Os12g0156400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dcp1-like decapping family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0156400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Dcp1-like decapping family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.03 | 0.301 | 11.7 | 0.906 | 0.291 | 0.415 | -0.0163 | 0.0804 | 0.639 | 16.3 | 20.6 | 95 | -- | -- |
| 41.06 | 0.298 | 11.7 | 0.89 | 0.291 | 0.411 | 0.0234 | -- | 0.637 | 16.3 | 20.5 | 93 | -- | -- |
| 41.03 | 0.298 | 11.7 | 0.905 | 0.291 | 0.415 | -- | 0.0763 | 0.639 | 16.3 | 20.58 | 93 | -- | -- |
| 41.06 | 0.298 | 11.7 | 0.89 | 0.293 | 0.41 | -- | -- | 0.636 | 16.3 | 20.57 | 88 | -- | -- |
| 45.37 | 0.314 | 11.7 | 0.881 | -- | 0.477 | -- | 0.137 | 0.625 | -- | 20.51 | 95 | -- | -- |
| 47.88 | 0.324 | 11.7 | 1 | 0.37 | -- | 0.0623 | -- | 0.715 | 15.6 | -- | -- | -- | -- |
| 47.89 | 0.324 | 11.7 | 1.01 | 0.371 | -- | -- | -- | 0.716 | 15.6 | -- | -- | -- | -- |
| 45.43 | 0.314 | 11.7 | 0.877 | -- | 0.479 | -- | -- | 0.619 | -- | 20.5 | 105 | -- | -- |
| 61.2 | 0.366 | 11.7 | -- | 0.273 | 0.65 | -- | -- | 0.533 | 16.8 | 19.1 | 127 | -- | -- |
| 55.52 | 0.348 | 11.7 | 0.99 | -- | -- | -- | -- | 0.706 | -- | -- | -- | -- | -- |
| 74.56 | 0.404 | 11.7 | -- | 0.351 | -- | -- | -- | 0.604 | 15.6 | -- | -- | -- | -- |
| 63.59 | 0.371 | 11.7 | -- | -- | 0.799 | -- | -- | 0.525 | -- | 19.13 | 128 | -- | -- |
| 81.4 | 0.421 | 11.7 | -- | -- | -- | -- | -- | 0.596 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.69 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 21 |
| 4 | 37.89 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 15 |
| 6 | 38.25 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 8 |
| 12 | 39.00 | temperature | 15 | 30 | > th | dose dependent | rect. | 7 | 21 |
| 19 | 39.28 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 15 |
| 25 | 39.35 | temperature | 15 | 30 | > th | dose dependent | rect. | 7 | 19 |
| 45 | 39.86 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 15 |
| 46 | 39.88 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 10 |
| 48 | 39.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 62 | 40.17 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 12 |
| 65 | 40.19 | temperature | 20 | 90 | > th | dose independent | sin | 11 | NA |
| 84 | 40.33 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 10 |
| 85 | 40.37 | temperature | 20 | 90 | < th | dose independent | sin | 11 | NA |
| 92 | 40.40 | temperature | 20 | 10 | > th | dose independent | sin | 10 | NA |
| 109 | 40.50 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 16 |
| 117 | 40.55 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 12 |
| 142 | 40.63 | temperature | 20 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 145 | 40.64 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 13 |
| 147 | 40.64 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 19 |
| 162 | 40.68 | temperature | 20 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 185 | 40.71 | temperature | 20 | 90 | < th | dose dependent | rect. | 21 | 10 |
| 196 | 40.72 | temperature | 20 | 10 | < th | dose independent | sin | 10 | NA |
| 214 | 40.75 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 23 |
| 220 | 40.77 | temperature | 20 | 90 | < th | dose dependent | sin | 10 | NA |
| 233 | 40.80 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 15 |
| 245 | 40.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 316 | 40.89 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 23 |
| 393 | 40.96 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 21 |
| 418 | 40.98 | temperature | 20 | 90 | < th | dose dependent | rect. | 23 | 8 |
| 454 | 41.02 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 487 | 41.08 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 23 |
| 540 | 41.19 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 23 |
| 550 | 41.20 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 19 |
| 609 | 41.26 | temperature | 15 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 646 | 41.31 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 651 | 41.31 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 23 |
| 672 | 41.35 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 763 | 41.50 | temperature | 20 | 90 | < th | dose dependent | rect. | 2 | 23 |
| 772 | 41.51 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 23 |
| 773 | 41.51 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 811 | 41.55 | temperature | 20 | 10 | > th | dose independent | rect. | 13 | 23 |
| 852 | 41.61 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 23 |
| 875 | 41.65 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 878 | 41.65 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 21 |
| 881 | 41.65 | temperature | 30 | 90 | < th | dose dependent | sin | 9 | NA |
| 899 | 41.67 | temperature | 20 | 90 | < th | dose independent | rect. | 5 | 23 |
| 907 | 41.69 | temperature | 10 | 90 | > th | dose dependent | sin | 9 | NA |
| 914 | 41.70 | temperature | 20 | 10 | < th | dose independent | rect. | 8 | 23 |
| 923 | 41.71 | temperature | 20 | 90 | < th | dose dependent | rect. | 18 | 22 |
| 940 | 41.73 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 943 | 41.73 | temperature | 20 | 90 | < th | dose dependent | no | NA | NA |
| 944 | 41.73 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 956 | 41.73 | temperature | 20 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 999 | 41.77 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |