Os12g0151900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0151900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.91 | 0.384 | 8.05 | -2.69 | 0.871 | 0.773 | 0.421 | 0.593 | 0.253 | 3.44 | 0.2566 | 6911 | -- | -- |
| 66.51 | 0.38 | 8.05 | -2.68 | 0.89 | 0.961 | 0.406 | -- | 0.265 | 3.46 | 0.2882 | 7450 | -- | -- |
| 67.02 | 0.381 | 8.04 | -2.64 | 0.892 | 0.852 | -- | 0.59 | 0.264 | 3.5 | 0.2021 | 7450 | -- | -- |
| 67 | 0.381 | 8.05 | -2.68 | 0.884 | 0.959 | -- | -- | 0.27 | 3.5 | 0.274 | 7450 | -- | -- |
| 109.27 | 0.487 | 8.05 | -2.62 | -- | 0.855 | -- | 0.331 | 0.292 | -- | 0.2539 | 7954 | -- | -- |
| 86.19 | 0.435 | 8.08 | -2.46 | 0.859 | -- | 0.479 | -- | 0.138 | 3.51 | -- | -- | -- | -- |
| 86.9 | 0.437 | 8.08 | -2.47 | 0.861 | -- | -- | -- | 0.135 | 3.51 | -- | -- | -- | -- |
| 107.7 | 0.483 | 8.05 | -2.6 | -- | 0.969 | -- | -- | 0.315 | -- | 0.338 | 13825 | -- | -- |
| 232.98 | 0.711 | 8 | -- | 0.874 | 0.719 | -- | -- | 0.561 | 3.52 | -8.072e-07 | 13444 | -- | -- |
| 128.37 | 0.529 | 8.08 | -2.43 | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
| 247.55 | 0.736 | 8.02 | -- | 0.813 | -- | -- | -- | 0.41 | 3.52 | -- | -- | -- | -- |
| 270.29 | 0.766 | 7.99 | -- | -- | 0.698 | -- | -- | 0.589 | -- | -0.05676 | 13458 | -- | -- |
| 284.47 | 0.787 | 8.02 | -- | -- | -- | -- | -- | 0.428 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.57 | wind | 3.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 2 | 64.65 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 5 | 64.75 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 8 | 64.88 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 9 | 64.88 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 20 | 16 |
| 10 | 64.89 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 2 |
| 11 | 64.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 12 | 64.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 5 |
| 14 | 64.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 16 | 64.97 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 17 | 65.01 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 19 | 65.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 18 |
| 20 | 65.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 22 |
| 27 | 65.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 14 |
| 34 | 65.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 35 | 65.15 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 37 | 65.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 10 |
| 38 | 65.15 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 13 |
| 46 | 65.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 13 |
| 49 | 65.21 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 16 |
| 53 | 65.23 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 16 | NA |
| 56 | 65.23 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 20 | 13 |
| 74 | 65.26 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 12 |
| 82 | 65.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 86 | 65.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 11 |
| 94 | 65.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 17 |
| 97 | 65.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 17 |
| 102 | 65.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 17 |
| 109 | 65.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 122 | 65.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 9 |
| 125 | 65.35 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 20 | 11 |
| 127 | 65.35 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 17 |
| 177 | 65.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 220 | 65.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 228 | 65.49 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 257 | 65.53 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 261 | 65.54 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 22 | NA |
| 262 | 65.54 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 22 | NA |
| 265 | 65.54 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 22 | NA |
| 283 | 65.58 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 289 | 65.58 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 3 | 8 |
| 292 | 65.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 22 |
| 321 | 65.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 20 |
| 373 | 65.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 375 | 65.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 10 |
| 394 | 65.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 427 | 65.82 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 465 | 65.90 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 468 | 65.90 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 483 | 65.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 520 | 66.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 529 | 66.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 531 | 66.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 559 | 66.09 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 611 | 66.18 | wind | 5.0 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 649 | 66.23 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 677 | 66.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 16 |
| 688 | 66.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 16 |
| 692 | 66.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 16 |
| 700 | 66.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 701 | 66.29 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 727 | 66.33 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 10 |
| 755 | 66.43 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 765 | 66.46 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 780 | 66.49 | wind | 5.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 789 | 66.52 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 5 |
| 845 | 66.68 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 857 | 66.71 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 902 | 66.85 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 912 | 66.86 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 18 |
| 916 | 66.88 | wind | 1.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 956 | 66.95 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 1000 | 67.01 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 13 |