Os12g0154700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nectarin 1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]).
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Os12g0154700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nectarin 1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.67 | 0.481 | 3.16 | -0.112 | 0.109 | 0.649 | 0.266 | -3.76 | -0.111 | 9.25 | 94.33 | 185 | -- | -- |
| 108.29 | 0.485 | 3.15 | -0.139 | 0.12 | 1.46 | -0.196 | -- | -0.116 | 7.79 | 96 | 284 | -- | -- |
| 104.62 | 0.476 | 3.16 | -0.0868 | 0.0985 | 0.82 | -- | -3.88 | -0.107 | 8.98 | 94.6 | 199 | -- | -- |
| 108.3 | 0.485 | 3.15 | -0.096 | 0.111 | 1.38 | -- | -- | -0.134 | 7.18 | 96 | 284 | -- | -- |
| 105.17 | 0.478 | 3.16 | -0.0905 | -- | 0.947 | -- | -3.8 | -0.106 | -- | 94.65 | 199 | -- | -- |
| 113.4 | 0.499 | 3.16 | -0.106 | 0.157 | -- | -0.876 | -- | -0.161 | 5.05 | -- | -- | -- | -- |
| 114.93 | 0.502 | 3.16 | -0.103 | 0.176 | -- | -- | -- | -0.156 | 6.91 | -- | -- | -- | -- |
| 108.93 | 0.486 | 3.15 | -0.0818 | -- | 1.49 | -- | -- | -0.127 | -- | 95.73 | 284 | -- | -- |
| 108.49 | 0.485 | 3.15 | -- | 0.11 | 1.42 | -- | -- | -0.121 | 7.08 | 95.91 | 284 | -- | -- |
| 116.56 | 0.504 | 3.16 | -0.0996 | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
| 115.21 | 0.502 | 3.15 | -- | 0.175 | -- | -- | -- | -0.145 | 6.94 | -- | -- | -- | -- |
| 109.11 | 0.486 | 3.15 | -- | -- | 1.49 | -- | -- | -0.118 | -- | 95.77 | 284 | -- | -- |
| 116.82 | 0.504 | 3.16 | -- | -- | -- | -- | -- | -0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.65 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 97.65 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 101.15 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 4 | 101.20 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 7 | 101.27 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 9 | 101.29 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 14 | 101.34 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 15 | 101.34 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 16 | 101.35 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 9 |
| 17 | 101.36 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 19 | 101.36 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 26 | 101.41 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 28 | 101.43 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 37 | 101.48 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 60 | 101.97 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 68 | 102.06 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 80 | 102.47 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 21 | 3 |
| 85 | 102.62 | temperature | 30.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 86 | 102.63 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 94 | 103.14 | temperature | 25.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 96 | 103.20 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 110 | 103.56 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 4 |
| 114 | 103.61 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 123 | 103.79 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 126 | 103.97 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 133 | 104.09 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 141 | 104.26 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 143 | 104.32 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 145 | 104.33 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 148 | 104.46 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 150 | 104.46 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 152 | 104.46 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 203 | 104.46 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 205 | 104.46 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 207 | 104.46 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 258 | 104.48 | wind | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 289 | 104.90 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 301 | 105.02 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 303 | 105.03 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 341 | 105.33 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 343 | 105.39 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 374 | 105.69 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 7 |
| 383 | 105.76 | humidity | 80.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 389 | 105.78 | radiation | 20.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 418 | 105.86 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 1 |
| 434 | 105.94 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 462 | 106.04 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 507 | 106.31 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 512 | 106.33 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 544 | 106.52 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 590 | 106.68 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 20 | 12 |
| 593 | 106.72 | wind | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 598 | 106.72 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 609 | 106.75 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 621 | 106.77 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 627 | 106.79 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 8 |
| 637 | 106.83 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 647 | 106.88 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 697 | 106.97 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 701 | 106.97 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 13 | 15 |
| 725 | 107.05 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 730 | 107.06 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 11 |
| 731 | 107.06 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 21 | 14 |
| 783 | 107.18 | humidity | 90.0 | 270 | > th | dose dependent | sin | 14 | NA |
| 786 | 107.20 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 787 | 107.20 | atmosphere | 1005.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 798 | 107.25 | radiation | 20.0 | 10 | > th | dose independent | sin | 12 | NA |
| 835 | 107.35 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 839 | 107.36 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 23 | 9 |
| 867 | 107.43 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 871 | 107.45 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 873 | 107.45 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 5 |
| 894 | 107.45 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 5 |
| 937 | 107.49 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 948 | 107.52 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 23 | 12 |
| 956 | 107.53 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 960 | 107.54 | humidity | 80.0 | 1440 | < th | dose independent | sin | 6 | NA |
| 986 | 107.58 | radiation | 20.0 | 30 | > th | dose dependent | rect. | 15 | 17 |