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Os12g0148400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.91 (0.0242) R2 : 0.458
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.545 (0.0582) R2dC : 0.104 R2C : 0.0104
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.869 (0.0508) R2dN8 : 0.448 R2N8 : 0.354
σ : 0.456
deviance : 94.87
__
_____
C
peak time of C : 13.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
77.62 0.414 9.81 0.802 0.463 -0.937 0.0777 1.99 -0.581 13.4 9.013 1279 -- --
80.86 0.419 9.87 0.368 0.454 -0.904 -0.0756 -- -0.699 13.3 13 1253 -- --
77.65 0.41 9.81 0.8 0.465 -0.936 -- 1.96 -0.582 13.4 9.118 1286 -- --
80.86 0.419 9.87 0.376 0.448 -0.916 -- -- -0.698 13.5 13.1 1246 -- --
88.33 0.438 9.82 0.845 -- -1.14 -- 2.05 -0.556 -- 14.81 1111 -- --
94.63 0.456 9.9 0.0965 0.547 -- -0.051 -- -0.858 13.5 -- -- -- --
94.64 0.456 9.9 0.0948 0.546 -- -- -- -0.858 13.5 -- -- -- --
91.12 0.445 9.86 0.434 -- -1.12 -- -- -0.674 -- 14.57 1069 -- --
84.06 0.427 9.88 -- 0.459 -0.76 -- -- -0.759 13.5 12.42 1244 -- --
112.94 0.497 9.91 0.073 -- -- -- -- -0.87 -- -- -- -- --
94.87 0.456 9.91 -- 0.545 -- -- -- -0.869 13.5 -- -- -- --
94.96 0.454 9.88 -- -- -0.978 -- -- -0.741 -- 14.08 1080 -- --
113.08 0.496 9.91 -- -- -- -- -- -0.878 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.71 temperature 30.0 270 < th dose dependent rect. 6 18
3 67.27 temperature 25.0 270 < th dose independent rect. 1 4
9 68.47 temperature 10.0 270 > th dose dependent rect. 1 17
10 68.62 temperature 25.0 270 < th dose independent rect. 24 6
11 68.66 temperature 15.0 270 > th dose independent rect. 1 16
16 68.90 temperature 10.0 270 > th dose dependent rect. 11 9
17 69.01 atmosphere 1010.0 270 < th dose independent rect. 24 6
18 69.01 wind 9.0 270 < th dose independent rect. 6 18
19 69.02 radiation 10.0 270 < th dose independent rect. 1 5
20 69.02 atmosphere 995.0 270 > th dose independent rect. 1 16
21 69.03 temperature 15.0 270 > th dose independent rect. 24 6
25 69.04 humidity 50.0 270 > th dose independent rect. 24 6
28 69.04 atmosphere 995.0 270 > th dose independent rect. 24 6
32 69.04 temperature 10.0 270 > th dose independent rect. 6 18
33 69.05 wind 9.0 270 < th dose independent rect. 24 6
36 69.08 precipitation 0.1 270 < th dose independent rect. 24 6
37 69.08 precipitation 0.1 270 < th dose dependent rect. 24 6
51 69.10 radiation 30.0 270 < th dose dependent rect. 1 5
66 69.38 wind 9.0 270 < th dose independent rect. 17 8
67 69.38 temperature 20.0 270 > th dose independent rect. 11 8
69 69.41 precipitation 0.1 270 < th dose independent rect. 17 8
70 69.41 precipitation 0.1 270 < th dose dependent rect. 17 8
71 69.43 precipitation 0.1 270 < th dose independent rect. 6 18
72 69.43 precipitation 0.1 270 < th dose dependent rect. 6 18
73 69.46 precipitation 0.1 270 < th dose independent rect. 1 16
74 69.46 precipitation 0.1 270 < th dose dependent rect. 1 16
78 69.54 humidity 50.0 270 > th dose dependent rect. 24 6
79 69.56 temperature 10.0 270 > th dose independent rect. 17 8
80 69.56 radiation 20.0 270 < th dose independent rect. 17 8
84 69.56 atmosphere 1015.0 270 < th dose independent rect. 1 16
88 69.65 atmosphere 1010.0 270 < th dose independent rect. 11 9
90 69.67 radiation 40.0 270 < th dose dependent rect. 17 8
91 69.68 temperature 10.0 270 > th dose dependent rect. 11 19
98 69.78 humidity 50.0 270 > th dose independent rect. 17 8
102 69.86 wind 9.0 270 < th dose independent rect. 1 16
109 69.94 radiation 1.0 270 < th dose dependent rect. 6 19
115 70.10 atmosphere 1010.0 270 < th dose independent rect. 11 19
129 70.32 radiation 20.0 270 < th dose dependent rect. 15 10
130 70.33 radiation 1.0 270 < th dose independent rect. 8 17
153 70.37 atmosphere 995.0 270 > th dose independent rect. 17 8
156 70.40 radiation 1.0 270 < th dose dependent rect. 16 9
158 70.41 temperature 15.0 270 > th dose independent rect. 12 18
169 70.52 radiation 1.0 270 < th dose independent rect. 15 10
213 70.88 wind 1.0 270 > th dose independent rect. 17 8
222 70.95 wind 9.0 270 < th dose dependent rect. 1 5
232 71.05 atmosphere 1010.0 30 < th dose independent rect. 14 17
234 71.06 wind 1.0 270 > th dose independent rect. 6 18
243 71.15 wind 7.0 270 < th dose independent rect. 19 16
292 71.38 atmosphere 995.0 270 > th dose independent rect. 12 18
317 71.58 temperature 10.0 270 > th dose independent rect. 6 6
318 71.58 atmosphere 995.0 270 > th dose independent rect. 6 6
319 71.58 atmosphere 1015.0 270 < th dose independent rect. 6 6
325 71.63 atmosphere 1015.0 270 < th dose dependent rect. 1 4
335 71.67 precipitation 0.1 270 < th dose independent rect. 6 6
337 71.67 precipitation 0.1 270 < th dose dependent rect. 6 6
340 71.69 temperature 15.0 10 > th dose independent rect. 14 17
355 71.73 temperature 10.0 270 > th dose independent rect. 19 16
356 71.73 atmosphere 995.0 270 > th dose independent rect. 19 16
359 71.75 temperature 10.0 270 > th dose dependent rect. 1 5
365 71.79 wind 9.0 270 < th dose independent rect. 6 6
374 71.84 atmosphere 995.0 270 > th dose independent rect. 11 8
376 71.85 temperature 10.0 270 > th dose independent rect. 5 8
377 71.85 atmosphere 995.0 270 > th dose independent rect. 5 8
378 71.85 atmosphere 1015.0 270 < th dose independent rect. 5 8
390 71.94 precipitation 0.1 270 < th dose independent rect. 5 8
392 71.94 precipitation 0.1 270 < th dose dependent rect. 5 8
402 71.97 wind 1.0 270 > th dose independent rect. 11 8
403 71.97 atmosphere 995.0 270 > th dose independent rect. 13 16
410 72.01 humidity 50.0 270 > th dose independent rect. 19 16
413 72.02 humidity 90.0 270 < th dose independent rect. 11 8
414 72.02 precipitation 0.1 270 < th dose independent rect. 11 8
416 72.02 precipitation 0.1 270 < th dose dependent rect. 11 8
419 72.04 precipitation 0.1 270 < th dose independent rect. 12 18
420 72.04 temperature 10.0 10 > th dose dependent rect. 14 17
421 72.04 precipitation 0.1 270 < th dose dependent rect. 12 18
422 72.05 humidity 50.0 270 > th dose independent rect. 6 6
433 72.09 temperature 30.0 270 < th dose independent rect. 6 6
443 72.13 humidity 50.0 270 > th dose independent rect. 6 18
446 72.14 precipitation 0.1 270 < th dose independent rect. 19 16
447 72.14 temperature 10.0 90 > th dose dependent rect. 14 16
448 72.14 precipitation 0.1 270 < th dose dependent rect. 19 16
454 72.17 wind 9.0 270 < th dose independent rect. 5 8
473 72.20 wind 9.0 270 < th dose independent rect. 12 18
476 72.21 atmosphere 995.0 270 > th dose independent rect. 6 18
494 72.31 wind 9.0 270 < th dose independent rect. 11 8
503 72.37 wind 9.0 270 < th dose independent rect. 2 2
504 72.37 temperature 10.0 270 > th dose independent rect. 2 2
507 72.37 humidity 50.0 270 > th dose independent rect. 2 2
510 72.37 atmosphere 995.0 270 > th dose independent rect. 2 2
511 72.37 atmosphere 1010.0 270 < th dose independent rect. 2 2
513 72.37 radiation 1.0 270 < th dose independent rect. 2 2
518 72.37 precipitation 0.1 270 < th dose independent rect. 2 2
520 72.37 temperature 10.0 270 > th dose independent rect. 4 22
521 72.37 radiation 1.0 270 < th dose dependent rect. 2 2
526 72.37 precipitation 0.1 270 < th dose dependent rect. 2 2
555 72.52 temperature 30.0 270 < th dose independent rect. 19 16
566 72.54 atmosphere 995.0 10 > th dose independent rect. 14 17
567 72.54 radiation 40.0 270 < th dose independent rect. 6 19
583 72.56 wind 9.0 270 < th dose independent rect. 13 16
585 72.56 wind 9.0 270 < th dose independent rect. 4 22
592 72.60 temperature 30.0 270 < th dose independent rect. 18 7
595 72.60 precipitation 0.1 270 < th dose independent rect. 13 16
598 72.60 wind 9.0 270 < th dose dependent rect. 17 8
599 72.60 precipitation 0.1 270 < th dose dependent rect. 13 16
645 72.72 humidity 50.0 270 > th dose dependent rect. 6 19
646 72.72 radiation 40.0 270 < th dose dependent rect. 6 19
647 72.74 wind 1.0 270 > th dose independent rect. 5 7
755 73.01 humidity 50.0 270 > th dose dependent rect. 2 2
760 73.02 precipitation 0.1 10 < th dose independent rect. 14 17
762 73.02 humidity 70.0 270 > th dose independent rect. 6 19
764 73.02 precipitation 0.1 10 < th dose dependent rect. 14 17
784 73.06 precipitation 0.1 270 < th dose independent rect. 4 22
789 73.06 precipitation 0.1 270 < th dose dependent rect. 4 22
808 73.10 radiation 40.0 90 < th dose independent rect. 14 16
825 73.12 radiation 40.0 270 < th dose independent rect. 7 17
829 73.13 precipitation 0.1 10 < th dose independent rect. 7 7
831 73.13 precipitation 0.1 10 < th dose dependent rect. 7 7
834 73.14 radiation 40.0 10 < th dose independent rect. 14 17
856 73.19 temperature 10.0 10 > th dose independent rect. 7 7
858 73.19 atmosphere 995.0 10 > th dose independent rect. 7 7
859 73.19 atmosphere 1015.0 10 < th dose independent rect. 7 7
909 73.30 wind 9.0 270 < th dose dependent rect. 6 18
935 73.40 radiation 1.0 10 > th dose independent rect. 7 7
941 73.41 wind 1.0 270 > th dose independent rect. 2 2
942 73.41 temperature 30.0 270 < th dose dependent rect. 1 4
975 73.48 wind 9.0 10 < th dose independent rect. 14 17
986 73.50 radiation 1.0 270 > th dose independent rect. 6 6