Os12g0148700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0148700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 243.66 | 0.733 | 3.24 | 0.753 | 0.745 | -0.587 | 1.64 | 0.244 | 0.612 | 22 | 87.49 | 688 | -- | -- |
| 243.79 | 0.727 | 3.24 | 0.735 | 0.743 | -0.585 | 1.75 | -- | 0.609 | 21.9 | 87.65 | 685 | -- | -- |
| 251.16 | 0.738 | 3.25 | 0.842 | 0.748 | -0.558 | -- | 1.33 | 0.626 | 22.5 | 86 | 779 | -- | -- |
| 255.25 | 0.744 | 3.24 | 0.712 | 0.732 | -0.581 | -- | -- | 0.576 | 21.9 | 85 | 676 | -- | -- |
| 270.95 | 0.771 | 3.23 | 0.716 | -- | -0.192 | -- | -0.349 | 0.547 | -- | 84.78 | 1583 | -- | -- |
| 252.12 | 0.744 | 3.25 | 0.805 | 0.454 | -- | 1.7 | -- | 0.534 | 22.5 | -- | -- | -- | -- |
| 263.47 | 0.76 | 3.25 | 0.734 | 0.448 | -- | -- | -- | 0.527 | 23.2 | -- | -- | -- | -- |
| 269.42 | 0.764 | 3.22 | 0.698 | -- | -0.679 | -- | -- | 0.588 | -- | 84 | 1609 | -- | -- |
| 267.08 | 0.761 | 3.26 | -- | 0.768 | -0.648 | -- | -- | 0.541 | 21.9 | 87.94 | 644 | -- | -- |
| 276 | 0.776 | 3.24 | 0.745 | -- | -- | -- | -- | 0.531 | -- | -- | -- | -- | -- |
| 277.68 | 0.779 | 3.27 | -- | 0.455 | -- | -- | -- | 0.446 | 23.3 | -- | -- | -- | -- |
| 279.57 | 0.779 | 3.23 | -- | -- | -0.801 | -- | -- | 0.556 | -- | 88.97 | 1593 | -- | -- |
| 290.64 | 0.796 | 3.26 | -- | -- | -- | -- | -- | 0.449 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 239.02 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 2 | 239.08 | humidity | 50.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 94 | 239.08 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 187 | 239.70 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 188 | 239.71 | humidity | 90.0 | 720 | > th | dose independent | rect. | 19 | 4 |
| 189 | 239.73 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 191 | 239.92 | humidity | 90.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 192 | 239.93 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 198 | 240.10 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 211 | 240.45 | humidity | 80.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 216 | 240.57 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 15 | 11 |
| 227 | 240.71 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 14 | 16 |
| 230 | 240.72 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 231 | 240.73 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 12 | 18 |
| 232 | 240.74 | wind | 1.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 254 | 240.92 | humidity | 80.0 | 720 | > th | dose independent | rect. | 15 | 7 |
| 274 | 241.08 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 292 | 241.23 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 21 | 6 |
| 294 | 241.23 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 311 | 241.39 | humidity | 80.0 | 720 | > th | dose independent | rect. | 15 | 15 |
| 313 | 241.40 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 7 | 11 |
| 326 | 241.44 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 349 | 241.56 | humidity | 80.0 | 720 | > th | dose independent | rect. | 12 | 18 |
| 388 | 241.80 | humidity | 80.0 | 720 | > th | dose independent | sin | 15 | NA |
| 400 | 241.84 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 442 | 242.05 | humidity | 80.0 | 720 | > th | dose independent | rect. | 12 | 14 |
| 464 | 242.14 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 492 | 242.24 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 519 | 242.41 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 531 | 242.44 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 10 | 17 |
| 588 | 242.61 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 612 | 242.69 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 632 | 242.77 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 691 | 242.95 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 710 | 242.99 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 7 |
| 715 | 243.01 | radiation | 30.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 720 | 243.02 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 721 | 243.02 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 1 |
| 725 | 243.02 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 738 | 243.08 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 10 | 13 |
| 739 | 243.09 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 744 | 243.10 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 7 | 21 |
| 760 | 243.15 | humidity | 80.0 | 720 | < th | dose independent | rect. | 12 | 10 |
| 776 | 243.19 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 22 | 4 |
| 778 | 243.19 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 22 | 4 |
| 784 | 243.20 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 792 | 243.21 | humidity | 80.0 | 720 | < th | dose independent | rect. | 12 | 13 |
| 807 | 243.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 811 | 243.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 4 |
| 820 | 243.26 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 853 | 243.30 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 23 | 18 |
| 854 | 243.30 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 855 | 243.30 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 3 |
| 865 | 243.32 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 879 | 243.34 | humidity | 50.0 | 30 | > th | dose independent | rect. | 7 | 22 |
| 881 | 243.35 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 884 | 243.35 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 8 | 4 |
| 887 | 243.36 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 12 |
| 903 | 243.38 | radiation | 10.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 936 | 243.43 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 10 | 10 |
| 943 | 243.44 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 23 | 18 |
| 958 | 243.46 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 962 | 243.46 | humidity | 90.0 | 720 | < th | dose independent | rect. | 3 | 21 |
| 963 | 243.46 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 980 | 243.49 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 985 | 243.49 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 16 | 23 |
| 988 | 243.50 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 1 |