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Os12g0148600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.07 (0.0342) R2 : 0.523
β1 : 0.804 (0.125) R2dD : 0.0447 R2D : 0.0403
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.98 (0.0957) R2dE : 0.448 R2E : 0.45
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.406 (0.073) R2dN8 : 0.0433 R2N8 : 0.0104
σ : 0.639
deviance : 188.5
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 8.525
memory length : 10
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 9.22
open length of G : 17.7

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
184.64 0.638 7.07 0.806 0.214 1.88 -0.206 -0.792 0.404 13 7.928 12 9.15 17.7
185.49 0.634 7.07 0.847 0.205 1.88 -0.407 -- 0.396 13.2 7.369 11 9.14 17.7
184.63 0.633 7.07 0.818 0.226 1.85 -- -0.973 0.405 13.3 6.974 14 9.12 17.7
186.04 0.635 7.06 0.859 0.247 1.8 -- -- 0.424 13.3 5.723 14 9.15 17.7
187.15 0.637 7.07 0.771 -- 2 -- -0.862 0.397 -- 8.693 10 9.22 17.7
240.58 0.727 7.08 1.03 1.53 -- 0.0162 -- 0.414 16.6 -- -- -- --
240.59 0.726 7.08 1.03 1.53 -- -- -- 0.414 16.6 -- -- -- --
188.5 0.639 7.07 0.804 -- 1.98 -- -- 0.406 -- 8.525 10 9.22 17.7
203.84 0.665 7.09 -- 0.136 2.02 -- -- 0.303 10 9.644 14 9.05 17.8
364.84 0.893 7.07 0.973 -- -- -- -- 0.374 -- -- -- -- --
268.66 0.767 7.11 -- 1.51 -- -- -- 0.299 16.6 -- -- -- --
204.41 0.666 7.1 -- -- 2.09 -- -- 0.281 -- 11.13 13 9 17.8
389.81 0.922 7.1 -- -- -- -- -- 0.266 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 186.49 temperature 10.0 10 > th dose dependent rect. 9 17
4 188.67 temperature 15.0 270 > th dose dependent rect. 9 1
12 194.01 temperature 15.0 10 > th dose dependent rect. 9 5
13 194.05 temperature 10.0 10 > th dose dependent rect. 9 15
46 199.45 wind 5.0 30 < th dose independent rect. 2 7
54 199.95 precipitation 0.1 10 < th dose independent rect. 2 7
55 199.95 precipitation 0.1 10 < th dose dependent rect. 2 7
62 200.14 temperature 10.0 270 > th dose dependent rect. 6 7
65 200.59 temperature 15.0 30 > th dose independent rect. 9 17
68 200.79 wind 9.0 10 < th dose independent rect. 9 17
76 201.08 temperature 10.0 1440 > th dose independent rect. 3 7
79 201.08 atmosphere 995.0 1440 > th dose independent rect. 3 7
80 201.08 temperature 10.0 1440 > th dose independent rect. 10 17
83 201.10 precipitation 0.1 10 < th dose independent rect. 9 17
85 201.10 precipitation 0.1 10 < th dose dependent rect. 9 17
88 201.13 temperature 10.0 30 > th dose independent rect. 2 7
90 201.13 temperature 30.0 30 < th dose independent rect. 2 7
91 201.13 humidity 50.0 30 > th dose independent rect. 2 7
93 201.13 atmosphere 995.0 30 > th dose independent rect. 2 7
94 201.13 atmosphere 1015.0 30 < th dose independent rect. 2 7
118 201.79 humidity 90.0 270 < th dose independent rect. 9 1
121 201.97 humidity 90.0 10 < th dose independent rect. 9 6
122 202.05 radiation 40.0 30 < th dose independent rect. 2 7
126 202.07 atmosphere 995.0 30 > th dose independent rect. 9 17
127 202.14 temperature 10.0 270 > th dose dependent rect. 20 15
160 202.75 temperature 10.0 43200 > th dose independent rect. 10 6
171 203.07 temperature 15.0 270 > th dose independent rect. 9 1
172 203.12 atmosphere 1015.0 30 < th dose dependent rect. 2 7
179 203.28 radiation 1.0 270 > th dose independent rect. 9 1
185 203.43 temperature 20.0 10 > th dose independent rect. 9 6
188 203.45 atmosphere 1015.0 90 < th dose dependent rect. 3 5
207 204.01 temperature 10.0 30 > th dose dependent rect. 2 7
210 204.04 humidity 50.0 30 > th dose independent rect. 9 17
213 204.11 wind 9.0 270 < th dose dependent rect. 9 1
222 204.48 wind 9.0 30 < th dose dependent rect. 2 7
229 204.58 atmosphere 1015.0 1440 < th dose independent rect. 4 6
239 204.81 humidity 50.0 10 > th dose independent rect. 9 6
240 204.84 wind 5.0 270 < th dose independent rect. 9 1
257 205.03 temperature 10.0 270 > th dose dependent rect. 6 19
261 205.12 wind 9.0 10 < th dose independent rect. 9 6
282 205.80 temperature 10.0 10 > th dose independent rect. 9 6
284 205.80 atmosphere 995.0 10 > th dose independent rect. 9 6
285 205.80 atmosphere 1015.0 10 < th dose independent rect. 9 6
286 205.80 precipitation 0.1 10 < th dose independent rect. 9 6
287 205.80 atmosphere 1015.0 30 < th dose independent rect. 9 17
288 205.80 temperature 10.0 10 > th dose independent rect. 15 18
289 205.80 precipitation 0.1 10 < th dose dependent rect. 9 6
290 205.81 precipitation 0.1 270 < th dose independent rect. 9 1
291 205.81 precipitation 0.1 270 < th dose dependent rect. 9 1
303 205.87 humidity 50.0 270 > th dose independent rect. 9 1
304 205.87 precipitation 0.1 10 < th dose independent rect. 15 18
305 205.87 precipitation 0.1 10 < th dose dependent rect. 15 18
309 205.94 wind 9.0 10 < th dose independent rect. 15 18
334 206.19 atmosphere 995.0 270 > th dose independent rect. 9 1
335 206.19 atmosphere 1015.0 270 < th dose independent rect. 9 1
336 206.19 temperature 10.0 270 > th dose independent rect. 10 23
337 206.19 atmosphere 1015.0 270 < th dose dependent rect. 3 2
338 206.23 temperature 10.0 1440 > th dose independent rect. 10 6
341 206.23 temperature 10.0 1440 > th dose independent rect. 16 18
352 206.34 radiation 40.0 10 < th dose independent rect. 12 21
353 206.35 radiation 1.0 10 > th dose independent rect. 9 6
411 206.85 temperature 30.0 90 < th dose dependent rect. 3 16
416 206.91 wind 1.0 270 > th dose independent rect. 9 1
433 207.27 radiation 40.0 10 < th dose independent rect. 15 18
434 207.31 wind 1.0 30 > th dose independent rect. 9 6
482 207.98 wind 9.0 30 < th dose dependent rect. 9 6
488 208.06 humidity 50.0 10 > th dose independent rect. 15 18
500 208.16 atmosphere 995.0 10 > th dose independent rect. 15 18
502 208.18 wind 5.0 270 < th dose independent rect. 3 2
508 208.29 atmosphere 1015.0 10 < th dose independent rect. 15 18
516 208.38 precipitation 0.1 270 < th dose independent rect. 10 23
519 208.38 precipitation 0.1 270 < th dose dependent rect. 10 23
557 208.81 wind 9.0 10 < th dose dependent rect. 15 18
604 209.21 wind 1.0 30 > th dose independent rect. 2 7
608 209.24 wind 9.0 270 < th dose dependent rect. 6 7
627 209.36 precipitation 0.1 270 < th dose independent rect. 3 2
628 209.36 precipitation 0.1 270 < th dose dependent rect. 3 2
700 209.94 wind 1.0 30 > th dose independent rect. 9 18
724 210.15 wind 9.0 270 < th dose independent rect. 5 22
749 210.28 temperature 15.0 10 > th dose dependent rect. 20 19
763 210.38 radiation 1.0 270 < th dose dependent rect. 3 2
764 210.39 temperature 15.0 270 > th dose independent rect. 5 22
790 210.57 temperature 10.0 270 > th dose independent rect. 3 2
792 210.57 temperature 30.0 270 < th dose independent rect. 3 2
793 210.57 humidity 50.0 270 > th dose independent rect. 3 2
796 210.57 atmosphere 995.0 270 > th dose independent rect. 3 2
797 210.57 atmosphere 1010.0 270 < th dose independent rect. 3 2
799 210.57 radiation 20.0 270 < th dose independent rect. 3 2
807 210.62 radiation 40.0 270 < th dose dependent rect. 3 2
810 210.65 temperature 15.0 270 > th dose independent rect. 6 7
822 210.77 wind 9.0 270 < th dose dependent rect. 3 2
824 210.78 radiation 1.0 270 < th dose independent rect. 3 2
828 210.78 wind 9.0 30 < th dose dependent rect. 9 17
832 210.81 wind 9.0 270 < th dose independent rect. 10 23
842 210.89 temperature 15.0 270 > th dose independent rect. 6 19
843 210.90 atmosphere 995.0 30 > th dose dependent rect. 2 7
856 211.02 precipitation 0.1 1440 < th dose independent rect. 10 2
857 211.02 precipitation 0.1 1440 < th dose dependent rect. 10 2
874 211.09 temperature 30.0 270 < th dose dependent rect. 3 2
884 211.20 radiation 1.0 270 > th dose dependent rect. 9 1
898 211.25 humidity 50.0 4320 > th dose independent rect. 3 7
906 211.32 wind 7.0 270 < th dose independent rect. 6 7
921 211.42 wind 5.0 10 < th dose independent rect. 24 9
957 211.61 temperature 30.0 10 < th dose independent rect. 11 22