Os12g0157700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0157700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 321.38 | 0.842 | 4.17 | 0.0728 | 0.109 | 1.25 | 0.162 | -0.316 | -0.535 | 7.98 | 22.7 | 555 | -- | -- |
| 321.45 | 0.835 | 4.17 | 0.0362 | 0.107 | 1.32 | 0.087 | -- | -0.543 | 7.99 | 22.6 | 539 | -- | -- |
| 321.43 | 0.835 | 4.17 | 0.0617 | 0.109 | 1.28 | -- | -0.188 | -0.539 | 8.1 | 22.63 | 539 | -- | -- |
| 321.47 | 0.835 | 4.17 | 0.0409 | 0.107 | 1.32 | -- | -- | -0.543 | 8.08 | 22.6 | 538 | -- | -- |
| 322.05 | 0.836 | 4.17 | 0.0624 | -- | 1.32 | -- | -0.149 | -0.534 | -- | 22.65 | 549 | -- | -- |
| 341.19 | 0.866 | 4.21 | -0.277 | 0.219 | -- | 0.0386 | -- | -0.729 | 8.33 | -- | -- | -- | -- |
| 341.2 | 0.865 | 4.21 | -0.276 | 0.219 | -- | -- | -- | -0.729 | 8.33 | -- | -- | -- | -- |
| 322.07 | 0.836 | 4.17 | 0.0527 | -- | 1.36 | -- | -- | -0.535 | -- | 22.6 | 544 | -- | -- |
| 321.51 | 0.835 | 4.17 | -- | 0.109 | 1.3 | -- | -- | -0.549 | 8.13 | 22.6 | 536 | -- | -- |
| 343.86 | 0.866 | 4.22 | -0.275 | -- | -- | -- | -- | -0.727 | -- | -- | -- | -- | -- |
| 343.21 | 0.867 | 4.2 | -- | 0.218 | -- | -- | -- | -0.699 | 8.43 | -- | -- | -- | -- |
| 322.14 | 0.836 | 4.17 | -- | -- | 1.33 | -- | -- | -0.544 | -- | 22.6 | 542 | -- | -- |
| 345.86 | 0.868 | 4.21 | -- | -- | -- | -- | -- | -0.696 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 321.71 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 21 |
| 2 | 321.86 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 110 | 321.88 | atmosphere | 1010.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 111 | 321.92 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 112 | 321.95 | wind | 5.0 | 90 | > th | dose dependent | rect. | 2 | 9 |
| 115 | 322.05 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 3 | 1 |
| 116 | 322.14 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 19 |
| 117 | 322.15 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 226 | 322.33 | atmosphere | 1010.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 237 | 322.43 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 239 | 322.50 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 3 |
| 240 | 322.51 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 255 | 322.59 | temperature | 20.0 | 720 | < th | dose independent | rect. | 1 | 2 |
| 258 | 322.63 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 5 |
| 259 | 322.64 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 261 | 322.69 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 5 |
| 268 | 322.77 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 15 |
| 289 | 322.91 | temperature | 20.0 | 720 | > th | dose independent | rect. | 22 | 9 |
| 307 | 323.16 | atmosphere | 1010.0 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 317 | 323.16 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 11 |
| 371 | 323.23 | atmosphere | 1010.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 389 | 323.30 | atmosphere | 1010.0 | 270 | > th | dose dependent | sin | 2 | NA |
| 390 | 323.31 | temperature | 20.0 | 720 | > th | dose independent | rect. | 9 | 22 |
| 391 | 323.31 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 407 | 323.39 | temperature | 20.0 | 720 | > th | dose independent | sin | 10 | NA |
| 498 | 323.41 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 501 | 323.44 | wind | 7.0 | 90 | > th | dose independent | rect. | 2 | 9 |
| 523 | 323.46 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 22 |
| 527 | 323.48 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 574 | 323.55 | temperature | 20.0 | 720 | < th | dose independent | sin | 11 | NA |
| 604 | 323.61 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 613 | 323.63 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 614 | 323.64 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 616 | 323.65 | atmosphere | 1010.0 | 30 | > th | dose independent | sin | 22 | NA |
| 648 | 323.71 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 650 | 323.71 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 666 | 323.75 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 16 | 20 |
| 667 | 323.76 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 669 | 323.76 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 12 |
| 678 | 323.79 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 9 |
| 686 | 323.80 | temperature | 25.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 729 | 323.92 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 13 |
| 734 | 323.94 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 742 | 323.98 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 9 | 4 |
| 750 | 323.98 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 756 | 323.99 | temperature | 20.0 | 720 | < th | dose independent | rect. | 16 | 15 |
| 809 | 324.09 | atmosphere | 1010.0 | 30 | > th | dose independent | rect. | 24 | 13 |
| 826 | 324.10 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 827 | 324.10 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 17 |
| 833 | 324.11 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 834 | 324.11 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 23 | 14 |
| 835 | 324.11 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 22 | 16 |
| 840 | 324.12 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 948 | 324.14 | temperature | 20.0 | 720 | < th | dose independent | rect. | 16 | 18 |
| 967 | 324.18 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 968 | 324.19 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 972 | 324.19 | temperature | 20.0 | 720 | < th | dose independent | rect. | 11 | 20 |
| 974 | 324.19 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 986 | 324.21 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 2 | 9 |
| 998 | 324.22 | temperature | 20.0 | 720 | < th | dose independent | rect. | 9 | 22 |