Os12g0157200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EF-Hand type domain containing protein.
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Os12g0157200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EF-Hand type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46 | 0.319 | 11.3 | -0.738 | 0.668 | -0.701 | -0.171 | 0.46 | 0.0111 | 1.35 | 24.9 | 80 | -- | -- |
| 46.25 | 0.317 | 11.3 | -0.662 | 0.677 | -0.73 | -0.031 | -- | 0.027 | 1.3 | 24.8 | 58 | -- | -- |
| 46.09 | 0.316 | 11.3 | -0.711 | 0.67 | -0.712 | -- | 0.321 | 0.018 | 1.33 | 24.8 | 70 | -- | -- |
| 45.67 | 0.317 | 11.2 | -0.657 | 0.667 | -0.836 | -- | -- | 0.0596 | 1.14 | 22.94 | 38 | -- | -- |
| 61.44 | 0.365 | 11.3 | -0.93 | -- | -0.732 | -- | 1.17 | -0.0455 | -- | 28.4 | 1000 | -- | -- |
| 54.2 | 0.345 | 11.2 | -0.489 | 0.543 | -- | -0.029 | -- | 0.167 | 1.21 | -- | -- | -- | -- |
| 54.21 | 0.345 | 11.2 | -0.488 | 0.543 | -- | -- | -- | 0.168 | 1.21 | -- | -- | -- | -- |
| 62.78 | 0.369 | 11.3 | -0.728 | -- | -0.822 | -- | -- | -0.0238 | -- | 26.47 | 989 | -- | -- |
| 56.1 | 0.351 | 11.2 | -- | 0.617 | -0.582 | -- | -- | 0.162 | 1.12 | 22.8 | 32 | -- | -- |
| 72.47 | 0.398 | 11.2 | -0.467 | -- | -- | -- | -- | 0.179 | -- | -- | -- | -- | -- |
| 60.49 | 0.364 | 11.2 | -- | 0.535 | -- | -- | -- | 0.222 | 1.18 | -- | -- | -- | -- |
| 73.92 | 0.4 | 11.2 | -- | -- | -0.484 | -- | -- | 0.138 | -- | 26.34 | 926 | -- | -- |
| 78.23 | 0.413 | 11.2 | -- | -- | -- | -- | -- | 0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.52 | temperature | 20.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 6 | 43.01 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 10 |
| 11 | 43.35 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 16 |
| 12 | 43.35 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 24 | 43.54 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 26 | 43.54 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 37 | 43.68 | temperature | 20.0 | 10 | > th | dose independent | rect. | 11 | 18 |
| 57 | 43.84 | temperature | 25.0 | 270 | < th | dose dependent | sin | 12 | NA |
| 78 | 44.06 | temperature | 20.0 | 10 | > th | dose independent | rect. | 13 | 16 |
| 89 | 44.09 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 16 |
| 100 | 44.13 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 19 |
| 202 | 44.37 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 12 |
| 212 | 44.39 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 237 | 44.43 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 246 | 44.45 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 247 | 44.45 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 341 | 44.56 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 348 | 44.58 | temperature | 20.0 | 270 | > th | dose independent | rect. | 9 | 18 |
| 386 | 44.63 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 407 | 44.70 | temperature | 10.0 | 270 | > th | dose dependent | sin | 12 | NA |
| 443 | 44.80 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 448 | 44.81 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 452 | 44.82 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 462 | 44.83 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 472 | 44.85 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 513 | 44.94 | temperature | 20.0 | 90 | > th | dose independent | rect. | 6 | 23 |
| 549 | 45.00 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 573 | 45.06 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 584 | 45.08 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 628 | 45.18 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 682 | 45.33 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 687 | 45.34 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 699 | 45.36 | temperature | 25.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 704 | 45.37 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 6 |
| 713 | 45.39 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 714 | 45.39 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 11 |
| 715 | 45.39 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 14 |
| 722 | 45.40 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 22 |
| 739 | 45.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 752 | 45.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 753 | 45.46 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 757 | 45.46 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 758 | 45.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 801 | 45.53 | temperature | 20.0 | 270 | > th | dose independent | sin | 13 | NA |
| 823 | 45.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 825 | 45.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 826 | 45.56 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 831 | 45.57 | temperature | 20.0 | 90 | < th | dose independent | sin | 12 | NA |
| 847 | 45.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 849 | 45.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 854 | 45.60 | humidity | 90.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 870 | 45.61 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 871 | 45.61 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 913 | 45.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 918 | 45.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 4 |
| 946 | 45.68 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 969 | 45.70 | temperature | 20.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 979 | 45.71 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 980 | 45.71 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 987 | 45.71 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 988 | 45.71 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 991 | 45.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 4 |