independent rect. 21 10
53 101.51 humidity 50.0 720 > th dose independent rect. 21 10
55 101.51 atmosphere 995.0 720 > th dose independent rect. 21 10
57 101.51 temperature 10.0 720 > th dose independent rect. 7 14
58 101.54 radiation 40.0 270 < th dose independent rect. 24 11
59 101.55 wind 9.0 720 < th dose independent rect. 21 10
63 101.66 temperature 10.0 720 > th dose independent rect. 9 10
64 101.66 atmosphere 1015.0 720 < th dose independent rect. 9 10
65 101.66 temperature 10.0 720 > th dose independent rect. 19 14
66 101.66 humidity 50.0 720 > th dose independent rect. 19 14
67 101.66 atmosphere 995.0 720 > th dose independent rect. 19 14
69 101.71 wind 9.0 720 < th dose independent rect. 19 14
71 101.83 temperature 15.0 720 > th dose independent rect. 17 11
72 101.84 temperature 15.0 720 > th dose independent rect. 13 18
74 101.85 humidity 60.0 90 > th dose dependent rect. 21 6
80 101.97 temperature 15.0 720 > th dose independent rect. 24 5
81 101.99 temperature 10.0 720 > th dose independent rect. 11 6
82 101.99 atmosphere 1015.0 720 < th dose independent rect. 11 6
83 101.99 temperature 10.0 720 > th dose independent rect. 17 18
86 102.09 wind 5.0 270 < th dose independent rect. 21 3
95 102.34 humidity 50.0 43200 > th dose independent rect. 23 5
96 102.37 humidity 70.0 10 > th dose dependent rect. 22 5
97 102.39 wind 9.0 720 < th dose independent rect. 3 14
98 102.40 radiation 10.0 720 < th dose independent rect. 23 6
104 102.47 temperature 30.0 720 < th dose independent rect. 23 6
105 102.47 humidity 50.0 720 > th dose independent rect. 23 6
108 102.47 atmosphere 995.0 720 > th dose independent rect. 23 6
112 102.47 temperature 10.0 720 > th dose independent rect. 5 18
114 102.48 wind 9.0 720 < th dose independent rect. 23 6
117 102.50 radiation 40.0 720 < th dose dependent rect. 23 6
121 102.55 temperature 15.0 720 > th dose independent rect. 1 3
123 102.57 atmosphere 1000.0 90 > th dose independent rect. 9 12
129 102.62 atmosphere 995.0 270 > th dose independent rect. 5 11
131 102.64 wind 9.0 720 < th dose independent rect. 13 10
132 102.66 wind 9.0 90 < th dose dependent rect. 21 6
139 102.74 temperature 15.0 720 > th dose independent rect. 11 22
140 102.78 humidity 80.0 270 > th dose independent rect. 21 3
141 102.79 wind 5.0 90 < th dose independent rect. 21 6
143 102.86 wind 9.0 720 < th dose independent rect. 13 18
146 102.91 wind 9.0 720 < th dose independent rect. 11 22
151 102.99 atmosphere 1000.0 90 > th dose independent rect. 3 18
152 103.00 radiation 40.0 270 < th dose dependent rect. 16 13
153 103.01 wind 9.0 270 < th dose dependent rect. 21 3
154 103.02 temperature 10.0 270 > th dose dependent rect. 21 3
155 103.03 atmosphere 1015.0 720 < th dose independent rect. 7 14
166 103.06 precipitation 0.1 720 < th dose independent rect. 23 6
167 103.06 precipitation 0.1 720 < th dose dependent rect. 23 6
172 103.12 precipitation 0.1 10 < th dose independent rect. 3 19
173 103.12 precipitation 0.1 10 < th dose dependent rect. 3 19
177 103.18 temperature 30.0 720 < th dose independent rect. 19 14
183 103.24 wind 1.0 270 > th dose independent rect. 4 12
186 103.31 precipitation 0.1 270 < th dose independent rect. 24 21
187 103.31 precipitation 0.1 270 < th dose dependent rect. 24 21
189 103.33 atmosphere 995.0 10 > th dose independent rect. 3 19
191 103.34 temperature 10.0 720 > th dose independent rect. 13 10
192 103.34 temperature 10.0 720 > th dose independent rect. 23 14
193 103.34 atmosphere 995.0 720 > th dose independent rect. 23 14
195 103.37 wind 7.0 720 < th dose independent rect. 4 5
208 103.46 wind 9.0 720 < th dose independent rect. 4 21
211 103.49 precipitation 0.1 270 < th dose independent rect. 21 3
212 103.49 wind 5.0 10 < th dose independent rect. 22 5
213 103.49 precipitation 0.1 270 < th dose dependent rect. 21 3
214 103.50 humidity 80.0 90 > th dose independent rect. 21 6
215 103.51 temperature 15.0 720 > th dose independent rect. 7 6
216 103.52 temperature 15.0 720 > th dose independent rect. 19 6
217 103.52 atmosphere 1015.0 720 < th dose independent rect. 1 18
226 103.59 temperature 10.0 10 > th dose dependent rect. 22 5
228 103.61 wind 1.0 720 > th dose independent rect. 17 2
237 103.68 precipitation 0.1 720 < th dose independent rect. 9 10
240 103.68 precipitation 0.1 720 < th dose dependent rect. 9 10
243 103.70 wind 9.0 720 < th dose independent rect. 17 18
244 103.70 temperature 15.0 90 > th dose independent rect. 3 18
249 103.74 temperature 10.0 270 > th dose independent rect. 21 3
250 103.74 temperature 30.0 270 < th dose independent rect. 21 3
251 103.74 humidity 50.0 270 > th dose independent rect. 21 3
254 103.74 atmosphere 995.0 270 > th dose independent rect. 21 3
255 103.74 radiation 1.0 270 < th dose independent rect. 21 3
261 103.74 atmosphere 995.0 270 > th dose independent rect. 24 21
262 103.74 radiation 1.0 270 < th dose dependent rect. 21 3
269 103.75 atmosphere 1000.0 10 > th dose independent rect. 10 12
272 103.77 radiation 40.0 270 < th dose dependent rect. 24 11
279 103.83 precipitation 0.1 90 < th dose independent rect. 21 6
281 103.83 precipitation 0.1 90 < th dose dependent rect. 21 6
286 103.87 wind 9.0 720 < th dose independent rect. 13 3
287 103.88 temperature 20.0 270 > th dose independent rect. 21 3
299 103.96 temperature 10.0 720 > th dose independent rect. 16 5
300 103.96 radiation 40.0 720 < th dose independent rect. 16 5
301 103.96 temperature 10.0 720 > th dose independent rect. 21 19
304 103.98 precipitation 0.1 720 < th dose independent rect. 11 6
305 103.98 precipitation 0.1 720 < th dose dependent rect. 11 6
311 104.00 radiation 1.0 90 < th dose dependent rect. 21 6
312 104.01 temperature 10.0 90 > th dose independent rect. 21 6
313 104.01 temperature 30.0 90 < th dose independent rect. 21 6
314 104.01 humidity 50.0 90 > th dose independent rect. 21 6
317 104.01 atmosphere 995.0 90 > th dose independent rect. 21 6
318 104.01 radiation 1.0 90 < th dose independent rect. 21 6
324 104.01 atmosphere 1015.0 90 < th dose independent rect. 3 18
330 104.02 atmosphere 1015.0 270 < th dose independent rect. 24 21
335 104.09 temperature 10.0 720 > th dose independent rect. 17 2
336 104.09 humidity 70.0 720 > th dose independent rect. 5 2
337 104.09 atmosphere 1015.0 720 < th dose independent rect. 17 2
338 104.09 radiation 30.0 720 < th dose independent rect. 17 2
340 104.09 temperature 10.0 720 > th dose independent rect. 19 22
342 104.10 precipitation 0.1 10 < th dose independent rect. 22 5
343 104.10 precipitation 0.1 10 < th dose dependent rect. 22 5
351 104.16 wind 1.0 720 > th dose independent rect. 16 5
353 104.16 temperature 10.0 10 > th dose independent rect. 22 5
354 104.16 temperature 30.0 10 < th dose independent rect. 22 5
355 104.16 humidity 50.0 10 > th dose independent rect. 22 5
358 104.16 atmosphere 995.0 10 > th dose independent rect. 22 5
359 104.16 radiation 1.0 10 < th dose independent rect. 22 5
364 104.16 temperature 10.0 10 > th dose independent rect. 3 19
366 104.16 atmosphere 1015.0 10 < th dose independent rect. 3 19
367 104.16 radiation 1.0 10 < th dose dependent rect. 22 5
374 104.18 precipitation 0.1 90 < th dose independent rect. 3 18
377 104.18 precipitation 0.1 90 < th dose dependent rect. 3 18
379 104.19 wind 5.0 720 < th dose independent rect. 5 2
397 104.25 humidity 60.0 720 > th dose independent rect. 4 5
408 104.28 temperature 10.0 720 > th dose independent rect. 4 5
410 104.28 atmosphere 995.0 720 > th dose independent rect. 4 5
411 104.28 atmosphere 1015.0 720 < th dose independent rect. 4 5
412 104.28 temperature 10.0 720 > th dose independent rect. 9 19
413 104.29 radiation 30.0 720 < th dose independent rect. 5 2
423 104.32 temperature 10.0 720 > th dose independent rect. 5 2
424 104.32 temperature 30.0 720 < th dose independent rect. 5 2
425 104.32 humidity 50.0 720 > th dose independent rect. 5 2
427 104.32 atmosphere 995.0 720 > th dose independent rect. 5 2
428 104.32 atmosphere 1015.0 720 < th dose independent rect. 5 2
431 104.32 wind 9.0 720 < th dose independent rect. 19 6
434 104.32 temperature 30.0 720 < th dose independent rect. 19 6
435 104.32 humidity 50.0 720 > th dose independent rect. 19 6
436 104.32 atmosphere 995.0 720 > th dose independent rect. 19 6
437 104.32 radiation 1.0 720 < th dose independent rect. 19 6
444 104.32 temperature 10.0 720 > th dose independent rect. 7 22
446 104.32 radiation 1.0 720 < th dose dependent rect. 19 6
482 104.40 atmosphere 995.0 720 > th dose independent rect. 7 6
483 104.40 atmosphere 1015.0 720 < th dose independent rect. 7 6
486 104.41 wind 9.0 30 < th dose dependent rect. 3 10
491 104.46 radiation 1.0 720 > th dose independent rect. 9 2
500 104.49 precipitation 0.1 720 < th dose independent rect. 23 14
501 104.49 precipitation 0.1 720 < th dose dependent rect. 23 14
505 104.52 precipitation 0.1 720 < th dose independent rect. 7 6
506 104.52 precipitation 0.1 720 < th dose dependent rect. 7 6
507 104.53 humidity 50.0 14400 > th dose independent rect. 19 4
510 104.53 precipitation 0.1 720 < th dose independent rect. 21 10
511 104.53 precipitation 0.1 720 < th dose dependent rect. 21 10
532 104.59 radiation 40.0 270 < th dose independent rect. 24 20
545 104.64 precipitation 0.1 720 < th dose independent rect. 5 2
546 104.64 precipitation 0.1 720 < th dose dependent rect. 5 2
550 104.66 precipitation 0.1 720 < th dose independent rect. 4 5
551 104.66 precipitation 0.1 720 < th dose dependent rect. 4 5
557 104.68 atmosphere 1015.0 720 < th dose independent rect. 16 5
597 104.82 wind 9.0 270 < th dose independent rect. 24 21
610 104.86 humidity 50.0 270 > th dose independent rect. 5 11
613 104.87 temperature 20.0 90 > th dose independent rect. 9 12
617 104.90 temperature 30.0 720 < th dose independent rect. 4 5
625 104.93 wind 9.0 10 < th dose independent rect. 3 19
638 104.99 wind 9.0 90 < th dose independent rect. 3 18
642 105.00 humidity 50.0 720 > th dose dependent rect. 5 2
646 105.02 atmosphere 1015.0 720 < th dose independent rect. 24 5
654 105.05 atmosphere 1000.0 720 > th dose independent rect. 9 2
683 105.13 precipitation 0.1 720 < th dose independent rect. 9 2
686 105.13 precipitation 0.1 720 < th dose dependent rect. 9 2
692 105.15 wind 1.0 270 > th dose independent rect. 11 13
699 105.17 wind 9.0 720 < th dose independent rect. 17 2
705 105.18 atmosphere 1015.0 720 < th dose independent rect. 9 2
709 105.18 radiation 30.0 30 < th dose dependent rect. 16 14
715 105.21 temperature 10.0 720 > th dose dependent rect. 17 2
731 105.24 precipitation 0.1 720 < th dose independent rect. 17 2
740 105.24 precipitation 0.1 720 < th dose dependent rect. 17 2
762 105.28 radiation 20.0 14400 < th dose independent rect. 4 2
765 105.29 wind 1.0 270 > th dose independent rect. 15 13
778 105.33 precipitation 0.1 720 < th dose independent rect. 1 3
781 105.33 precipitation 0.1 720 < th dose dependent rect. 1 3
820 105.41 temperature 10.0 720 > th dose independent rect. 13 3
821 105.41 atmosphere 1015.0 720 < th dose independent rect. 13 3
823 105.41 wind 9.0 270 < th dose dependent rect. 24 11
860 105.45 atmosphere 1015.0 720 < th dose independent rect. 1 3
895 105.59 wind 9.0 720 < th dose independent rect. 1 3
897 105.59 temperature 30.0 720 < th dose independent rect. 1 3
898 105.59 humidity 50.0 720 > th dose independent rect. 1 3
901 105.59 atmosphere 995.0 720 > th dose independent rect. 1 3
902 105.59 radiation 1.0 720 < th dose independent rect. 1 3
907 105.59 temperature 10.0 720 > th dose independent rect. 4 21
908 105.59 radiation 1.0 720 < th dose dependent rect. 1 3
916 105.60 wind 9.0 720 < th dose independent rect. 12 20
918 105.61 wind 9.0 720 < th dose independent rect. 9 2
942 105.62 wind 9.0 720 < th dose independent rect. 17 11
943 105.62 precipitation 0.1 720 < th dose independent rect. 7 14
950 105.62 precipitation 0.1 720 < th dose dependent rect. 7 14
952 105.63 radiation 1.0 90 < th dose dependent rect. 3 18
984 105.69 wind 1.0 270 > th dose independent rect. 21 2